RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 FAM205CA6NFA0 338 aa16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 RAG1P15918 1043 aa16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 STK4Q13043 487 aa16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 KYNUQ16719 465 aa16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 RABL6Q3YEC7 729 aaPredicted RBP16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 SMIM5Q71RC9 77 aa16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 RD3Q7Z3Z2 195 aa16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 TRMT11Q7Z4G4 463 aaKnown RBP16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 MTG1Q9BT17 334 aaPredicted RBP16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 TRIM8Q9BZR9 551 aa16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 MTMR12Q9C0I1 747 aa16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 ELOVL6Q9H5J4 265 aa16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 TMEM39AQ9NV64 488 aa16.2■□□□□ 0.18
NUCKS1-201ENST00000367142 CYP7B1O75881 506 aa16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 FGFR1P11362 822 aa16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 FGFR2P21802 821 aa16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 PPIL2Q13356 520 aa16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 CAPRIN2Q6IMN6 1127 aaKnown RBP16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 MIER2Q8N344 545 aa16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 ACSF2Q96CM8 615 aaPredicted RBP16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 PCDHB5Q9Y5E4 795 aa16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 TMEM120BA0PK00 339 aa16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 HNRNPCP07910 306 aaKnown RBP eCLIP16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 CHRNB3Q05901 458 aa16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 SH3GL1Q99961 368 aa16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 ADAM30Q9UKF2 790 aa16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 ZNF839A8K0R7 811 aa16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 RBP1P09455 135 aa16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 CYLC2Q14093 348 aaPredicted RBP16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 RETSATQ6NUM9 610 aa16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 TTC33Q6PID6 262 aaPredicted RBP16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 HASPINQ8TF76 798 aa16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 MTERF3Q96E29 417 aa16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 SERAC1Q96JX3 654 aa16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 OXCT2Q9BYC2 517 aaPredicted RBP16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 GPR75-ASB3A0A0A6YYF3 556 aa16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 RPN2P04844 631 aa16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 CYP2A6P11509 494 aaPredicted RBP16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 SERPINB1P30740 379 aa16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 ST13P50502 369 aaKnown RBP16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 MTF1Q14872 753 aa16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 EZH2Q15910 746 aaKnown RBP16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 FAM172AQ8WUF8 416 aa16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 ADI1Q9BV57 179 aa16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 GANQ9H2C0 597 aa16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 TRPC4Q9UBN4 977 aa16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 CPA4Q9UI42 421 aa16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 GTF3C4Q9UKN8 822 aa16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 SATB2Q9UPW6 733 aa16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 MSH4O15457 936 aa16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 SKP1P63208 163 aa16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 MCOLN3Q8TDD5 553 aa16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 SERPINB12Q96P63 405 aa16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 AGPAT3Q9NRZ7 376 aa16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 PCDHGA4Q9Y5G9 962 aa16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 LAMC1P11047 1609 aa16.19■□□□□ 0.18
NUCKS1-201ENST00000367142 KANSL1LA0AUZ9 987 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 ATP6AP1LQ52LC2 224 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 C1QTNF7Q9BXJ2 289 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 MRPL9Q9BYD2 267 aaKnown RBP16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 ZNF518BQ9C0D4 1074 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 DIABLOQ9NR28 239 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 SPATA31E1Q6ZUB1 1445 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 PDZK1P1A8MUH7 402 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 MTA2O94776 668 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 ORC1Q13415 861 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 ATAD3BQ5T9A4 648 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 CAAP1Q9H8G2 361 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 VIPAS39Q9H9C1 493 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 AGPAT5Q9NUQ2 364 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 GRK4P32298 578 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 NFYCQ13952 458 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 TRAF7Q6Q0C0 670 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 MAGED4Q96JG8 741 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 CHP1Q99653 195 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 UXTQ9UBK9 157 aaPredicted RBP16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 CNTNAP4Q9C0A0 1308 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 USP27XA6NNY8 438 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 TEX28O15482 410 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 RAD51CO43502 376 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 TBC1D12O60347 775 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 KCNA3P22001 575 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 CCNG1P51959 295 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 BACE1P56817 501 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 PLIN5Q00G26 463 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 BTG3Q14201 252 aaPredicted RBP16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 ENGASEQ8NFI3 743 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 NT5MQ9NPB1 228 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 LOC100653049A0A140TA62 436 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 XPO1O14980 1071 aaKnown RBP16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 KRT34O76011 436 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 BST2Q10589 180 aaKnown RBP16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 PPM1LQ5SGD2 360 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 SNX30Q5VWJ9 437 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 RINLQ6ZS11 566 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 RASGRP2Q7LDG7 609 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 FBXO33Q7Z6M2 555 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 KAT2BQ92831 832 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 ERP44Q9BS26 406 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 SHCBP1LQ9BZQ2 653 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms