RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 HCRTO43612 131 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 LRCH4O75427 683 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 TOM1L1O75674 476 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 DDNO94850 711 aaPredicted RBP6.68□□□□□ -1.34
CHD6-202ENST00000373222 ERBB2P04626 1255 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 RBP3P10745 1247 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 MYCLP1P12525 358 aaPredicted RBP6.68□□□□□ -1.34
CHD6-202ENST00000373222 EPB42P16452 691 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 RPS12P25398 132 aaKnown RBP6.68□□□□□ -1.34
CHD6-202ENST00000373222 ICAM3P32942 547 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 RPA3P35244 121 aaPredicted RBP6.68□□□□□ -1.34
CHD6-202ENST00000373222 GPX6P59796 221 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 BPIFB4P59827 614 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 ELF3P78545 371 aaPredicted RBP6.68□□□□□ -1.34
CHD6-202ENST00000373222 OTUD4Q01804 1114 aaKnown RBP6.68□□□□□ -1.34
CHD6-202ENST00000373222 TCEA2Q15560 299 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 TAF1CQ15572 869 aaPredicted RBP6.68□□□□□ -1.34
CHD6-202ENST00000373222 OASLQ15646 514 aaKnown RBP6.68□□□□□ -1.34
CHD6-202ENST00000373222 LACTB2Q53H82 288 aaPredicted RBP6.68□□□□□ -1.34
CHD6-202ENST00000373222 ALFQ53S48 1182 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 LYPD8Q6UX82 237 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 TAOK1Q7L7X3 1001 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 PNMA8AQ86V59 439 aaPredicted RBP6.68□□□□□ -1.34
CHD6-202ENST00000373222 ERICH1Q86X53 443 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 CEP57Q86XR8 500 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 IGDCC3Q8IVU1 814 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 UNC45BQ8IWX7 931 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 ALLCQ8N6M5 410 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 NETO2Q8NC67 525 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 UBA3Q8TBC4 463 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 ACTL9Q8TC94 416 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 CHAC2Q8WUX2 184 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 MAML1Q92585 1016 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 PEBP4Q96S96 227 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 TRIM56Q9BRZ2 755 aaKnown RBP6.68□□□□□ -1.34
CHD6-202ENST00000373222 SPATC1LQ9H0A9 340 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 CDH19Q9H159 772 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 VPS33BQ9H267 617 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 VPS37BQ9H9H4 285 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 MRPL47Q9HD33 250 aaKnown RBP6.68□□□□□ -1.34
CHD6-202ENST00000373222 ALG13Q9NP73 1137 aaKnown RBP6.68□□□□□ -1.34
CHD6-202ENST00000373222 GPRC5DQ9NZD1 345 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 GGA2Q9UJY4 613 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 CPSF3Q9UKF6 684 aaKnown RBP6.68□□□□□ -1.34
CHD6-202ENST00000373222 SLC12A4Q9UP95 1085 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 L3MBTL1Q9Y468 752 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 NR2E3Q9Y5X4 410 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 CLUHO75153 1309 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 WDR91A4D1P6 747 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 PRRT4C9JH25 899 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 DNALI1O14645 258 aaPredicted RBP6.68□□□□□ -1.34
CHD6-202ENST00000373222 CST8O60676 142 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 DKC1O60832 514 aaKnown RBP eCLIP6.68□□□□□ -1.34
CHD6-202ENST00000373222 AVILO75366 819 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 CNMDO75829 334 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 TMEM63AO94886 807 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 VTNP04004 478 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 ITGB3P05106 788 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 TAC1P20366 129 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 PSMA2P25787 234 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 GBP1P32455 592 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 STX2P32856 288 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 BAG6P46379 1132 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 NEK2P51955 445 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 NCALDP61601 193 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 SLC25A11Q02978 314 aaKnown RBP6.68□□□□□ -1.34
CHD6-202ENST00000373222 RNASELQ05823 741 aaKnown RBP6.68□□□□□ -1.34
CHD6-202ENST00000373222 PDIA2Q13087 525 aaKnown RBP6.68□□□□□ -1.34
CHD6-202ENST00000373222 TFDP1Q14186 410 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 PLCB4Q15147 1175 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 SLC1A5Q15758 541 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 CDO1Q16878 200 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 C15orf59Q2T9L4 293 aaPredicted RBP6.68□□□□□ -1.34
CHD6-202ENST00000373222 ACCSLQ4AC99 568 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 TM4SF20Q53R12 229 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 ARMC3Q5W041 872 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 SLFN12LQ6IEE8 588 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 KIRREL3Q8IZU9 778 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 ZCCHC9Q8N567 271 aaKnown RBP6.68□□□□□ -1.34
CHD6-202ENST00000373222 C12orf29Q8N999 325 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 C1orf127Q8N9H9 656 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 GRK7Q8WTQ7 553 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 CKAP2Q8WWK9 683 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 HSPH1Q92598 858 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 TRIM11Q96F44 468 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 FAM81BQ96LP2 452 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 GPR20Q99678 358 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 MAK16Q9BXY0 300 aaKnown RBP6.68□□□□□ -1.34
CHD6-202ENST00000373222 ROPN1BQ9BZX4 212 aaPredicted RBP6.68□□□□□ -1.34
CHD6-202ENST00000373222 CCDC134Q9H6E4 229 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 ROPN1Q9HAT0 212 aaPredicted RBP6.68□□□□□ -1.34
CHD6-202ENST00000373222 IP6K2Q9UHH9 426 aa6.68□□□□□ -1.34
CHD6-202ENST00000373222 OGTO15294 1046 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 PDPK1O15530 556 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 CYP3A5P20815 502 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 COL9A1P20849 921 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 EDNRBP24530 442 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 TBXAS1P24557 533 aaPredicted RBP6.67□□□□□ -1.34
CHD6-202ENST00000373222 RAD23BP54727 409 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 LACTBP83111 547 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms