RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 ADCK2Q7Z695 626 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 SUPT7LO94864 414 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 UCHL3P15374 230 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 SLC26A3P40879 764 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 PDK1Q15118 436 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 RAPGEF6Q8TEU7 1601 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 SAGE2PA6NJ88 616 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 DLG4P78352 724 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 CWF19L1Q69YN2 538 aaKnown RBP15.73■□□□□ 0.11
COL5A1-201ENST00000371817 LLGL2Q6P1M3 1020 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 GATAD2AQ86YP4 633 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 RHOBTB2Q9BYZ6 727 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 NUP50Q9UKX7 468 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 DNAJC16Q9Y2G8 782 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 ARHGEF33A8MVX0 844 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 P4HBP07237 508 aaKnown RBP15.73■□□□□ 0.11
COL5A1-201ENST00000371817 AP3M2P53677 418 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 POLNQ7Z5Q5 900 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 STK32CQ86UX6 486 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 FAM228AQ86W67 206 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 RFT1Q96AA3 541 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 MCUBQ9NWR8 336 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 ASAP1Q9ULH1 1129 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 WDR19Q8NEZ3 1342 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 COMTP21964 271 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 ME2P23368 584 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 ARHGDIBP52566 201 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 SLC5A9Q2M3M2 681 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 CAMK1DQ8IU85 385 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 CLHC1Q8NHS4 586 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 TPCN2Q8NHX9 752 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 TSEN34Q9BSV6 310 aaKnown RBP15.73■□□□□ 0.11
COL5A1-201ENST00000371817 ZNF408Q9H9D4 720 aa15.73■□□□□ 0.11
COL5A1-201ENST00000371817 H3BQF6 201 aa15.72■□□□□ 0.11
COL5A1-201ENST00000371817 MTSS1O43312 755 aa15.72■□□□□ 0.11
COL5A1-201ENST00000371817 IST1P53990 364 aa15.72■□□□□ 0.11
COL5A1-201ENST00000371817 NME5P56597 212 aa15.72■□□□□ 0.11
COL5A1-201ENST00000371817 BST2Q10589 180 aaKnown RBP15.72■□□□□ 0.11
COL5A1-201ENST00000371817 LPIN1Q14693 890 aa15.72■□□□□ 0.11
COL5A1-201ENST00000371817 NIM1KQ8IY84 436 aa15.72■□□□□ 0.11
COL5A1-201ENST00000371817 KBTBD8Q8NFY9 601 aa15.72■□□□□ 0.11
COL5A1-201ENST00000371817 SRPK1Q96SB4 655 aaKnown RBP15.72■□□□□ 0.11
COL5A1-201ENST00000371817 SPON2Q9BUD6 331 aa15.72■□□□□ 0.11
COL5A1-201ENST00000371817 FGFR3P22607 806 aa15.72■□□□□ 0.11
COL5A1-201ENST00000371817 SNRNP48Q6IEG0 339 aaKnown RBP15.72■□□□□ 0.11
COL5A1-201ENST00000371817 ULK2Q8IYT8 1036 aa15.72■□□□□ 0.11
COL5A1-201ENST00000371817 CMTM6Q9NX76 183 aa15.72■□□□□ 0.11
COL5A1-201ENST00000371817 LCP1P13796 627 aa15.72■□□□□ 0.11
COL5A1-201ENST00000371817 HOXA13P31271 388 aaPredicted RBP15.72■□□□□ 0.11
COL5A1-201ENST00000371817 KCTD2Q14681 263 aa15.72■□□□□ 0.11
COL5A1-201ENST00000371817 PFKFB3Q16875 520 aaPredicted RBP15.72■□□□□ 0.11
COL5A1-201ENST00000371817 CCDC115Q96NT0 180 aa15.72■□□□□ 0.11
COL5A1-201ENST00000371817 APOL5Q9BWW9 433 aa15.72■□□□□ 0.11
COL5A1-201ENST00000371817 TRMT6Q9UJA5 497 aaKnown RBP15.72■□□□□ 0.11
COL5A1-201ENST00000371817 FARP2O94887 1054 aaPredicted RBP15.72■□□□□ 0.11
COL5A1-201ENST00000371817 CLTBP09497 229 aa15.72■□□□□ 0.11
COL5A1-201ENST00000371817 STAT3P40763 770 aa15.72■□□□□ 0.11
COL5A1-201ENST00000371817 VBP1P61758 197 aa15.72■□□□□ 0.11
COL5A1-201ENST00000371817 SAMD4BQ5PRF9 694 aaKnown RBP15.72■□□□□ 0.11
COL5A1-201ENST00000371817 METTL16Q86W50 562 aaKnown RBP15.72■□□□□ 0.11
COL5A1-201ENST00000371817 C1orf131Q8NDD1 294 aaKnown RBP15.72■□□□□ 0.11
COL5A1-201ENST00000371817 OXNAD1Q96HP4 312 aaPredicted RBP15.72■□□□□ 0.11
COL5A1-201ENST00000371817 WRNIP1Q96S55 665 aa15.72■□□□□ 0.11
COL5A1-201ENST00000371817 RAD54BQ9Y620 910 aa15.72■□□□□ 0.11
COL5A1-201ENST00000371817 KPNA6O60684 536 aa15.72■□□□□ 0.11
COL5A1-201ENST00000371817 LBPP18428 481 aa15.72■□□□□ 0.11
COL5A1-201ENST00000371817 GRIK1P39086 918 aa15.72■□□□□ 0.11
COL5A1-201ENST00000371817 MTM1Q13496 603 aa15.72■□□□□ 0.11
COL5A1-201ENST00000371817 RAD9BQ6WBX8 426 aa15.72■□□□□ 0.11
COL5A1-201ENST00000371817 NET1Q7Z628 596 aaPredicted RBP15.72■□□□□ 0.11
COL5A1-201ENST00000371817 KIF20BQ96Q89 1820 aa15.72■□□□□ 0.11
COL5A1-201ENST00000371817 SNAP91O60641 907 aa15.72■□□□□ 0.11
COL5A1-201ENST00000371817 EIF4A1P60842 406 aaKnown RBP15.72■□□□□ 0.11
COL5A1-201ENST00000371817 PGS1Q32NB8 556 aa15.72■□□□□ 0.11
COL5A1-201ENST00000371817 PROSER1Q86XN7 944 aa15.72■□□□□ 0.11
COL5A1-201ENST00000371817 AGAP11Q8TF27 550 aa15.72■□□□□ 0.11
COL5A1-201ENST00000371817 MYLPFQ96A32 169 aa15.72■□□□□ 0.11
COL5A1-201ENST00000371817 KCTD10Q9H3F6 313 aa15.72■□□□□ 0.11
COL5A1-201ENST00000371817 MOV10Q9HCE1 1003 aaKnown RBP15.72■□□□□ 0.11
COL5A1-201ENST00000371817 RUVBL2Q9Y230 463 aaKnown RBP15.72■□□□□ 0.11
COL5A1-201ENST00000371817 ZNF879B4DU55 563 aa15.72■□□□□ 0.11
COL5A1-201ENST00000371817 H3BN98 237 aa15.72■□□□□ 0.11
COL5A1-201ENST00000371817 PABPC1P11940 636 aaKnown RBP15.72■□□□□ 0.11
COL5A1-201ENST00000371817 DENND5AQ6IQ26 1287 aa15.72■□□□□ 0.11
COL5A1-201ENST00000371817 POTEGQ6S5H5 508 aa15.72■□□□□ 0.11
COL5A1-201ENST00000371817 SHC4Q6S5L8 630 aa15.72■□□□□ 0.11
COL5A1-201ENST00000371817 THNSL1Q8IYQ7 743 aa15.72■□□□□ 0.11
COL5A1-201ENST00000371817 MYH1P12882 1939 aa15.71■□□□□ 0.11
COL5A1-201ENST00000371817 MYH2Q9UKX2 1941 aa15.71■□□□□ 0.11
COL5A1-201ENST00000371817 MYH4Q9Y623 1939 aa15.71■□□□□ 0.11
COL5A1-201ENST00000371817 SLC1A6P48664 564 aa15.71■□□□□ 0.11
COL5A1-201ENST00000371817 DPP9Q86TI2 863 aa15.71■□□□□ 0.11
COL5A1-201ENST00000371817 SYN2Q92777 582 aaPredicted RBP15.71■□□□□ 0.11
COL5A1-201ENST00000371817 MRPL4Q9BYD3 311 aaKnown RBP15.71■□□□□ 0.11
COL5A1-201ENST00000371817 AP5M1Q9H0R1 490 aa15.71■□□□□ 0.11
COL5A1-201ENST00000371817 GJB4Q9NTQ9 266 aa15.71■□□□□ 0.11
COL5A1-201ENST00000371817 FOXN3O00409 490 aaPredicted RBP15.71■□□□□ 0.11
COL5A1-201ENST00000371817 PLEKHA8P1O95397 391 aa15.71■□□□□ 0.11
COL5A1-201ENST00000371817 FCER1AP12319 257 aa15.71■□□□□ 0.11
COL5A1-201ENST00000371817 NPR2P20594 1047 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms