RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 RPLP2P05387 115 aaKnown RBP9.32□□□□□ -0.92
TPM3-213ENST00000368545 MCF2P10911 925 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 FGFR1P11362 822 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 IL9P15248 144 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 SMAD4Q13485 552 aaKnown RBP9.32□□□□□ -0.92
TPM3-213ENST00000368545 KCNA10Q16322 511 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 SLC18A3Q16572 532 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 TRIM61Q5EBN2 209 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 C10orf76Q5T2E6 689 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 PPP4R4Q6NUP7 873 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 SYT10Q6XYQ8 523 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 IRF2BP2Q7Z5L9 587 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 WDR49Q8IV35 697 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 C7orf31Q8N865 590 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 NT5C1BQ96P26 610 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 ADPGKQ9BRR6 497 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 GCOM2Q9BZD3 368 aaPredicted RBP9.32□□□□□ -0.92
TPM3-213ENST00000368545 MINDY3Q9H8M7 445 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 PDE11AQ9HCR9 933 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 AASDHPPTQ9NRN7 309 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 SUCOQ9UBS9 1254 aaKnown RBP9.32□□□□□ -0.92
TPM3-213ENST00000368545 NDOR1Q9UHB4 597 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 CPSF3Q9UKF6 684 aaKnown RBP9.32□□□□□ -0.92
TPM3-213ENST00000368545 REXO2Q9Y3B8 237 aaKnown RBP9.32□□□□□ -0.92
TPM3-213ENST00000368545 CITO14578 2027 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 PLXNA3P51805 1871 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 B4GALT5O43286 388 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 LPXNO60711 386 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 KRT37O76014 449 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 IL18RAPO95256 599 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 HARSP12081 509 aaKnown RBP9.32□□□□□ -0.92
TPM3-213ENST00000368545 POU3F2P20265 443 aaPredicted RBP9.32□□□□□ -0.92
TPM3-213ENST00000368545 KCNA5P22460 613 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 AVPR2P30518 371 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 GCNT1Q02742 428 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 NCBP1Q09161 790 aaKnown RBP9.32□□□□□ -0.92
TPM3-213ENST00000368545 KIF5AQ12840 1032 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 TAF2Q6P1X5 1199 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 GJB7Q6PEY0 223 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 AHI1Q8N157 1196 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 NME8Q8N427 588 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 TAS1R2Q8TE23 839 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 JAKMIP2Q96AA8 810 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 DHRS1Q96LJ7 313 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 CDT1Q9H211 546 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 OSGEPQ9NPF4 335 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 TOPORSQ9NS56 1045 aaPredicted RBP9.32□□□□□ -0.92
TPM3-213ENST00000368545 C1orf112Q9NSG2 853 aa9.32□□□□□ -0.92
TPM3-213ENST00000368545 AJAP1Q9UKB5 411 aaPredicted RBP9.32□□□□□ -0.92
TPM3-213ENST00000368545 C2CD2LO14523 706 aa9.31□□□□□ -0.92
TPM3-213ENST00000368545 C4BPAP04003 597 aaKnown RBP9.31□□□□□ -0.92
TPM3-213ENST00000368545 IQCF3P0C7M6 154 aa9.31□□□□□ -0.92
TPM3-213ENST00000368545 AXLP30530 894 aa9.31□□□□□ -0.92
TPM3-213ENST00000368545 PIK3CAP42336 1068 aa9.31□□□□□ -0.92
TPM3-213ENST00000368545 GNG11P61952 73 aa9.31□□□□□ -0.92
TPM3-213ENST00000368545 BIRC3Q13489 604 aa9.31□□□□□ -0.92
TPM3-213ENST00000368545 DHCR24Q15392 516 aa9.31□□□□□ -0.92
TPM3-213ENST00000368545 DCAF4L1Q3SXM0 396 aa9.31□□□□□ -0.92
TPM3-213ENST00000368545 CCDC122Q5T0U0 273 aa9.31□□□□□ -0.92
TPM3-213ENST00000368545 ZNF513Q8N8E2 541 aaPredicted RBP9.31□□□□□ -0.92
TPM3-213ENST00000368545 FAM13CQ8NE31 585 aa9.31□□□□□ -0.92
TPM3-213ENST00000368545 ZNF668Q96K58 619 aaPredicted RBP9.31□□□□□ -0.92
TPM3-213ENST00000368545 IMPG2Q9BZV3 1241 aa9.31□□□□□ -0.92
TPM3-213ENST00000368545 GPR88Q9GZN0 384 aa9.31□□□□□ -0.92
TPM3-213ENST00000368545 FAM49AQ9H0Q0 323 aaPredicted RBP9.31□□□□□ -0.92
TPM3-213ENST00000368545 ADAMTS10Q9H324 1103 aa9.31□□□□□ -0.92
TPM3-213ENST00000368545 PDZD7Q9H5P4 517 aa9.31□□□□□ -0.92
TPM3-213ENST00000368545 RPF1Q9H9Y2 349 aaKnown RBP9.31□□□□□ -0.92
TPM3-213ENST00000368545 UBE2TQ9NPD8 197 aaPredicted RBP9.31□□□□□ -0.92
TPM3-213ENST00000368545 DNAI1Q9UI46 699 aa9.31□□□□□ -0.92
TPM3-213ENST00000368545 PCDHA13Q9Y5I0 950 aa9.31□□□□□ -0.92
TPM3-213ENST00000368545 A0A1B0GUA9 196 aa9.31□□□□□ -0.92
TPM3-213ENST00000368545 MYADML2A6NDP7 307 aa9.31□□□□□ -0.92
TPM3-213ENST00000368545 ZNF263O14978 683 aa9.31□□□□□ -0.92
TPM3-213ENST00000368545 B4GALT4O60513 344 aa9.31□□□□□ -0.92
TPM3-213ENST00000368545 TSPAN1O60635 241 aa9.31□□□□□ -0.92
TPM3-213ENST00000368545 GPR32O75388 356 aa9.31□□□□□ -0.92
TPM3-213ENST00000368545 CLTAP09496 248 aa9.31□□□□□ -0.92
TPM3-213ENST00000368545 ARF4P18085 180 aaPredicted RBP9.31□□□□□ -0.92
TPM3-213ENST00000368545 CASQ1P31415 396 aa9.31□□□□□ -0.92
TPM3-213ENST00000368545 TNFSF9P41273 254 aa9.31□□□□□ -0.92
TPM3-213ENST00000368545 ARHGAP25P42331 645 aa9.31□□□□□ -0.92
TPM3-213ENST00000368545 RABGGTBP53611 331 aa9.31□□□□□ -0.92
TPM3-213ENST00000368545 KIZQ2M2Z5 673 aa9.31□□□□□ -0.92
TPM3-213ENST00000368545 C4orf46Q504U0 113 aa9.31□□□□□ -0.92
TPM3-213ENST00000368545 ZBTB41Q5SVQ8 909 aa9.31□□□□□ -0.92
TPM3-213ENST00000368545 HEATR6Q6AI08 1181 aaKnown RBP9.31□□□□□ -0.92
TPM3-213ENST00000368545 OTOP2Q7RTS6 562 aa9.31□□□□□ -0.92
TPM3-213ENST00000368545 ARHGEF19Q8IW93 802 aa9.31□□□□□ -0.92
TPM3-213ENST00000368545 PHACTR4Q8IZ21 702 aa9.31□□□□□ -0.92
TPM3-213ENST00000368545 COG1Q8WTW3 980 aa9.31□□□□□ -0.92
TPM3-213ENST00000368545 SEMA4DQ92854 862 aa9.31□□□□□ -0.92
TPM3-213ENST00000368545 PPP1R16BQ96T49 567 aa9.31□□□□□ -0.92
TPM3-213ENST00000368545 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.31□□□□□ -0.92
TPM3-213ENST00000368545 HDAC6Q9UBN7 1215 aa9.31□□□□□ -0.92
TPM3-213ENST00000368545 GTF2IRD1Q9UHL9 959 aa9.31□□□□□ -0.92
TPM3-213ENST00000368545 ZNF318Q5VUA4 2279 aa9.3□□□□□ -0.92
TPM3-213ENST00000368545 PJA2O43164 708 aa9.3□□□□□ -0.92
TPM3-213ENST00000368545 HLA-DRAP01903 254 aa9.3□□□□□ -0.92
TPM3-213ENST00000368545 NAT2P11245 290 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms