RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 POLR3BQ9NW08 1133 aaPredicted RBP7.37□□□□□ -1.23
USP1-202ENST00000371146 SIX4Q9UIU6 781 aa7.37□□□□□ -1.23
USP1-202ENST00000371146 CPQQ9Y646 472 aa7.37□□□□□ -1.23
USP1-202ENST00000371146 NID2Q14112 1375 aa7.37□□□□□ -1.23
USP1-202ENST00000371146 PI4K2BG5E9Z4 385 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 M0QYT0 321 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 UCHL3P15374 230 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 GPC5P78333 572 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 HYAL1Q12794 435 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 HYIQ5T013 277 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 SIX5Q8N196 739 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 ADAMTS19Q8TE59 1207 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 FGF13Q92913 245 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 PPP1R10Q96QC0 940 aaKnown RBP7.36□□□□□ -1.23
USP1-202ENST00000371146 KCTD10Q9H3F6 313 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 POMKQ9H5K3 350 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 APOBEC3GQ9HC16 384 aaKnown RBP7.36□□□□□ -1.23
USP1-202ENST00000371146 LSM7Q9UK45 103 aaKnown RBP7.36□□□□□ -1.23
USP1-202ENST00000371146 ITIH6Q6UXX5 1313 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 MYO18BQ8IUG5 2567 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 SH3BP5O60239 455 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 CXCL10P02778 98 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 PDGFRAP16234 1089 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 MAGEA1P43355 309 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 ZNF131P52739 623 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 PHLDB3Q6NSJ2 640 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 PPP4R3CPQ6ZMV5 832 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 CD302Q8IX05 232 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 TMEM35BQ8NCS4 154 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 USP33Q8TEY7 942 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 CASP10Q92851 521 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 DHX35Q9H5Z1 703 aaKnown RBP7.36□□□□□ -1.23
USP1-202ENST00000371146 HAUS4Q9H6D7 363 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 CWH43Q9H720 699 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 APEX2Q9UBZ4 518 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 RAPGEFL1Q9UHV5 662 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 TMEM98Q9Y2Y6 226 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 INSL5Q9Y5Q6 135 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 CHD8Q9HCK8 2581 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 PTPRFP10586 1907 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 CCDC78A2IDD5 438 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 C2orf78A6NCI8 922 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 EIF3CLB5ME19 914 aaKnown RBP7.36□□□□□ -1.23
USP1-202ENST00000371146 E5RJQ4 531 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 H0Y626 953 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 TBC1D4O60343 1298 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 RNF8O76064 485 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 BEST1O76090 585 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 HOXD8P13378 290 aaPredicted RBP7.36□□□□□ -1.23
USP1-202ENST00000371146 CCNHP51946 323 aaPredicted RBP7.36□□□□□ -1.23
USP1-202ENST00000371146 ERVK-21P61565 698 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 MRPS5P82675 430 aaKnown RBP7.36□□□□□ -1.23
USP1-202ENST00000371146 PPARDQ03181 441 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 ZACNQ401N2 412 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 KIAA1324Q6UXG2 1013 aaKnown RBP7.36□□□□□ -1.23
USP1-202ENST00000371146 ITIH5Q86UX2 942 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 FAM35AQ86V20 835 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 CIR1Q86X95 450 aaPredicted RBP7.36□□□□□ -1.23
USP1-202ENST00000371146 ENOX1Q8TC92 643 aaKnown RBP7.36□□□□□ -1.23
USP1-202ENST00000371146 RPL10LQ96L21 214 aaKnown RBP7.36□□□□□ -1.23
USP1-202ENST00000371146 EIF3CQ99613 913 aaKnown RBP7.36□□□□□ -1.23
USP1-202ENST00000371146 BBS2Q9BXC9 721 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 LINC00597Q9H2U6 94 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 PLEKHA5Q9HAU0 1116 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 DMAP1Q9NPF5 467 aaPredicted RBP7.36□□□□□ -1.23
USP1-202ENST00000371146 MARCH5Q9NX47 278 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 SSX2IPQ9Y2D8 614 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 C2CD2Q9Y426 696 aa7.36□□□□□ -1.23
USP1-202ENST00000371146 ASCC3Q8N3C0 2202 aaKnown RBP7.35□□□□□ -1.23
USP1-202ENST00000371146 A0A1W2PQH9 124 aa7.35□□□□□ -1.23
USP1-202ENST00000371146 MTMR11A4FU01 709 aa7.35□□□□□ -1.23
USP1-202ENST00000371146 ZNF263O14978 683 aa7.35□□□□□ -1.23
USP1-202ENST00000371146 PEX14O75381 377 aa7.35□□□□□ -1.23
USP1-202ENST00000371146 IFNB1P01574 187 aa7.35□□□□□ -1.23
USP1-202ENST00000371146 RB1P06400 928 aa7.35□□□□□ -1.23
USP1-202ENST00000371146 ERCC5P28715 1186 aaPredicted RBP7.35□□□□□ -1.23
USP1-202ENST00000371146 TPP2P29144 1249 aaPredicted RBP7.35□□□□□ -1.23
USP1-202ENST00000371146 TIE1P35590 1138 aa7.35□□□□□ -1.23
USP1-202ENST00000371146 EIF4A3P38919 411 aaKnown RBP7.35□□□□□ -1.23
USP1-202ENST00000371146 HARS2P49590 506 aaKnown RBP7.35□□□□□ -1.23
USP1-202ENST00000371146 SLC5A3P53794 718 aa7.35□□□□□ -1.23
USP1-202ENST00000371146 GFPT1Q06210 699 aaPredicted RBP7.35□□□□□ -1.23
USP1-202ENST00000371146 CDH18Q13634 790 aa7.35□□□□□ -1.23
USP1-202ENST00000371146 KRT81Q14533 505 aa7.35□□□□□ -1.23
USP1-202ENST00000371146 DSC3Q14574 896 aa7.35□□□□□ -1.23
USP1-202ENST00000371146 CCDC6Q16204 474 aa7.35□□□□□ -1.23
USP1-202ENST00000371146 CDCA2Q69YH5 1023 aaPredicted RBP7.35□□□□□ -1.23
USP1-202ENST00000371146 DENND1BQ6P3S1 775 aa7.35□□□□□ -1.23
USP1-202ENST00000371146 TRAF7Q6Q0C0 670 aa7.35□□□□□ -1.23
USP1-202ENST00000371146 SDCCAG8Q86SQ7 713 aaPredicted RBP7.35□□□□□ -1.23
USP1-202ENST00000371146 OR6K2Q8NGY2 324 aa7.35□□□□□ -1.23
USP1-202ENST00000371146 LNX1Q8TBB1 728 aaPredicted RBP7.35□□□□□ -1.23
USP1-202ENST00000371146 ZNF606Q8WXB4 792 aa7.35□□□□□ -1.23
USP1-202ENST00000371146 C18orf8Q96DM3 657 aa7.35□□□□□ -1.23
USP1-202ENST00000371146 GUCD1Q96NT3 240 aa7.35□□□□□ -1.23
USP1-202ENST00000371146 HEMGNQ9BXL5 484 aa7.35□□□□□ -1.23
USP1-202ENST00000371146 BCO2Q9BYV7 579 aa7.35□□□□□ -1.23
USP1-202ENST00000371146 ELOVL4Q9GZR5 314 aa7.35□□□□□ -1.23
USP1-202ENST00000371146 MUC3BQ9H195 1237 aa7.35□□□□□ -1.23
USP1-202ENST00000371146 HOMER3Q9NSC5 361 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms