RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 HOXC11O43248 304 aaPredicted RBP17.07■□□□□ 0.32
VMA21-202ENST00000370361 ZNF202O95125 648 aa17.07■□□□□ 0.32
VMA21-202ENST00000370361 PSEN1P49768 467 aa17.07■□□□□ 0.32
VMA21-202ENST00000370361 ADAM9Q13443 819 aa17.07■□□□□ 0.32
VMA21-202ENST00000370361 GAB4Q2WGN9 574 aa17.07■□□□□ 0.32
VMA21-202ENST00000370361 SCAMP5Q8TAC9 235 aa17.07■□□□□ 0.32
VMA21-202ENST00000370361 SLC2A14Q8TDB8 520 aa17.07■□□□□ 0.32
VMA21-202ENST00000370361 EZH1Q92800 747 aaPredicted RBP17.07■□□□□ 0.32
VMA21-202ENST00000370361 CNOT6LQ96LI5 555 aaKnown RBP17.07■□□□□ 0.32
VMA21-202ENST00000370361 CYLDQ9NQC7 956 aa17.07■□□□□ 0.32
VMA21-202ENST00000370361 VPS45Q9NRW7 570 aa17.07■□□□□ 0.32
VMA21-202ENST00000370361 SCML2Q9UQR0 700 aa17.07■□□□□ 0.32
VMA21-202ENST00000370361 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.06■□□□□ 0.32
VMA21-202ENST00000370361 TLR5O60602 858 aa17.06■□□□□ 0.32
VMA21-202ENST00000370361 KAT7O95251 611 aa17.06■□□□□ 0.32
VMA21-202ENST00000370361 BYSLQ13895 437 aaKnown RBP17.06■□□□□ 0.32
VMA21-202ENST00000370361 PLK5Q496M5 336 aa17.06■□□□□ 0.32
VMA21-202ENST00000370361 AASDHQ4L235 1098 aaPredicted RBP17.06■□□□□ 0.32
VMA21-202ENST00000370361 ZCWPW2Q504Y3 356 aa17.06■□□□□ 0.32
VMA21-202ENST00000370361 COBLL1Q53SF7 1204 aa17.06■□□□□ 0.32
VMA21-202ENST00000370361 EOGTQ5NDL2 527 aa17.06■□□□□ 0.32
VMA21-202ENST00000370361 KRT39Q6A163 491 aa17.06■□□□□ 0.32
VMA21-202ENST00000370361 RHBDF2Q6PJF5 856 aa17.06■□□□□ 0.32
VMA21-202ENST00000370361 KBTBD6Q86V97 674 aa17.06■□□□□ 0.32
VMA21-202ENST00000370361 RASSF3Q86WH2 238 aa17.06■□□□□ 0.32
VMA21-202ENST00000370361 ZNF276Q8N554 614 aa17.06■□□□□ 0.32
VMA21-202ENST00000370361 ZFRQ96KR1 1074 aaKnown RBP17.06■□□□□ 0.32
VMA21-202ENST00000370361 SMOQ99835 787 aa17.06■□□□□ 0.32
VMA21-202ENST00000370361 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.06■□□□□ 0.321e-6■■■■■ 46.6
VMA21-202ENST00000370361 GMIPQ9P107 970 aa17.06■□□□□ 0.32
VMA21-202ENST00000370361 CHORDC1Q9UHD1 332 aaPredicted RBP17.06■□□□□ 0.32
VMA21-202ENST00000370361 LSM7Q9UK45 103 aaKnown RBP17.06■□□□□ 0.32
VMA21-202ENST00000370361 MYH10P35580 1976 aa17.06■□□□□ 0.32
VMA21-202ENST00000370361 ATG2BQ96BY7 2078 aa17.05■□□□□ 0.32
VMA21-202ENST00000370361 CILPO75339 1184 aa17.05■□□□□ 0.32
VMA21-202ENST00000370361 EPB41P11171 864 aaKnown RBP17.05■□□□□ 0.32
VMA21-202ENST00000370361 CCDC130P13994 396 aa17.05■□□□□ 0.32
VMA21-202ENST00000370361 ATP5C1P36542 298 aaKnown RBP17.05■□□□□ 0.32
VMA21-202ENST00000370361 DPP6P42658 865 aa17.05■□□□□ 0.32
VMA21-202ENST00000370361 PXNP49023 591 aaPredicted RBP17.05■□□□□ 0.32
VMA21-202ENST00000370361 MAP3K7CLP57077 242 aa17.05■□□□□ 0.32
VMA21-202ENST00000370361 CRY1Q16526 586 aa17.05■□□□□ 0.32
VMA21-202ENST00000370361 PLA2G2CQ5R387 149 aa17.05■□□□□ 0.32
VMA21-202ENST00000370361 C1orf220Q5T0J3 134 aa17.05■□□□□ 0.32
VMA21-202ENST00000370361 NAIF1Q69YI7 327 aaPredicted RBP17.05■□□□□ 0.32
VMA21-202ENST00000370361 IL31Q6EBC2 164 aa17.05■□□□□ 0.32
VMA21-202ENST00000370361 HTR3DQ70Z44 454 aa17.05■□□□□ 0.32
VMA21-202ENST00000370361 ZMIZ2Q8NF64 920 aa17.05■□□□□ 0.32
VMA21-202ENST00000370361 CYFIP2Q96F07 1278 aa17.05■□□□□ 0.32
VMA21-202ENST00000370361 ARRDC1-AS1Q9H2J1 176 aa17.05■□□□□ 0.32
VMA21-202ENST00000370361 POLMQ9NP87 494 aaPredicted RBP17.05■□□□□ 0.32
VMA21-202ENST00000370361 ARHGEF4Q9NR80 690 aa17.05■□□□□ 0.32
VMA21-202ENST00000370361 HOOK1Q9UJC3 728 aaKnown RBP17.05■□□□□ 0.32
VMA21-202ENST00000370361 EML5Q05BV3 1969 aa17.04■□□□□ 0.32
VMA21-202ENST00000370361 CETN3O15182 167 aa17.04■□□□□ 0.32
VMA21-202ENST00000370361 PRR29P0C7W0 189 aa17.04■□□□□ 0.32
VMA21-202ENST00000370361 MPLP40238 635 aa17.04■□□□□ 0.32
VMA21-202ENST00000370361 GCLMP48507 274 aa17.04■□□□□ 0.32
VMA21-202ENST00000370361 SLC8A3P57103 927 aa17.04■□□□□ 0.32
VMA21-202ENST00000370361 C2orf27AQ580R0 203 aa17.04■□□□□ 0.32
VMA21-202ENST00000370361 SPDYCQ5MJ68 293 aa17.04■□□□□ 0.32
VMA21-202ENST00000370361 CLEC20AQ6ZU45 233 aa17.04■□□□□ 0.32
VMA21-202ENST00000370361 FBXL13Q8NEE6 735 aa17.04■□□□□ 0.32
VMA21-202ENST00000370361 TAS1R2Q8TE23 839 aa17.04■□□□□ 0.32
VMA21-202ENST00000370361 SPACA7Q96KW9 195 aa17.04■□□□□ 0.32
VMA21-202ENST00000370361 GSDMAQ96QA5 445 aa17.04■□□□□ 0.32
VMA21-202ENST00000370361 CCSER2Q9H7U1 834 aa17.04■□□□□ 0.32
VMA21-202ENST00000370361 SPHK2Q9NRA0 654 aa17.04■□□□□ 0.32
VMA21-202ENST00000370361 WDR35Q9P2L0 1181 aa17.04■□□□□ 0.32
VMA21-202ENST00000370361 DEC1Q9P2X7 70 aa17.04■□□□□ 0.32
VMA21-202ENST00000370361 GOLGA6L4A6NEF3 574 aa17.03■□□□□ 0.32
VMA21-202ENST00000370361 SLC16A3O15427 465 aaKnown RBP17.03■□□□□ 0.32
VMA21-202ENST00000370361 SMC2O95347 1197 aa17.03■□□□□ 0.32
VMA21-202ENST00000370361 MXI1P50539 228 aa17.03■□□□□ 0.32
VMA21-202ENST00000370361 PPP3CAQ08209 521 aa17.03■□□□□ 0.32
VMA21-202ENST00000370361 E2F5Q15329 346 aa17.03■□□□□ 0.32
VMA21-202ENST00000370361 LY6G5CQ5SRR4 150 aa17.03■□□□□ 0.32
VMA21-202ENST00000370361 SPOPLQ6IQ16 392 aa17.03■□□□□ 0.32
VMA21-202ENST00000370361 CCDC186Q7Z3E2 898 aa17.03■□□□□ 0.32
VMA21-202ENST00000370361 ETFBKMTQ8IXQ9 262 aa17.03■□□□□ 0.32
VMA21-202ENST00000370361 ARHGAP18Q8N392 663 aa17.03■□□□□ 0.32
VMA21-202ENST00000370361 C12orf29Q8N999 325 aa17.03■□□□□ 0.32
VMA21-202ENST00000370361 WHAMMQ8TF30 809 aa17.03■□□□□ 0.32
VMA21-202ENST00000370361 XPO6Q96QU8 1125 aaKnown RBP17.03■□□□□ 0.32
VMA21-202ENST00000370361 TSG101Q99816 390 aa17.03■□□□□ 0.32
VMA21-202ENST00000370361 UBXN6Q9BZV1 441 aa17.03■□□□□ 0.32
VMA21-202ENST00000370361 DUSP15Q9H1R2 295 aaPredicted RBP17.03■□□□□ 0.32
VMA21-202ENST00000370361 FAM49BQ9NUQ9 324 aa17.03■□□□□ 0.32
VMA21-202ENST00000370361 HMGXB4Q9UGU5 601 aa17.03■□□□□ 0.32
VMA21-202ENST00000370361 DNMT3LQ9UJW3 386 aa17.03■□□□□ 0.32
VMA21-202ENST00000370361 ZNF510Q9Y2H8 683 aa17.03■□□□□ 0.32
VMA21-202ENST00000370361 BEST1O76090 585 aa17.02■□□□□ 0.32
VMA21-202ENST00000370361 TRIM49P0CI25 452 aa17.02■□□□□ 0.32
VMA21-202ENST00000370361 TRIM49CP0CI26 452 aa17.02■□□□□ 0.32
VMA21-202ENST00000370361 RALAP11233 206 aa17.02■□□□□ 0.32
VMA21-202ENST00000370361 ADORA2BP29275 332 aa17.02■□□□□ 0.32
VMA21-202ENST00000370361 PPP1R2P41236 205 aa17.02■□□□□ 0.32
VMA21-202ENST00000370361 KIR2DL1P43626 348 aaPredicted RBP17.02■□□□□ 0.32
VMA21-202ENST00000370361 PLA2G4AP47712 749 aa17.02■□□□□ 0.32
VMA21-202ENST00000370361 SEC13P55735 322 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms