RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 IGSF21Q96ID5 467 aa27.49■■□□□ 1.99
ATPAF1-202ENST00000371937 B3GALT6Q96L58 329 aa27.49■■□□□ 1.99
ATPAF1-202ENST00000371937 SLC2A13Q96QE2 648 aa27.49■■□□□ 1.99
ATPAF1-202ENST00000371937 RC3H2Q9HBD1 1191 aaKnown RBP27.49■■□□□ 1.99
ATPAF1-202ENST00000371937 PTPRDP23468 1912 aa27.49■■□□□ 1.99
ATPAF1-202ENST00000371937 KDELR1P24390 212 aa27.48■■□□□ 1.99
ATPAF1-202ENST00000371937 CDKN2BP42772 138 aa27.48■■□□□ 1.99
ATPAF1-202ENST00000371937 PPIGQ13427 754 aaKnown RBP eCLIP27.48■■□□□ 1.99
ATPAF1-202ENST00000371937 USP41Q3LFD5 358 aa27.48■■□□□ 1.99
ATPAF1-202ENST00000371937 DCAF6Q58WW2 860 aa27.48■■□□□ 1.99
ATPAF1-202ENST00000371937 RTP2Q5QGT7 225 aa27.48■■□□□ 1.99
ATPAF1-202ENST00000371937 PM20D1Q6GTS8 502 aa27.48■■□□□ 1.99
ATPAF1-202ENST00000371937 FAM117BQ6P1L5 589 aa27.48■■□□□ 1.99
ATPAF1-202ENST00000371937 SCYL2Q6P3W7 929 aa27.48■■□□□ 1.99
ATPAF1-202ENST00000371937 KCNT2Q6UVM3 1135 aa27.48■■□□□ 1.99
ATPAF1-202ENST00000371937 IFT20Q8IY31 132 aa27.48■■□□□ 1.99
ATPAF1-202ENST00000371937 HNRNPLLQ8WVV9 542 aaKnown RBP27.48■■□□□ 1.99
ATPAF1-202ENST00000371937 TEKT4Q8WW24 435 aa27.48■■□□□ 1.99
ATPAF1-202ENST00000371937 ACSF2Q96CM8 615 aaPredicted RBP27.48■■□□□ 1.99
ATPAF1-202ENST00000371937 LRRC19Q9H756 370 aa27.48■■□□□ 1.99
ATPAF1-202ENST00000371937 EFEMP2O95967 443 aa27.48■■□□□ 1.99
ATPAF1-202ENST00000371937 FNTAP49354 379 aa27.48■■□□□ 1.99
ATPAF1-202ENST00000371937 HDAC4P56524 1084 aa27.48■■□□□ 1.99
ATPAF1-202ENST00000371937 BTG3Q14201 252 aaPredicted RBP27.48■■□□□ 1.99
ATPAF1-202ENST00000371937 HSPH1Q92598 858 aa27.48■■□□□ 1.99
ATPAF1-202ENST00000371937 ZNF558Q96NG5 402 aa27.48■■□□□ 1.99
ATPAF1-202ENST00000371937 PEBP4Q96S96 227 aa27.48■■□□□ 1.99
ATPAF1-202ENST00000371937 PCYOX1Q9UHG3 505 aa27.48■■□□□ 1.99
ATPAF1-202ENST00000371937 USP3Q9Y6I4 520 aa27.48■■□□□ 1.99
ATPAF1-202ENST00000371937 C3orf70A6NLC5 250 aaPredicted RBP27.47■■□□□ 1.99
ATPAF1-202ENST00000371937 YJEFN3A6XGL0 299 aa27.47■■□□□ 1.99
ATPAF1-202ENST00000371937 E7ENQ6 273 aa27.47■■□□□ 1.99
ATPAF1-202ENST00000371937 CAPN9O14815 690 aa27.47■■□□□ 1.99
ATPAF1-202ENST00000371937 TBC1D4O60343 1298 aa27.47■■□□□ 1.99
ATPAF1-202ENST00000371937 MAGEA11P43364 429 aa27.47■■□□□ 1.99
ATPAF1-202ENST00000371937 DR1Q01658 176 aa27.47■■□□□ 1.99
ATPAF1-202ENST00000371937 TMCO3Q6UWJ1 677 aa27.47■■□□□ 1.99
ATPAF1-202ENST00000371937 OTOP2Q7RTS6 562 aa27.47■■□□□ 1.99
ATPAF1-202ENST00000371937 NT5C3BQ969T7 300 aa27.47■■□□□ 1.99
ATPAF1-202ENST00000371937 HERPUD2Q9BSE4 406 aa27.47■■□□□ 1.99
ATPAF1-202ENST00000371937 TRIM62Q9BVG3 475 aa27.47■■□□□ 1.99
ATPAF1-202ENST00000371937 ARFGAP3Q9NP61 516 aa27.47■■□□□ 1.99
ATPAF1-202ENST00000371937 COL4A6Q14031 1691 aa27.47■■□□□ 1.99
ATPAF1-202ENST00000371937 hCG_1818297A0A087WSY0 165 aa27.46■■□□□ 1.99
ATPAF1-202ENST00000371937 TRIM66O15016 1216 aa27.46■■□□□ 1.99
ATPAF1-202ENST00000371937 ZMYND10O75800 440 aa27.46■■□□□ 1.99
ATPAF1-202ENST00000371937 LTFP02788 710 aa27.46■■□□□ 1.99
ATPAF1-202ENST00000371937 CPB1P15086 417 aa27.46■■□□□ 1.99
ATPAF1-202ENST00000371937 GPR17Q13304 367 aa27.46■■□□□ 1.99
ATPAF1-202ENST00000371937 CCDC137Q6PK04 289 aaKnown RBP27.46■■□□□ 1.99
ATPAF1-202ENST00000371937 CYP4V2Q6ZWL3 525 aaPredicted RBP27.46■■□□□ 1.99
ATPAF1-202ENST00000371937 TAS1R1Q7RTX1 841 aa27.46■■□□□ 1.99
ATPAF1-202ENST00000371937 ANKS1BQ7Z6G8 1248 aa27.46■■□□□ 1.99
ATPAF1-202ENST00000371937 MAP7D3Q8IWC1 876 aa27.46■■□□□ 1.99
ATPAF1-202ENST00000371937 C8orf48Q96LL4 319 aa27.46■■□□□ 1.99
ATPAF1-202ENST00000371937 RRN3Q9NYV6 651 aa27.46■■□□□ 1.99
ATPAF1-202ENST00000371937 LAG3P18627 525 aa27.46■■□□□ 1.99
ATPAF1-202ENST00000371937 COILP38432 576 aaPredicted RBP27.46■■□□□ 1.99
ATPAF1-202ENST00000371937 SULT1E1P49888 294 aa27.46■■□□□ 1.99
ATPAF1-202ENST00000371937 GUCY2DQ02846 1103 aa27.46■■□□□ 1.99
ATPAF1-202ENST00000371937 TAZQ16635 292 aa27.46■■□□□ 1.99
ATPAF1-202ENST00000371937 MAP9Q49MG5 647 aa27.46■■□□□ 1.99
ATPAF1-202ENST00000371937 RAB6CQ53S08 254 aa27.46■■□□□ 1.99
ATPAF1-202ENST00000371937 CCNI2Q6ZMN8 369 aaPredicted RBP27.46■■□□□ 1.99
ATPAF1-202ENST00000371937 TMCO2Q7Z6W1 182 aaPredicted RBP27.46■■□□□ 1.99
ATPAF1-202ENST00000371937 SCN4BQ8IWT1 228 aa27.46■■□□□ 1.99
ATPAF1-202ENST00000371937 NPY6RQ99463 290 aa27.46■■□□□ 1.99
ATPAF1-202ENST00000371937 RAB6CQ9H0N0 254 aa27.46■■□□□ 1.99
ATPAF1-202ENST00000371937 EPB41L5Q9HCM4 733 aa27.46■■□□□ 1.99
ATPAF1-202ENST00000371937 GDF3Q9NR23 364 aa27.46■■□□□ 1.99
ATPAF1-202ENST00000371937 STAU2Q9NUL3 570 aaKnown RBP eCLIP27.46■■□□□ 1.99
ATPAF1-202ENST00000371937 FAM187AA6NFU0 413 aa27.45■■□□□ 1.98
ATPAF1-202ENST00000371937 MDM4O15151 490 aa27.45■■□□□ 1.98
ATPAF1-202ENST00000371937 FGBP02675 491 aa27.45■■□□□ 1.98
ATPAF1-202ENST00000371937 KRT10P13645 584 aa27.45■■□□□ 1.98
ATPAF1-202ENST00000371937 TFE3P19532 575 aaPredicted RBP27.45■■□□□ 1.98
ATPAF1-202ENST00000371937 TNFRSF8P28908 595 aa27.45■■□□□ 1.98
ATPAF1-202ENST00000371937 RBM10P98175 930 aaKnown RBP27.45■■□□□ 1.98
ATPAF1-202ENST00000371937 PDK2Q15119 407 aa27.45■■□□□ 1.98
ATPAF1-202ENST00000371937 KAZNQ674X7 775 aa27.45■■□□□ 1.98
ATPAF1-202ENST00000371937 HFE2Q6ZVN8 426 aa27.45■■□□□ 1.98
ATPAF1-202ENST00000371937 RNF168Q8IYW5 571 aaPredicted RBP27.45■■□□□ 1.98
ATPAF1-202ENST00000371937 SPPL2BQ8TCT7 592 aa27.45■■□□□ 1.98
ATPAF1-202ENST00000371937 C2orf15Q8WU43 125 aaKnown RBP27.45■■□□□ 1.98
ATPAF1-202ENST00000371937 YME1L1Q96TA2 773 aa27.45■■□□□ 1.98
ATPAF1-202ENST00000371937 TNFRSF10BO14763 440 aa27.44■■□□□ 1.98
ATPAF1-202ENST00000371937 TTI1O43156 1089 aa27.44■■□□□ 1.98
ATPAF1-202ENST00000371937 ENDOD1O94919 500 aa27.44■■□□□ 1.98
ATPAF1-202ENST00000371937 SLC5A3P53794 718 aa27.44■■□□□ 1.98
ATPAF1-202ENST00000371937 ARPP19P56211 112 aa27.44■■□□□ 1.98
ATPAF1-202ENST00000371937 FPGSQ05932 587 aa27.44■■□□□ 1.98
ATPAF1-202ENST00000371937 CCNG2Q16589 344 aa27.44■■□□□ 1.98
ATPAF1-202ENST00000371937 CCDC105Q8IYK2 499 aa27.44■■□□□ 1.98
ATPAF1-202ENST00000371937 TMEM169Q96HH4 297 aa27.44■■□□□ 1.98
ATPAF1-202ENST00000371937 FEZ2Q9UHY8 353 aaPredicted RBP27.44■■□□□ 1.98
ATPAF1-202ENST00000371937 RASAL2Q9UJF2 1139 aa27.44■■□□□ 1.98
ATPAF1-202ENST00000371937 UTP11Q9Y3A2 253 aaKnown RBP27.44■■□□□ 1.98
ATPAF1-202ENST00000371937 MKI67P46013 3256 aaKnown RBP27.44■■□□□ 1.98
ATPAF1-202ENST00000371937 FYNP06241 537 aa27.44■■□□□ 1.98
ATPAF1-202ENST00000371937 CDH6P55285 790 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms