RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 FAM234AQ9H0X4 552 aa2.92□□□□□ -1.94
RNU4-42P-201ENST00000364738 NMRK2Q9NPI5 230 aa2.92□□□□□ -1.94
RNU4-42P-201ENST00000364738 MGAT4CQ9UBM8 478 aa2.92□□□□□ -1.94
RNU4-42P-201ENST00000364738 GABBR1Q9UBS5 961 aa2.92□□□□□ -1.94
RNU4-42P-201ENST00000364738 PAXBP1Q9Y5B6 917 aa2.92□□□□□ -1.94
RNU4-42P-201ENST00000364738 HS3ST3B1Q9Y662 390 aa2.92□□□□□ -1.94
RNU4-42P-201ENST00000364738 LOC102723971A0A1B0GUV8 181 aa2.91□□□□□ -1.94
RNU4-42P-201ENST00000364738 CLIC1O00299 241 aa2.91□□□□□ -1.94
RNU4-42P-201ENST00000364738 CD3EAPO15446 510 aaKnown RBP2.91□□□□□ -1.94
RNU4-42P-201ENST00000364738 PHGDHO43175 533 aaKnown RBP2.91□□□□□ -1.94
RNU4-42P-201ENST00000364738 CNOT3O75175 753 aaKnown RBP2.91□□□□□ -1.94
RNU4-42P-201ENST00000364738 TULP3O75386 442 aa2.91□□□□□ -1.94
RNU4-42P-201ENST00000364738 UBXN7O94888 489 aa2.91□□□□□ -1.94
RNU4-42P-201ENST00000364738 CTSAP10619 480 aa2.91□□□□□ -1.94
RNU4-42P-201ENST00000364738 HGFP14210 728 aa2.91□□□□□ -1.94
RNU4-42P-201ENST00000364738 HSPA6P17066 643 aa2.91□□□□□ -1.94
RNU4-42P-201ENST00000364738 EN2P19622 333 aaPredicted RBP2.91□□□□□ -1.94
RNU4-42P-201ENST00000364738 TIRAPP58753 221 aa2.91□□□□□ -1.94
RNU4-42P-201ENST00000364738 TIAL1Q01085 375 aaKnown RBP eCLIP2.91□□□□□ -1.94
RNU4-42P-201ENST00000364738 MFSD13AQ14CX5 517 aa2.91□□□□□ -1.94
RNU4-42P-201ENST00000364738 INSCQ1MX18 579 aa2.91□□□□□ -1.94
RNU4-42P-201ENST00000364738 DAB2IPQ5VWQ8 1189 aa2.91□□□□□ -1.94
RNU4-42P-201ENST00000364738 LVRNQ6Q4G3 990 aa2.91□□□□□ -1.94
RNU4-42P-201ENST00000364738 ZDHHC24Q6UX98 284 aa2.91□□□□□ -1.94
RNU4-42P-201ENST00000364738 ZNF793Q6ZN11 406 aa2.91□□□□□ -1.94
RNU4-42P-201ENST00000364738 KCTD20Q7Z5Y7 419 aa2.91□□□□□ -1.94
RNU4-42P-201ENST00000364738 NGDNQ8NEJ9 315 aaKnown RBP2.91□□□□□ -1.94
RNU4-42P-201ENST00000364738 OR56A3Q8NH54 315 aa2.91□□□□□ -1.94
RNU4-42P-201ENST00000364738 PPP1R35Q8TAP8 253 aa2.91□□□□□ -1.94
RNU4-42P-201ENST00000364738 ZCRB1Q8TBF4 217 aaKnown RBP2.91□□□□□ -1.94
RNU4-42P-201ENST00000364738 SPSB4Q96A44 273 aa2.91□□□□□ -1.94
RNU4-42P-201ENST00000364738 HIC2Q96JB3 615 aa2.91□□□□□ -1.94
RNU4-42P-201ENST00000364738 ZFYVE19Q96K21 471 aa2.91□□□□□ -1.94
RNU4-42P-201ENST00000364738 ZBTB45Q96K62 511 aaPredicted RBP2.91□□□□□ -1.94
RNU4-42P-201ENST00000364738 LRGUKQ96M69 825 aa2.91□□□□□ -1.94
RNU4-42P-201ENST00000364738 TRMOQ9BU70 441 aa2.91□□□□□ -1.94
RNU4-42P-201ENST00000364738 TRIM5Q9C035 493 aa2.91□□□□□ -1.94
RNU4-42P-201ENST00000364738 ZNF518BQ9C0D4 1074 aa2.91□□□□□ -1.94
RNU4-42P-201ENST00000364738 SMURF2Q9HAU4 748 aa2.91□□□□□ -1.94
RNU4-42P-201ENST00000364738 TRIM36Q9NQ86 728 aa2.91□□□□□ -1.94
RNU4-42P-201ENST00000364738 A1CFQ9NQ94 594 aaKnown RBP2.91□□□□□ -1.94
RNU4-42P-201ENST00000364738 DNMT3BQ9UBC3 853 aaKnown RBP2.91□□□□□ -1.94
RNU4-42P-201ENST00000364738 H7C4K7 107 aa2.9□□□□□ -1.95
RNU4-42P-201ENST00000364738 EXOC5O00471 708 aa2.9□□□□□ -1.95
RNU4-42P-201ENST00000364738 SMAD6O43541 496 aaKnown RBP2.9□□□□□ -1.95
RNU4-42P-201ENST00000364738 RRP9O43818 475 aaKnown RBP2.9□□□□□ -1.95
RNU4-42P-201ENST00000364738 MARCH6O60337 910 aa2.9□□□□□ -1.95
RNU4-42P-201ENST00000364738 TACR3P29371 465 aa2.9□□□□□ -1.95
RNU4-42P-201ENST00000364738 SLC7A1P30825 629 aa2.9□□□□□ -1.95
RNU4-42P-201ENST00000364738 PTDSS1P48651 473 aaKnown RBP2.9□□□□□ -1.95
RNU4-42P-201ENST00000364738 PGDP52209 483 aa2.9□□□□□ -1.95
RNU4-42P-201ENST00000364738 ITGA8P53708 1063 aa2.9□□□□□ -1.95
RNU4-42P-201ENST00000364738 SLC14A1Q13336 389 aa2.9□□□□□ -1.95
RNU4-42P-201ENST00000364738 ERV3-1Q14264 604 aa2.9□□□□□ -1.95
RNU4-42P-201ENST00000364738 ANO6Q4KMQ2 910 aa2.9□□□□□ -1.95
RNU4-42P-201ENST00000364738 KRTAP5-11Q6L8G4 156 aa2.9□□□□□ -1.95
RNU4-42P-201ENST00000364738 MPLKIPQ8TAP9 179 aa2.9□□□□□ -1.95
RNU4-42P-201ENST00000364738 MAML1Q92585 1016 aa2.9□□□□□ -1.95
RNU4-42P-201ENST00000364738 THOC3Q96J01 351 aaKnown RBP2.9□□□□□ -1.95
RNU4-42P-201ENST00000364738 ACO2Q99798 780 aaKnown RBP2.9□□□□□ -1.95
RNU4-42P-201ENST00000364738 RHOBTB2Q9BYZ6 727 aa2.9□□□□□ -1.95
RNU4-42P-201ENST00000364738 HIPK2Q9H2X6 1198 aa2.9□□□□□ -1.95
RNU4-42P-201ENST00000364738 XPNPEP3Q9NQH7 507 aa2.9□□□□□ -1.95
RNU4-42P-201ENST00000364738 GAR1Q9NY12 217 aaKnown RBP2.9□□□□□ -1.95
RNU4-42P-201ENST00000364738 PNMA8BQ9ULN7 279 aaPredicted RBP2.9□□□□□ -1.95
RNU4-42P-201ENST00000364738 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.9□□□□□ -1.95
RNU4-42P-201ENST00000364738 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.89□□□□□ -1.95
RNU4-42P-201ENST00000364738 MBD3L4A6NDZ8 208 aaPredicted RBP2.89□□□□□ -1.95
RNU4-42P-201ENST00000364738 MBD3L3A6NE82 208 aaPredicted RBP2.89□□□□□ -1.95
RNU4-42P-201ENST00000364738 TBX3O15119 743 aa2.89□□□□□ -1.95
RNU4-42P-201ENST00000364738 INPPL1O15357 1258 aa2.89□□□□□ -1.95
RNU4-42P-201ENST00000364738 CCP110O43303 1012 aa2.89□□□□□ -1.95
RNU4-42P-201ENST00000364738 RASSF9O75901 435 aa2.89□□□□□ -1.95
RNU4-42P-201ENST00000364738 PIAS2O75928 621 aa2.89□□□□□ -1.95
RNU4-42P-201ENST00000364738 MYBP10242 640 aa2.89□□□□□ -1.95
RNU4-42P-201ENST00000364738 ATF7P17544 494 aaPredicted RBP2.89□□□□□ -1.95
RNU4-42P-201ENST00000364738 KLRC1P26715 233 aa2.89□□□□□ -1.95
RNU4-42P-201ENST00000364738 MCM5P33992 734 aa2.89□□□□□ -1.95
RNU4-42P-201ENST00000364738 CDKN2AP42771 156 aaKnown RBP2.89□□□□□ -1.95
RNU4-42P-201ENST00000364738 CPA2P48052 419 aa2.89□□□□□ -1.95
RNU4-42P-201ENST00000364738 GATMP50440 423 aa2.89□□□□□ -1.95
RNU4-42P-201ENST00000364738 HSF1Q00613 529 aa2.89□□□□□ -1.95
RNU4-42P-201ENST00000364738 CFHR3Q02985 330 aa2.89□□□□□ -1.95
RNU4-42P-201ENST00000364738 STK3Q13188 491 aa2.89□□□□□ -1.95
RNU4-42P-201ENST00000364738 MTX1Q13505 466 aa2.89□□□□□ -1.95
RNU4-42P-201ENST00000364738 PIN1Q13526 163 aaPredicted RBP2.89□□□□□ -1.95
RNU4-42P-201ENST00000364738 STIM1Q13586 685 aa2.89□□□□□ -1.95
RNU4-42P-201ENST00000364738 KPNB1Q14974 876 aaKnown RBP2.89□□□□□ -1.95
RNU4-42P-201ENST00000364738 NPY5RQ15761 445 aa2.89□□□□□ -1.95
RNU4-42P-201ENST00000364738 PFKFB3Q16875 520 aaPredicted RBP2.89□□□□□ -1.95
RNU4-42P-201ENST00000364738 ZNF750Q32MQ0 723 aa2.89□□□□□ -1.95
RNU4-42P-201ENST00000364738 ZNF549Q6P9A3 640 aa2.89□□□□□ -1.95
RNU4-42P-201ENST00000364738 MICU3Q86XE3 530 aa2.89□□□□□ -1.95
RNU4-42P-201ENST00000364738 COL23A1Q86Y22 540 aaPredicted RBP2.89□□□□□ -1.95
RNU4-42P-201ENST00000364738 MMP21Q8N119 569 aa2.89□□□□□ -1.95
RNU4-42P-201ENST00000364738 ZBTB34Q8NCN2 500 aa2.89□□□□□ -1.95
RNU4-42P-201ENST00000364738 IL31RAQ8NI17 732 aa2.89□□□□□ -1.95
RNU4-42P-201ENST00000364738 EDC3Q96F86 508 aaKnown RBP2.89□□□□□ -1.95
RNU4-42P-201ENST00000364738 AIFM3Q96NN9 605 aa2.89□□□□□ -1.95
RNU4-42P-201ENST00000364738 TAAR9Q96RI9 348 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms