RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 CCDC160A6NGH7 325 aa9.21□□□□□ -0.94
ATG4A-203ENST00000372232 PFDN6O15212 129 aa9.21□□□□□ -0.94
ATG4A-203ENST00000372232 MAGEB2O15479 319 aa9.21□□□□□ -0.94
ATG4A-203ENST00000372232 LILRA1O75019 489 aa9.21□□□□□ -0.94
ATG4A-203ENST00000372232 ZWINTO95229 277 aa9.21□□□□□ -0.94
ATG4A-203ENST00000372232 CLPTM1O96005 669 aa9.21□□□□□ -0.94
ATG4A-203ENST00000372232 HMOX2P30519 316 aa9.21□□□□□ -0.94
ATG4A-203ENST00000372232 PHKA2P46019 1235 aa9.21□□□□□ -0.94
ATG4A-203ENST00000372232 DNA2P51530 1060 aa9.21□□□□□ -0.94
ATG4A-203ENST00000372232 PSMC6P62333 389 aa9.21□□□□□ -0.94
ATG4A-203ENST00000372232 POU5F1Q01860 360 aaKnown RBP9.21□□□□□ -0.94
ATG4A-203ENST00000372232 CRY1Q16526 586 aa9.21□□□□□ -0.94
ATG4A-203ENST00000372232 TTC23LQ6PF05 361 aa9.21□□□□□ -0.94
ATG4A-203ENST00000372232 ELMSAN1Q6PJG2 1045 aa9.21□□□□□ -0.94
ATG4A-203ENST00000372232 ADGRG6Q86SQ4 1221 aa9.21□□□□□ -0.94
ATG4A-203ENST00000372232 TTLL6Q8N841 843 aa9.21□□□□□ -0.94
ATG4A-203ENST00000372232 MRPS26Q9BYN8 205 aaKnown RBP9.21□□□□□ -0.94
ATG4A-203ENST00000372232 OSBPL6Q9BZF3 934 aa9.21□□□□□ -0.94
ATG4A-203ENST00000372232 TBC1D23Q9NUY8 699 aa9.21□□□□□ -0.94
ATG4A-203ENST00000372232 NDE1Q9NXR1 346 aa9.21□□□□□ -0.94
ATG4A-203ENST00000372232 AMACRQ9UHK6 382 aa9.21□□□□□ -0.94
ATG4A-203ENST00000372232 TSR3Q9UJK0 312 aaKnown RBP9.21□□□□□ -0.94
ATG4A-203ENST00000372232 GTF3C4Q9UKN8 822 aa9.21□□□□□ -0.94
ATG4A-203ENST00000372232 VAV3Q9UKW4 847 aa9.21□□□□□ -0.94
ATG4A-203ENST00000372232 DNM3Q9UQ16 869 aa9.21□□□□□ -0.94
ATG4A-203ENST00000372232 ARFGEF1Q9Y6D6 1849 aa9.21□□□□□ -0.94
ATG4A-203ENST00000372232 CNTNAP1P78357 1384 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 MEIS1O00470 390 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 ADCY6O43306 1168 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 GAS8O95995 478 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 KRT18P05783 430 aaKnown RBP9.2□□□□□ -0.94
ATG4A-203ENST00000372232 POU3F3P20264 500 aaPredicted RBP9.2□□□□□ -0.94
ATG4A-203ENST00000372232 PRKACBP22694 351 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 GFPT1Q06210 699 aaPredicted RBP9.2□□□□□ -0.94
ATG4A-203ENST00000372232 PDK3Q15120 406 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 SLC45A4Q5BKX6 768 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 FAM83BQ5T0W9 1011 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 MAP3K21Q5TCX8 1036 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 LZTR1Q8N653 840 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 SGF29Q96ES7 293 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 ERP44Q9BS26 406 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 TUBB6Q9BUF5 446 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 SEZ6LQ9BYH1 1024 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 EDEM3Q9BZQ6 932 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 HDAC9Q9UKV0 1011 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 ZBTB21Q9ULJ3 1066 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 PACSIN2Q9UNF0 486 aaPredicted RBP9.2□□□□□ -0.94
ATG4A-203ENST00000372232 RPTORQ8N122 1335 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 IGLV3-22A0A075B6J6 115 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 GOLGA8CPA6NN73 597 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 KCNK3O14649 394 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 GIPC1O14908 333 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 XPOTO43592 962 aaKnown RBP9.2□□□□□ -0.94
ATG4A-203ENST00000372232 FARP2O94887 1054 aaPredicted RBP9.2□□□□□ -0.94
ATG4A-203ENST00000372232 HSPA1AP0DMV8 641 aaKnown RBP9.2□□□□□ -0.94
ATG4A-203ENST00000372232 HSPA1BP0DMV9 641 aaKnown RBP9.2□□□□□ -0.94
ATG4A-203ENST00000372232 ZBTB48P10074 688 aaPredicted RBP9.2□□□□□ -0.94
ATG4A-203ENST00000372232 ATP5DP30049 168 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 STX2P32856 288 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 ENTPD1P49961 510 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 RAP1GDS1P52306 607 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 ZNF132P52740 706 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 THOC5Q13769 683 aaKnown RBP9.2□□□□□ -0.94
ATG4A-203ENST00000372232 C16orf72Q14CZ0 275 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 RPS6KA1Q15418 735 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 TRIP4Q15650 581 aaPredicted RBP9.2□□□□□ -0.94
ATG4A-203ENST00000372232 TBC1D10BQ4KMP7 808 aaPredicted RBP9.2□□□□□ -0.94
ATG4A-203ENST00000372232 ANKRD20A4Q4UJ75 823 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 TAF1BQ53T94 588 aaPredicted RBP9.2□□□□□ -0.94
ATG4A-203ENST00000372232 TMTC4Q5T4D3 741 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 DUPD1Q68J44 220 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 RRAGAQ7L523 313 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 ZNF410Q86VK4 478 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 ZC3H3Q8IXZ2 948 aaKnown RBP9.2□□□□□ -0.94
ATG4A-203ENST00000372232 ZNF295-AS1Q8N0V1 137 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 RASGEF1CQ8N431 466 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 SLC16A10Q8TF71 515 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 C10orf82Q8WW14 230 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 TCF12Q99081 682 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 RSRP1Q9BUV0 290 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 AP1M1Q9BXS5 423 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 EHD1Q9H4M9 534 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 ZNF277Q9NRM2 450 aaPredicted RBP9.2□□□□□ -0.94
ATG4A-203ENST00000372232 SLC38A7Q9NVC3 462 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 TRNAU1APQ9NX07 287 aaKnown RBP9.2□□□□□ -0.94
ATG4A-203ENST00000372232 PFDN2Q9UHV9 154 aa9.2□□□□□ -0.94
ATG4A-203ENST00000372232 DBR1Q9UK59 544 aaKnown RBP9.2□□□□□ -0.94
ATG4A-203ENST00000372232 NOC2LQ9Y3T9 749 aaKnown RBP9.2□□□□□ -0.94
ATG4A-203ENST00000372232 CFAP69A5D8W1 941 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 LRRC53A6NM62 1247 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 KRIT1O00522 736 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 GNRH1P01148 92 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 RARGP13631 454 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 VCLP18206 1134 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 KRT4P19013 534 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 AP3M2P53677 418 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 VCPP55072 806 aaKnown RBP9.19□□□□□ -0.94
ATG4A-203ENST00000372232 STRN3Q13033 797 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 DDR2Q16832 855 aa9.19□□□□□ -0.94
ATG4A-203ENST00000372232 EDRF1Q3B7T1 1238 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms