RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 AGPAT3Q9NRZ7 376 aa13.17□□□□□ -0.3
MRPL55-209ENST00000366735 KBTBD4Q9NVX7 518 aa13.17□□□□□ -0.3
MRPL55-209ENST00000366735 POLR3BQ9NW08 1133 aaPredicted RBP13.17□□□□□ -0.3
MRPL55-209ENST00000366735 CFAP97Q9P2B7 532 aa13.17□□□□□ -0.3
MRPL55-209ENST00000366735 A0A087X0B3 334 aa13.16□□□□□ -0.3
MRPL55-209ENST00000366735 E2F8A0AVK6 867 aa13.16□□□□□ -0.3
MRPL55-209ENST00000366735 C4orf47A7E2U8 309 aa13.16□□□□□ -0.3
MRPL55-209ENST00000366735 K7EQS6 105 aa13.16□□□□□ -0.3
MRPL55-209ENST00000366735 ZBTB24O43167 697 aaPredicted RBP13.16□□□□□ -0.3
MRPL55-209ENST00000366735 KAT7O95251 611 aa13.16□□□□□ -0.3
MRPL55-209ENST00000366735 P4HA1P13674 534 aa13.16□□□□□ -0.3
MRPL55-209ENST00000366735 PTPN1P18031 435 aaKnown RBP13.16□□□□□ -0.3
MRPL55-209ENST00000366735 YWHAQP27348 245 aa13.16□□□□□ -0.3
MRPL55-209ENST00000366735 GRIA2P42262 883 aa13.16□□□□□ -0.3
MRPL55-209ENST00000366735 CYP2J2P51589 502 aa13.16□□□□□ -0.3
MRPL55-209ENST00000366735 AP3M2P53677 418 aa13.16□□□□□ -0.3
MRPL55-209ENST00000366735 USP46P62068 366 aa13.16□□□□□ -0.3
MRPL55-209ENST00000366735 GAD2Q05329 585 aa13.16□□□□□ -0.3
MRPL55-209ENST00000366735 ZNF252P-AS1Q0IIN9 211 aa13.16□□□□□ -0.3
MRPL55-209ENST00000366735 TAF10Q12962 218 aa13.16□□□□□ -0.3
MRPL55-209ENST00000366735 CCDC33Q8N5R6 958 aa13.16□□□□□ -0.3
MRPL55-209ENST00000366735 RDH13Q8NBN7 331 aa13.16□□□□□ -0.3
MRPL55-209ENST00000366735 ZNF507Q8TCN5 953 aa13.16□□□□□ -0.3
MRPL55-209ENST00000366735 FBXO32Q969P5 355 aa13.16□□□□□ -0.3
MRPL55-209ENST00000366735 CCDC127Q96BQ5 260 aa13.16□□□□□ -0.3
MRPL55-209ENST00000366735 MRPL45Q9BRJ2 306 aaKnown RBP13.16□□□□□ -0.3
MRPL55-209ENST00000366735 NUSAP1Q9BXS6 441 aaKnown RBP13.16□□□□□ -0.3
MRPL55-209ENST00000366735 NACA2Q9H009 215 aa13.16□□□□□ -0.3
MRPL55-209ENST00000366735 ARHGEF4Q9NR80 690 aa13.16□□□□□ -0.3
MRPL55-209ENST00000366735 SMPD4Q9NXE4 827 aa13.16□□□□□ -0.3
MRPL55-209ENST00000366735 USP25Q9UHP3 1055 aa13.16□□□□□ -0.3
MRPL55-209ENST00000366735 SH3BP1Q9Y3L3 701 aa13.16□□□□□ -0.3
MRPL55-209ENST00000366735 LAMA1P25391 3075 aa13.16□□□□□ -0.3
MRPL55-209ENST00000366735 CHD8Q9HCK8 2581 aa13.15□□□□□ -0.3
MRPL55-209ENST00000366735 KLF8O95600 359 aaPredicted RBP13.15□□□□□ -0.3
MRPL55-209ENST00000366735 CEACAM1P13688 526 aa13.15□□□□□ -0.3
MRPL55-209ENST00000366735 CSRP1P21291 193 aaKnown RBP13.15□□□□□ -0.3
MRPL55-209ENST00000366735 TIE1P35590 1138 aa13.15□□□□□ -0.3
MRPL55-209ENST00000366735 TNFRSF4P43489 277 aa13.15□□□□□ -0.3
MRPL55-209ENST00000366735 TUBP50607 506 aa13.15□□□□□ -0.3
MRPL55-209ENST00000366735 GOLGA8FQ08AF8 430 aa13.15□□□□□ -0.3
MRPL55-209ENST00000366735 GOLGA8DPQ0D2H9 430 aa13.15□□□□□ -0.3
MRPL55-209ENST00000366735 BIRC3Q13489 604 aa13.15□□□□□ -0.3
MRPL55-209ENST00000366735 CAMK4Q16566 473 aa13.15□□□□□ -0.3
MRPL55-209ENST00000366735 ZNF699Q32M78 642 aa13.15□□□□□ -0.3
MRPL55-209ENST00000366735 SPDYCQ5MJ68 293 aa13.15□□□□□ -0.3
MRPL55-209ENST00000366735 HECTD3Q5T447 861 aa13.15□□□□□ -0.3
MRPL55-209ENST00000366735 CNNM4Q6P4Q7 775 aa13.15□□□□□ -0.3
MRPL55-209ENST00000366735 UNC13DQ70J99 1090 aa13.15□□□□□ -0.3
MRPL55-209ENST00000366735 EPM2AIP1Q7L775 607 aaPredicted RBP13.15□□□□□ -0.3
MRPL55-209ENST00000366735 RABEPKQ7Z6M1 372 aa13.15□□□□□ -0.3
MRPL55-209ENST00000366735 ADGRG2Q8IZP9 1017 aa13.15□□□□□ -0.3
MRPL55-209ENST00000366735 PGBD3Q8N328 593 aa13.15□□□□□ -0.3
MRPL55-209ENST00000366735 ALLCQ8N6M5 410 aa13.15□□□□□ -0.3
MRPL55-209ENST00000366735 TXNDC5Q8NBS9 432 aaKnown RBP13.15□□□□□ -0.3
MRPL55-209ENST00000366735 GOLGA5Q8TBA6 731 aa13.15□□□□□ -0.3
MRPL55-209ENST00000366735 DHX58Q96C10 678 aa13.15□□□□□ -0.3
MRPL55-209ENST00000366735 SMARCD1Q96GM5 515 aa13.15□□□□□ -0.3
MRPL55-209ENST00000366735 MED10Q9BTT4 135 aa13.15□□□□□ -0.3
MRPL55-209ENST00000366735 TSPY26PQ9H489 355 aa13.15□□□□□ -0.3
MRPL55-209ENST00000366735 DMAP1Q9NPF5 467 aaPredicted RBP13.15□□□□□ -0.3
MRPL55-209ENST00000366735 COMMD8Q9NX08 183 aa13.15□□□□□ -0.3
MRPL55-209ENST00000366735 NXF1Q9UBU9 619 aaKnown RBP13.15□□□□□ -0.3
MRPL55-209ENST00000366735 EVLQ9UI08 416 aaPredicted RBP13.15□□□□□ -0.3
MRPL55-209ENST00000366735 INVSQ9Y283 1065 aa13.15□□□□□ -0.3
MRPL55-209ENST00000366735 TNFRSF10BO14763 440 aa13.14□□□□□ -0.31
MRPL55-209ENST00000366735 CLIC2O15247 247 aa13.14□□□□□ -0.31
MRPL55-209ENST00000366735 EXOC3O60645 756 aa13.14□□□□□ -0.31
MRPL55-209ENST00000366735 HOXD12P35452 270 aa13.14□□□□□ -0.31
MRPL55-209ENST00000366735 KDSRQ06136 332 aa13.14□□□□□ -0.31
MRPL55-209ENST00000366735 ZNF667Q5HYK9 610 aa13.14□□□□□ -0.31
MRPL55-209ENST00000366735 SH3PXD2AQ5TCZ1 1133 aa13.14□□□□□ -0.31
MRPL55-209ENST00000366735 SCARA3Q6AZY7 606 aa13.14□□□□□ -0.31
MRPL55-209ENST00000366735 KRBA2Q6ZNG9 492 aa13.14□□□□□ -0.31
MRPL55-209ENST00000366735 FAM35AQ86V20 835 aa13.14□□□□□ -0.31
MRPL55-209ENST00000366735 NELFCDQ8IXH7 590 aa13.14□□□□□ -0.31
MRPL55-209ENST00000366735 C12orf56Q8IXR9 622 aa13.14□□□□□ -0.31
MRPL55-209ENST00000366735 IL17RCQ8NAC3 791 aa13.14□□□□□ -0.31
MRPL55-209ENST00000366735 PIGKQ92643 395 aa13.14□□□□□ -0.31
MRPL55-209ENST00000366735 DUSP9Q99956 384 aaKnown RBP13.14□□□□□ -0.31
MRPL55-209ENST00000366735 C7orf25Q9BPX7 421 aa13.14□□□□□ -0.31
MRPL55-209ENST00000366735 ZNF518BQ9C0D4 1074 aa13.14□□□□□ -0.31
MRPL55-209ENST00000366735 RNF38Q9H0F5 515 aa13.14□□□□□ -0.31
MRPL55-209ENST00000366735 SLC32A1Q9H598 525 aa13.14□□□□□ -0.31
MRPL55-209ENST00000366735 ASCC3Q8N3C0 2202 aaKnown RBP13.14□□□□□ -0.31
MRPL55-209ENST00000366735 TCRBV21S2A2A0A5A6 115 aa13.13□□□□□ -0.31
MRPL55-209ENST00000366735 TMEM8BA6NDV4 472 aa13.13□□□□□ -0.31
MRPL55-209ENST00000366735 HOXC11O43248 304 aaPredicted RBP13.13□□□□□ -0.31
MRPL55-209ENST00000366735 AP5Z1O43299 807 aa13.13□□□□□ -0.31
MRPL55-209ENST00000366735 PROS1P07225 676 aa13.13□□□□□ -0.31
MRPL55-209ENST00000366735 BCKDHBP21953 392 aa13.13□□□□□ -0.31
MRPL55-209ENST00000366735 P2RY2P41231 377 aa13.13□□□□□ -0.31
MRPL55-209ENST00000366735 ATXN3P54252 364 aaPredicted RBP13.13□□□□□ -0.31
MRPL55-209ENST00000366735 ZXDBP98169 803 aa13.13□□□□□ -0.31
MRPL55-209ENST00000366735 FOXC1Q12948 553 aa13.13□□□□□ -0.31
MRPL55-209ENST00000366735 GAB4Q2WGN9 574 aa13.13□□□□□ -0.31
MRPL55-209ENST00000366735 TRIM61Q5EBN2 209 aa13.13□□□□□ -0.31
MRPL55-209ENST00000366735 LYSMD4Q5XG99 296 aa13.13□□□□□ -0.31
MRPL55-209ENST00000366735 SLC36A4Q6YBV0 504 aa13.13□□□□□ -0.31
MRPL55-209ENST00000366735 SYT12Q8IV01 421 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms