RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 SMYD5Q6GMV2 418 aa23.62■■□□□ 1.37
ECHDC1-203ENST00000368291 PM20D1Q6GTS8 502 aa23.62■■□□□ 1.37
ECHDC1-203ENST00000368291 PMF1Q6P1K2 205 aa23.62■■□□□ 1.37
ECHDC1-203ENST00000368291 BHLHA9Q7RTU4 235 aa23.62■■□□□ 1.37
ECHDC1-203ENST00000368291 ZNF606Q8WXB4 792 aa23.62■■□□□ 1.37
ECHDC1-203ENST00000368291 KCTD13Q8WZ19 329 aa23.62■■□□□ 1.37
ECHDC1-203ENST00000368291 SECISBP2LQ93073 1101 aaKnown RBP23.62■■□□□ 1.37
ECHDC1-203ENST00000368291 SHDQ96IW2 340 aa23.62■■□□□ 1.37
ECHDC1-203ENST00000368291 PLCB1Q9NQ66 1216 aa23.62■■□□□ 1.37
ECHDC1-203ENST00000368291 SMPD4Q9NXE4 827 aa23.62■■□□□ 1.37
ECHDC1-203ENST00000368291 M0QYV0 167 aa23.61■■□□□ 1.37
ECHDC1-203ENST00000368291 TBX18O95935 607 aa23.61■■□□□ 1.37
ECHDC1-203ENST00000368291 MBL2P11226 248 aaPredicted RBP23.61■■□□□ 1.37
ECHDC1-203ENST00000368291 UCHL3P15374 230 aa23.61■■□□□ 1.37
ECHDC1-203ENST00000368291 GNA15P30679 374 aa23.61■■□□□ 1.37
ECHDC1-203ENST00000368291 USP8P40818 1118 aa23.61■■□□□ 1.37
ECHDC1-203ENST00000368291 ULBP1Q9BZM6 244 aa23.61■■□□□ 1.37
ECHDC1-203ENST00000368291 FOXQ1Q9C009 403 aa23.61■■□□□ 1.37
ECHDC1-203ENST00000368291 GANQ9H2C0 597 aa23.61■■□□□ 1.37
ECHDC1-203ENST00000368291 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.61■■□□□ 1.37
ECHDC1-203ENST00000368291 RAPGEFL1Q9UHV5 662 aa23.61■■□□□ 1.37
ECHDC1-203ENST00000368291 SIK3Q9Y2K2 1263 aa23.61■■□□□ 1.37
ECHDC1-203ENST00000368291 KANSL1LA0AUZ9 987 aa23.6■■□□□ 1.37
ECHDC1-203ENST00000368291 OTOL1A6NHN0 477 aaPredicted RBP23.6■■□□□ 1.37
ECHDC1-203ENST00000368291 LGALS16A8MUM7 142 aa23.6■■□□□ 1.37
ECHDC1-203ENST00000368291 CDK11BP21127 795 aaKnown RBP23.6■■□□□ 1.37
ECHDC1-203ENST00000368291 CLCN1P35523 988 aa23.6■■□□□ 1.37
ECHDC1-203ENST00000368291 GPD2P43304 727 aa23.6■■□□□ 1.37
ECHDC1-203ENST00000368291 MLLT6P55198 1093 aaPredicted RBP23.6■■□□□ 1.37
ECHDC1-203ENST00000368291 ADIGQ0VDE8 80 aa23.6■■□□□ 1.37
ECHDC1-203ENST00000368291 DRAP1Q14919 205 aaPredicted RBP23.6■■□□□ 1.37
ECHDC1-203ENST00000368291 ZSCAN23Q3MJ62 389 aa23.6■■□□□ 1.37
ECHDC1-203ENST00000368291 FAM71AQ8IYT1 594 aa23.6■■□□□ 1.37
ECHDC1-203ENST00000368291 TTC16Q8NEE8 873 aa23.6■■□□□ 1.37
ECHDC1-203ENST00000368291 CSGALNACT1Q8TDX6 532 aa23.6■■□□□ 1.37
ECHDC1-203ENST00000368291 NDRG1Q92597 394 aaKnown RBP23.6■■□□□ 1.37
ECHDC1-203ENST00000368291 EBF3Q9H4W6 596 aa23.6■■□□□ 1.37
ECHDC1-203ENST00000368291 NUDT5Q9UKK9 219 aa23.6■■□□□ 1.37
ECHDC1-203ENST00000368291 MTF2Q9Y483 593 aaPredicted RBP23.6■■□□□ 1.37
ECHDC1-203ENST00000368291 PIAS3Q9Y6X2 628 aa23.6■■□□□ 1.37
ECHDC1-203ENST00000368291 SMTNL1A8MU46 457 aa23.59■■□□□ 1.37
ECHDC1-203ENST00000368291 STK25O00506 426 aa23.59■■□□□ 1.37
ECHDC1-203ENST00000368291 THAP12O43422 761 aa23.59■■□□□ 1.37
ECHDC1-203ENST00000368291 ZBED1O96006 694 aa23.59■■□□□ 1.37
ECHDC1-203ENST00000368291 TPM2P07951 284 aa23.59■■□□□ 1.37
ECHDC1-203ENST00000368291 RARGP13631 454 aa23.59■■□□□ 1.37
ECHDC1-203ENST00000368291 ARSAP15289 507 aa23.59■■□□□ 1.37
ECHDC1-203ENST00000368291 COL9A1P20849 921 aa23.59■■□□□ 1.37
ECHDC1-203ENST00000368291 SOX9P48436 509 aa23.59■■□□□ 1.37
ECHDC1-203ENST00000368291 PSEN1P49768 467 aa23.59■■□□□ 1.37
ECHDC1-203ENST00000368291 RGS7P49802 495 aa23.59■■□□□ 1.37
ECHDC1-203ENST00000368291 FKBP15Q5T1M5 1219 aa23.59■■□□□ 1.37
ECHDC1-203ENST00000368291 DENND1BQ6P3S1 775 aa23.59■■□□□ 1.37
ECHDC1-203ENST00000368291 ZNF276Q8N554 614 aa23.59■■□□□ 1.37
ECHDC1-203ENST00000368291 ANKRD20A12PQ8NF67 263 aa23.59■■□□□ 1.37
ECHDC1-203ENST00000368291 PJA1Q8NG27 643 aa23.59■■□□□ 1.37
ECHDC1-203ENST00000368291 TTC8Q8TAM2 541 aa23.59■■□□□ 1.37
ECHDC1-203ENST00000368291 OSCP1Q8WVF1 389 aa23.59■■□□□ 1.37
ECHDC1-203ENST00000368291 WBP2Q969T9 261 aa23.59■■□□□ 1.37
ECHDC1-203ENST00000368291 LINC00597Q9H2U6 94 aa23.59■■□□□ 1.37
ECHDC1-203ENST00000368291 LRRC4Q9HBW1 653 aa23.59■■□□□ 1.37
ECHDC1-203ENST00000368291 CLIC5Q9NZA1 410 aa23.59■■□□□ 1.37
ECHDC1-203ENST00000368291 NAGPAQ9UK23 515 aa23.59■■□□□ 1.37
ECHDC1-203ENST00000368291 WNT6Q9Y6F9 365 aa23.59■■□□□ 1.37
ECHDC1-203ENST00000368291 WDFY4Q6ZS81 3184 aa23.59■■□□□ 1.37
ECHDC1-203ENST00000368291 EPHB6O15197 1021 aa23.58■■□□□ 1.37
ECHDC1-203ENST00000368291 GLULP15104 373 aa23.58■■□□□ 1.37
ECHDC1-203ENST00000368291 RPL34P49207 117 aaKnown RBP23.58■■□□□ 1.37
ECHDC1-203ENST00000368291 RUNX3Q13761 415 aa23.58■■□□□ 1.37
ECHDC1-203ENST00000368291 RAPGEF1Q13905 1077 aa23.58■■□□□ 1.37
ECHDC1-203ENST00000368291 MEA1Q16626 185 aa23.58■■□□□ 1.37
ECHDC1-203ENST00000368291 EML3Q32P44 896 aa23.58■■□□□ 1.37
ECHDC1-203ENST00000368291 CC2D1AQ6P1N0 951 aaPredicted RBP23.58■■□□□ 1.37
ECHDC1-203ENST00000368291 ZNF687Q8N1G0 1237 aa23.58■■□□□ 1.37
ECHDC1-203ENST00000368291 SCML4Q8N228 414 aa23.58■■□□□ 1.37
ECHDC1-203ENST00000368291 CHFRQ96EP1 664 aa23.58■■□□□ 1.37
ECHDC1-203ENST00000368291 LTB4R2Q9NPC1 389 aa23.58■■□□□ 1.37
ECHDC1-203ENST00000368291 DUS2Q9NX74 493 aaKnown RBP23.58■■□□□ 1.37
ECHDC1-203ENST00000368291 DLGAP2Q9P1A6 1054 aa23.58■■□□□ 1.37
ECHDC1-203ENST00000368291 CYTH4Q9UIA0 394 aa23.58■■□□□ 1.37
ECHDC1-203ENST00000368291 MED7O43513 233 aa23.57■■□□□ 1.36
ECHDC1-203ENST00000368291 RFX1P22670 979 aa23.57■■□□□ 1.36
ECHDC1-203ENST00000368291 TARSP26639 723 aaKnown RBP23.57■■□□□ 1.36
ECHDC1-203ENST00000368291 FZD5Q13467 585 aa23.57■■□□□ 1.36
ECHDC1-203ENST00000368291 PDGFRLQ15198 375 aa23.57■■□□□ 1.36
ECHDC1-203ENST00000368291 ITPRIPL2Q3MIP1 535 aa23.57■■□□□ 1.36
ECHDC1-203ENST00000368291 SLC47A2Q86VL8 602 aa23.57■■□□□ 1.36
ECHDC1-203ENST00000368291 CCDC105Q8IYK2 499 aa23.57■■□□□ 1.36
ECHDC1-203ENST00000368291 KIAA1958Q8N8K9 716 aa23.57■■□□□ 1.36
ECHDC1-203ENST00000368291 HSFY1Q96LI6 401 aa23.57■■□□□ 1.36
ECHDC1-203ENST00000368291 KLF16Q9BXK1 252 aaPredicted RBP23.57■■□□□ 1.36
ECHDC1-203ENST00000368291 CBX8Q9HC52 389 aa23.57■■□□□ 1.36
ECHDC1-203ENST00000368291 CFAP97Q9P2B7 532 aa23.57■■□□□ 1.36
ECHDC1-203ENST00000368291 SIT1Q9Y3P8 196 aa23.57■■□□□ 1.36
ECHDC1-203ENST00000368291 PIK3R2O00459 728 aa23.56■■□□□ 1.36
ECHDC1-203ENST00000368291 SCAMP3O14828 347 aaKnown RBP23.56■■□□□ 1.36
ECHDC1-203ENST00000368291 MDM4O15151 490 aa23.56■■□□□ 1.36
ECHDC1-203ENST00000368291 LCP1P13796 627 aa23.56■■□□□ 1.36
ECHDC1-203ENST00000368291 CTHP32929 405 aa23.56■■□□□ 1.36
ECHDC1-203ENST00000368291 ATP5C1P36542 298 aaKnown RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms