RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 SYF2O95926 243 aaKnown RBP5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 S100BP04271 92 aaPredicted RBP5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 KDELR1P24390 212 aa5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 RPL9P32969 192 aaKnown RBP5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 RFC1P35251 1148 aaPredicted RBP5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 HIRAP54198 1017 aaPredicted RBP5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 ZNF235Q14590 738 aa5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 TTC39BQ5VTQ0 682 aaPredicted RBP5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 OVOS1Q6IE37 1185 aa5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 ATP6V0D2Q8N8Y2 350 aa5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 ANKRD52Q8NB46 1076 aa5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 SLC2A14Q8TDB8 520 aa5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 MAML1Q92585 1016 aa5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 UPF1Q92900 1129 aaKnown RBP eCLIP5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 UROC1Q96N76 676 aa5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 ZBED2Q9BTP6 218 aa5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 ELOVL4Q9GZR5 314 aa5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 TSPYL2Q9H2G4 693 aaPredicted RBP5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 VCXQ9H320 206 aa5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 SLC8A2Q9UPR5 921 aa5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 USP15Q9Y4E8 981 aaPredicted RBP5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 A0A0G2JND7 137 aa5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 HACD1B0YJ81 288 aa5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 DDX3YO15523 660 aaKnown RBP5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 HNRNPCL1O60812 293 aaKnown RBP5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 HSPA4LO95757 839 aa5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 CYP1A1P04798 512 aaPredicted RBP5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 GJB1P08034 283 aa5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 ESRRAP11474 423 aaPredicted RBP5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 CYP2F1P24903 491 aa5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 SPRP35270 261 aaPredicted RBP5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 MAP3K7CLP57077 242 aa5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 RPL10AP62906 217 aaKnown RBP5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 ZNF844Q08AG5 666 aa5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 NOGQ13253 232 aa5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 MKRN4PQ13434 485 aaPredicted RBP5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 RBBP5Q15291 538 aaKnown RBP5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 MUM1Q2TAK8 710 aa5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 MON1BQ7L1V2 547 aa5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 FAM131BQ86XD5 332 aa5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 REM2Q8IYK8 340 aaPredicted RBP5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 ZCCHC9Q8N567 271 aaKnown RBP5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 CEP120Q8N960 986 aa5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 TTC8Q8TAM2 541 aa5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 MYCBPAPQ8TBZ2 947 aa5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 C18orf25Q96B23 403 aaPredicted RBP5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 MTBPQ96DY7 904 aa5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 NFKBIZQ9BYH8 718 aa5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 VCX3BQ9H321 246 aa5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 PDZD7Q9H5P4 517 aa5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 CHST7Q9NS84 486 aa5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 PRG3Q9Y2Y8 225 aaPredicted RBP5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 CDY2AQ9Y6F7 541 aa5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 STYXL1Q9Y6J8 313 aa5.52□□□□□ -1.53
SMNDC1-202ENST00000369603 SLX4Q8IY92 1834 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 CAND2O75155 1236 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 XPAP23025 273 aaPredicted RBP5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 ARFIP2P53365 341 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 PRAMEP78395 509 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 SP2Q02086 613 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 ADIGQ0VDE8 80 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 TAF11Q15544 211 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 FAM187BQ17R55 369 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 MGAT5BQ3V5L5 792 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 FSCBQ5H9T9 825 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 PRAMEF19Q5SWL8 479 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 ZNF280DQ6N043 979 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 LCLAT1Q6UWP7 414 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 BBS12Q6ZW61 710 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 SCUBE3Q8IX30 993 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 KIRREL3Q8IZU9 778 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 TOP6BLQ8N6T0 577 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 FBXO36Q8NEA4 188 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 EPS8L3Q8TE67 593 aaKnown RBP5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 THOC1Q96FV9 657 aaKnown RBP5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 BORCS6Q96GS4 357 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 SENP8Q96LD8 212 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 TRIM56Q9BRZ2 755 aaKnown RBP5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 DMAP1Q9NPF5 467 aaPredicted RBP5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 ABI2Q9NYB9 513 aaPredicted RBP5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 DNPEPQ9ULA0 475 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 APOBEC2Q9Y235 224 aaKnown RBP5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 GIT1Q9Y2X7 761 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 MYH4Q9Y623 1939 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 CASTOR2A6NHX0 329 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 SDR42E2A6NKP2 422 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 ATP9BO43861 1147 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 TSPAN1O60635 241 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 DUSP11O75319 330 aaKnown RBP5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 CILPO75339 1184 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 ITGAVP06756 1048 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 GHRP10912 638 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 PTPN1P18031 435 aaKnown RBP5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 CNTFP26441 200 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 NOS2P35228 1153 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 MARCKSL1P49006 195 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 SESN3P58005 492 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 STX1BP61266 288 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 SKOR1P84550 965 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 YWHAHQ04917 246 aaPredicted RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms