RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 C1orf220Q5T0J3 134 aa16.97■□□□□ 0.31
CKS1B-202ENST00000368436 TCEAL6Q6IPX3 200 aa16.97■□□□□ 0.31
CKS1B-202ENST00000368436 SV2AQ7L0J3 742 aa16.97■□□□□ 0.31
CKS1B-202ENST00000368436 UNC93AQ86WB7 457 aa16.97■□□□□ 0.31
CKS1B-202ENST00000368436 ALLCQ8N6M5 410 aa16.97■□□□□ 0.31
CKS1B-202ENST00000368436 IL17RCQ8NAC3 791 aa16.97■□□□□ 0.31
CKS1B-202ENST00000368436 MDGA1Q8NFP4 955 aa16.97■□□□□ 0.31
CKS1B-202ENST00000368436 TCEAL3Q969E4 200 aa16.97■□□□□ 0.31
CKS1B-202ENST00000368436 LSM14BQ9BX40 385 aaKnown RBP16.97■□□□□ 0.31
CKS1B-202ENST00000368436 CCSER2Q9H7U1 834 aa16.97■□□□□ 0.31
CKS1B-202ENST00000368436 ARHGEF4Q9NR80 690 aa16.97■□□□□ 0.31
CKS1B-202ENST00000368436 GMIPQ9P107 970 aa16.97■□□□□ 0.31
CKS1B-202ENST00000368436 A0A1B0GVL5 298 aa16.96■□□□□ 0.31
CKS1B-202ENST00000368436 SGK1O00141 431 aa16.96■□□□□ 0.31
CKS1B-202ENST00000368436 HOXC11O43248 304 aaPredicted RBP16.96■□□□□ 0.31
CKS1B-202ENST00000368436 BEST1O76090 585 aa16.96■□□□□ 0.31
CKS1B-202ENST00000368436 PFKFB1P16118 471 aa16.96■□□□□ 0.31
CKS1B-202ENST00000368436 NDST1P52848 882 aa16.96■□□□□ 0.31
CKS1B-202ENST00000368436 N4BP2L1Q5TBK1 243 aaPredicted RBP16.96■□□□□ 0.31
CKS1B-202ENST00000368436 EMC10Q5UCC4 262 aa16.96■□□□□ 0.31
CKS1B-202ENST00000368436 RNF43Q68DV7 783 aa16.96■□□□□ 0.31
CKS1B-202ENST00000368436 ETFBKMTQ8IXQ9 262 aa16.96■□□□□ 0.31
CKS1B-202ENST00000368436 TXNDC5Q8NBS9 432 aaKnown RBP16.96■□□□□ 0.31
CKS1B-202ENST00000368436 SLC2A14Q8TDB8 520 aa16.96■□□□□ 0.31
CKS1B-202ENST00000368436 KRT82Q9NSB4 513 aa16.96■□□□□ 0.31
CKS1B-202ENST00000368436 TRAF3IP3Q9Y228 551 aa16.96■□□□□ 0.31
CKS1B-202ENST00000368436 HPSEQ9Y251 543 aa16.96■□□□□ 0.31
CKS1B-202ENST00000368436 SH3BP1Q9Y3L3 701 aa16.96■□□□□ 0.31
CKS1B-202ENST00000368436 MAPK13O15264 365 aa16.95■□□□□ 0.3
CKS1B-202ENST00000368436 ADAM23O75077 832 aa16.95■□□□□ 0.3
CKS1B-202ENST00000368436 ALDH1A2O94788 518 aa16.95■□□□□ 0.3
CKS1B-202ENST00000368436 CLSTN1O94985 981 aa16.95■□□□□ 0.3
CKS1B-202ENST00000368436 KLF8O95600 359 aaPredicted RBP16.95■□□□□ 0.3
CKS1B-202ENST00000368436 CCDC130P13994 396 aa16.95■□□□□ 0.3
CKS1B-202ENST00000368436 BCKDHBP21953 392 aa16.95■□□□□ 0.3
CKS1B-202ENST00000368436 PMLP29590 882 aa16.95■□□□□ 0.3
CKS1B-202ENST00000368436 TIE1P35590 1138 aa16.95■□□□□ 0.3
CKS1B-202ENST00000368436 ASPAP45381 313 aa16.95■□□□□ 0.3
CKS1B-202ENST00000368436 PGFP49763 221 aa16.95■□□□□ 0.3
CKS1B-202ENST00000368436 EOGTQ5NDL2 527 aa16.95■□□□□ 0.3
CKS1B-202ENST00000368436 BBS7Q8IWZ6 715 aa16.95■□□□□ 0.3
CKS1B-202ENST00000368436 C12orf29Q8N999 325 aa16.95■□□□□ 0.3
CKS1B-202ENST00000368436 KCNV2Q8TDN2 545 aa16.95■□□□□ 0.3
CKS1B-202ENST00000368436 WBP2Q969T9 261 aa16.95■□□□□ 0.3
CKS1B-202ENST00000368436 FBXO44Q9H4M3 255 aa16.95■□□□□ 0.3
CKS1B-202ENST00000368436 HMGXB4Q9UGU5 601 aa16.95■□□□□ 0.3
CKS1B-202ENST00000368436 EPG5Q9HCE0 2579 aa16.95■□□□□ 0.3
CKS1B-202ENST00000368436 CEP192Q8TEP8 1941 aa16.94■□□□□ 0.3
CKS1B-202ENST00000368436 CALUO43852 315 aaPredicted RBP16.94■□□□□ 0.3
CKS1B-202ENST00000368436 GREM1O60565 184 aa16.94■□□□□ 0.3
CKS1B-202ENST00000368436 TLR5O60602 858 aa16.94■□□□□ 0.3
CKS1B-202ENST00000368436 TULP3O75386 442 aa16.94■□□□□ 0.3
CKS1B-202ENST00000368436 KCNK5O95279 499 aa16.94■□□□□ 0.3
CKS1B-202ENST00000368436 HLA-DRAP01903 254 aa16.94■□□□□ 0.3
CKS1B-202ENST00000368436 P2RY2P41231 377 aa16.94■□□□□ 0.3
CKS1B-202ENST00000368436 MAP3K7CLP57077 242 aa16.94■□□□□ 0.3
CKS1B-202ENST00000368436 KDSRQ06136 332 aa16.94■□□□□ 0.3
CKS1B-202ENST00000368436 INCA1Q0VD86 236 aa16.94■□□□□ 0.3
CKS1B-202ENST00000368436 ORC1Q13415 861 aa16.94■□□□□ 0.3
CKS1B-202ENST00000368436 NFIL3Q16649 462 aa16.94■□□□□ 0.3
CKS1B-202ENST00000368436 CEP135Q66GS9 1140 aa16.94■□□□□ 0.3
CKS1B-202ENST00000368436 SPOPLQ6IQ16 392 aa16.94■□□□□ 0.3
CKS1B-202ENST00000368436 HTR3DQ70Z44 454 aa16.94■□□□□ 0.3
CKS1B-202ENST00000368436 TMEM25Q86YD3 366 aa16.94■□□□□ 0.3
CKS1B-202ENST00000368436 EDEM2Q9BV94 578 aa16.94■□□□□ 0.3
CKS1B-202ENST00000368436 KLF16Q9BXK1 252 aaPredicted RBP16.94■□□□□ 0.3
CKS1B-202ENST00000368436 POLMQ9NP87 494 aaPredicted RBP16.94■□□□□ 0.3
CKS1B-202ENST00000368436 TLR8Q9NR97 1041 aaKnown RBP16.94■□□□□ 0.3
CKS1B-202ENST00000368436 SPHK2Q9NRA0 654 aa16.94■□□□□ 0.3
CKS1B-202ENST00000368436 FRMD4BQ9Y2L6 1034 aa16.94■□□□□ 0.3
CKS1B-202ENST00000368436 CACNA1BQ00975 2339 aa16.93■□□□□ 0.3
CKS1B-202ENST00000368436 FAM237AA0A1B0GTK4 181 aa16.93■□□□□ 0.3
CKS1B-202ENST00000368436 LNP1A1A4G5 178 aa16.93■□□□□ 0.3
CKS1B-202ENST00000368436 HHLA1C9JL84 531 aa16.93■□□□□ 0.3
CKS1B-202ENST00000368436 KHNYNO15037 678 aaKnown RBP16.93■□□□□ 0.3
CKS1B-202ENST00000368436 VAMP7P51809 220 aa16.93■□□□□ 0.3
CKS1B-202ENST00000368436 PREPLQ4J6C6 727 aaPredicted RBP16.93■□□□□ 0.3
CKS1B-202ENST00000368436 BTBD8Q5XKL5 378 aa16.93■□□□□ 0.3
CKS1B-202ENST00000368436 TTC30AQ86WT1 665 aa16.93■□□□□ 0.3
CKS1B-202ENST00000368436 NAT16Q8N8M0 369 aa16.93■□□□□ 0.3
CKS1B-202ENST00000368436 WHAMMQ8TF30 809 aa16.93■□□□□ 0.3
CKS1B-202ENST00000368436 TWNKQ96RR1 684 aa16.93■□□□□ 0.3
CKS1B-202ENST00000368436 HNRNPABQ99729 332 aaKnown RBP16.93■□□□□ 0.3
CKS1B-202ENST00000368436 ZDHHC4Q9NPG8 344 aa16.93■□□□□ 0.3
CKS1B-202ENST00000368436 CYLDQ9NQC7 956 aa16.93■□□□□ 0.3
CKS1B-202ENST00000368436 FAM49BQ9NUQ9 324 aa16.93■□□□□ 0.3
CKS1B-202ENST00000368436 DEC1Q9P2X7 70 aa16.93■□□□□ 0.3
CKS1B-202ENST00000368436 SCML2Q9UQR0 700 aa16.93■□□□□ 0.3
CKS1B-202ENST00000368436 STARD13Q9Y3M8 1113 aa16.93■□□□□ 0.3
CKS1B-202ENST00000368436 TBC1D3BA6NDS4 549 aa16.92■□□□□ 0.3
CKS1B-202ENST00000368436 C4orf47A7E2U8 309 aa16.92■□□□□ 0.3
CKS1B-202ENST00000368436 RHOBTB3O94955 611 aa16.92■□□□□ 0.3
CKS1B-202ENST00000368436 KIF20AO95235 890 aa16.92■□□□□ 0.3
CKS1B-202ENST00000368436 FAM200BP0CF97 657 aa16.92■□□□□ 0.3
CKS1B-202ENST00000368436 PIK3CAP42336 1068 aa16.92■□□□□ 0.3
CKS1B-202ENST00000368436 MCCD1P59942 119 aaPredicted RBP16.92■□□□□ 0.3
CKS1B-202ENST00000368436 SHC2P98077 582 aa16.92■□□□□ 0.3
CKS1B-202ENST00000368436 ENPEPQ07075 957 aa16.92■□□□□ 0.3
CKS1B-202ENST00000368436 MAP7D1Q3KQU3 841 aa16.92■□□□□ 0.3
CKS1B-202ENST00000368436 CLEC20AQ6ZU45 233 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms