RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 SCNN1GP51170 649 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 ZNF177Q13360 481 aaPredicted RBP12.74□□□□□ -0.37
PTPRK-203ENST00000368207 SKIV2LQ15477 1246 aaKnown RBP12.74□□□□□ -0.37
PTPRK-203ENST00000368207 C15orf59Q2T9L4 293 aaPredicted RBP12.74□□□□□ -0.37
PTPRK-203ENST00000368207 ATP13A4Q4VNC1 1196 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 ERMARDQ5T6L9 678 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 DLK2Q6UY11 383 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 TRPM8Q7Z2W7 1104 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 IRF2BP2Q7Z5L9 587 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 KIF2BQ8N4N8 673 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 CALML6Q8TD86 181 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 MANSC1Q9H8J5 431 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 SAE1Q9UBE0 346 aaPredicted RBP12.74□□□□□ -0.37
PTPRK-203ENST00000368207 STOML1Q9UBI4 398 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 KCPQ6ZWJ8 1503 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 F5H5T6 163 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 SYF2O95926 243 aaKnown RBP12.74□□□□□ -0.37
PTPRK-203ENST00000368207 LRG1P02750 347 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 NCKAP1LP55160 1127 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 ZRANB3Q5FWF4 1079 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 ABHD15Q6UXT9 468 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 KDM7AQ6ZMT4 941 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 YAF2Q8IY57 180 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 FAM136AQ96C01 138 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 SENP8Q96LD8 212 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 PAFAH2Q99487 392 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 TRPV2Q9Y5S1 764 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 TRIM66O15016 1216 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 USP2O75604 605 aaPredicted RBP12.74□□□□□ -0.37
PTPRK-203ENST00000368207 HMGCRP04035 888 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 SMIM10L2AP0DMW4 78 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 SMIM10L2BP0DMW5 78 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 RFC1P35251 1148 aaPredicted RBP12.74□□□□□ -0.37
PTPRK-203ENST00000368207 MLH1P40692 756 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 FMO1Q01740 532 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 CAPRIN1Q14444 709 aaKnown RBP12.74□□□□□ -0.37
PTPRK-203ENST00000368207 PLPPR4Q7Z2D5 763 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 RNF217Q8TC41 542 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 CINPQ9BW66 212 aaPredicted RBP12.74□□□□□ -0.37
PTPRK-203ENST00000368207 PCDH9Q9HC56 1237 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 ORC6Q9Y5N6 252 aa12.74□□□□□ -0.37
PTPRK-203ENST00000368207 PARP4Q9UKK3 1724 aaKnown RBP12.74□□□□□ -0.37
PTPRK-203ENST00000368207 LOC100653049A0A140TA62 436 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 TBKBP1A7MCY6 615 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 KRT34O76011 436 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 EEF1B2P24534 225 aaKnown RBP12.73□□□□□ -0.37
PTPRK-203ENST00000368207 FAM171A1Q5VUB5 890 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 LINC00523Q86TU6 105 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 COLGALT1Q8NBJ5 622 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 CAVIN3Q969G5 261 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 SH3KBP1Q96B97 665 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 HAUS8Q9BT25 410 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 SHCBP1LQ9BZQ2 653 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 REXO2Q9Y3B8 237 aaKnown RBP12.73□□□□□ -0.37
PTPRK-203ENST00000368207 IGLV3-22A0A075B6J6 115 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 CFAP73A6NFT4 308 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 EIF4E1BA6NMX2 242 aaKnown RBP12.73□□□□□ -0.37
PTPRK-203ENST00000368207 LYPLA2O95372 231 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 PECAM1P16284 738 aaPredicted RBP12.73□□□□□ -0.37
PTPRK-203ENST00000368207 CHRM3P20309 590 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 AXLP30530 894 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 PBX1P40424 430 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 RPL10AP62906 217 aaKnown RBP12.73□□□□□ -0.37
PTPRK-203ENST00000368207 BMPR2Q13873 1038 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 RABGAP1LQ5R372 815 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 PTRHD1Q6GMV3 140 aaKnown RBP12.73□□□□□ -0.37
PTPRK-203ENST00000368207 TFAP2DQ7Z6R9 452 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 GIPC2Q8TF65 315 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 CAMKK2Q96RR4 588 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 SPDYE5A6NIY4 337 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 STX7O15400 261 aaKnown RBP12.73□□□□□ -0.37
PTPRK-203ENST00000368207 RPLP2P05387 115 aaKnown RBP12.73□□□□□ -0.37
PTPRK-203ENST00000368207 ZSCAN5DPP0CG00 497 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 MBL2P11226 248 aaPredicted RBP12.73□□□□□ -0.37
PTPRK-203ENST00000368207 BDNFP23560 247 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 SLC6A3Q01959 620 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 TTC36A6NLP5 189 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 H7C4K7 107 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 SASH3O75995 380 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 CPA2P48052 419 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 GEMP55040 296 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 CSE1LP55060 971 aaKnown RBP12.73□□□□□ -0.37
PTPRK-203ENST00000368207 MAP2K5Q13163 448 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 FBXW10Q5XX13 1052 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 WSCD1Q658N2 575 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 NT5DC4Q86YG4 428 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 MYCBPAPQ8TBZ2 947 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 ZC3H15Q8WU90 426 aaKnown RBP12.73□□□□□ -0.37
PTPRK-203ENST00000368207 BSNDQ8WZ55 320 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 KAT2BQ92831 832 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 YME1L1Q96TA2 773 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 EML4Q9HC35 981 aaKnown RBP12.73□□□□□ -0.37
PTPRK-203ENST00000368207 PSD3Q9NYI0 1048 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 TRPM5Q9NZQ8 1165 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 SCOCQ9UIL1 159 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 CDY2AQ9Y6F7 541 aa12.73□□□□□ -0.37
PTPRK-203ENST00000368207 COL14A1Q05707 1796 aaKnown RBP12.72□□□□□ -0.37
PTPRK-203ENST00000368207 SLC15A5A6NIM6 579 aa12.72□□□□□ -0.37
PTPRK-203ENST00000368207 HOXA2O43364 376 aa12.72□□□□□ -0.37
PTPRK-203ENST00000368207 LMNAP02545 664 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms