RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 APRTP07741 180 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 NFICP08651 508 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 TFE3P19532 575 aaPredicted RBP11.03□□□□□ -0.64
SMC3-201ENST00000361804 PHBP35232 272 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 RASSF2P50749 326 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 ATXN1P54253 815 aaKnown RBP11.03□□□□□ -0.64
SMC3-201ENST00000361804 GRIK3Q13003 919 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 PRKD1Q15139 912 aaPredicted RBP11.03□□□□□ -0.64
SMC3-201ENST00000361804 RASA2Q15283 850 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 CA9Q16790 459 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 SH3D19Q5HYK7 790 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 NOL9Q5SY16 702 aaKnown RBP11.03□□□□□ -0.64
SMC3-201ENST00000361804 FAM102AQ5T9C2 384 aaPredicted RBP11.03□□□□□ -0.64
SMC3-201ENST00000361804 BBS12Q6ZW61 710 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.03□□□□□ -0.64
SMC3-201ENST00000361804 PDCD7Q8N8D1 485 aaKnown RBP11.03□□□□□ -0.64
SMC3-201ENST00000361804 ENDOVQ8N8Q3 282 aaKnown RBP11.03□□□□□ -0.64
SMC3-201ENST00000361804 NSL1Q96IY1 281 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 MINDY3Q9H8M7 445 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 GPRC5DQ9NZD1 345 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 MAFBQ9Y5Q3 323 aaPredicted RBP11.03□□□□□ -0.64
SMC3-201ENST00000361804 IKBKGQ9Y6K9 419 aa11.03□□□□□ -0.64
SMC3-201ENST00000361804 B2RBV5 119 aa11.02□□□□□ -0.64
SMC3-201ENST00000361804 SMAPO00193 183 aa11.02□□□□□ -0.64
SMC3-201ENST00000361804 KCNN4O15554 427 aa11.02□□□□□ -0.64
SMC3-201ENST00000361804 HOXC6P09630 235 aa11.02□□□□□ -0.64
SMC3-201ENST00000361804 IQCF3P0C7M6 154 aa11.02□□□□□ -0.64
SMC3-201ENST00000361804 UBA1P22314 1058 aaKnown RBP11.02□□□□□ -0.64
SMC3-201ENST00000361804 MRPS5P82675 430 aaKnown RBP11.02□□□□□ -0.64
SMC3-201ENST00000361804 MXRA7P84157 204 aa11.02□□□□□ -0.64
SMC3-201ENST00000361804 ZNF200P98182 395 aaPredicted RBP11.02□□□□□ -0.64
SMC3-201ENST00000361804 CDK16Q00536 496 aa11.02□□□□□ -0.64
SMC3-201ENST00000361804 BST1Q10588 318 aa11.02□□□□□ -0.64
SMC3-201ENST00000361804 POU5F2Q8N7G0 328 aa11.02□□□□□ -0.64
SMC3-201ENST00000361804 OXNAD1Q96HP4 312 aaPredicted RBP11.02□□□□□ -0.64
SMC3-201ENST00000361804 USP18Q9UMW8 372 aa11.02□□□□□ -0.64
SMC3-201ENST00000361804 SIGLEC16A6NMB1 481 aa11.02□□□□□ -0.65
SMC3-201ENST00000361804 ADCY3O60266 1144 aa11.02□□□□□ -0.65
SMC3-201ENST00000361804 ZCCHC18P0CG32 403 aa11.02□□□□□ -0.65
SMC3-201ENST00000361804 CSH1P0DML2 217 aa11.02□□□□□ -0.65
SMC3-201ENST00000361804 CSH2P0DML3 217 aa11.02□□□□□ -0.65
SMC3-201ENST00000361804 RBL1P28749 1068 aa11.02□□□□□ -0.65
SMC3-201ENST00000361804 FOXB2Q5VYV0 432 aa11.02□□□□□ -0.65
SMC3-201ENST00000361804 SH2D5Q6ZV89 423 aa11.02□□□□□ -0.65
SMC3-201ENST00000361804 ZNF280CQ8ND82 737 aa11.02□□□□□ -0.65
SMC3-201ENST00000361804 CXorf38Q8TB03 319 aa11.02□□□□□ -0.65
SMC3-201ENST00000361804 PPP1R13LQ8WUF5 828 aa11.02□□□□□ -0.65
SMC3-201ENST00000361804 CEP41Q9BYV8 373 aa11.02□□□□□ -0.65
SMC3-201ENST00000361804 FOXP3Q9BZS1 431 aa11.02□□□□□ -0.65
SMC3-201ENST00000361804 CXCL16Q9H2A7 254 aa11.02□□□□□ -0.65
SMC3-201ENST00000361804 MFHAS1Q9Y4C4 1052 aa11.02□□□□□ -0.65
SMC3-201ENST00000361804 M0QYV0 167 aa11.02□□□□□ -0.65
SMC3-201ENST00000361804 CCDC22O60826 627 aa11.02□□□□□ -0.65
SMC3-201ENST00000361804 ADORA2AP29274 412 aa11.02□□□□□ -0.65
SMC3-201ENST00000361804 TMPRSS15P98073 1019 aa11.02□□□□□ -0.65
SMC3-201ENST00000361804 CHI3L2Q15782 390 aa11.02□□□□□ -0.65
SMC3-201ENST00000361804 MOB2Q70IA6 237 aa11.02□□□□□ -0.65
SMC3-201ENST00000361804 CCNJLQ8IV13 435 aa11.02□□□□□ -0.65
SMC3-201ENST00000361804 RBM15BQ8NDT2 890 aaKnown RBP11.02□□□□□ -0.65
SMC3-201ENST00000361804 TTC1Q99614 292 aa11.02□□□□□ -0.65
SMC3-201ENST00000361804 ELOVL4Q9GZR5 314 aa11.02□□□□□ -0.65
SMC3-201ENST00000361804 MAD1L1Q9Y6D9 718 aa11.02□□□□□ -0.65
SMC3-201ENST00000361804 GJA3Q9Y6H8 435 aa11.02□□□□□ -0.65
SMC3-201ENST00000361804 SZT2Q5T011 3432 aa11.02□□□□□ -0.65
SMC3-201ENST00000361804 INO80B-WBP1J3KQ70 363 aa11.01□□□□□ -0.65
SMC3-201ENST00000361804 MCF2LO15068 1137 aa11.01□□□□□ -0.65
SMC3-201ENST00000361804 PSMG1O95456 288 aa11.01□□□□□ -0.65
SMC3-201ENST00000361804 HMGCRP04035 888 aa11.01□□□□□ -0.65
SMC3-201ENST00000361804 RPS12P25398 132 aaKnown RBP11.01□□□□□ -0.65
SMC3-201ENST00000361804 PGM1P36871 562 aa11.01□□□□□ -0.65
SMC3-201ENST00000361804 RTP1P59025 263 aa11.01□□□□□ -0.65
SMC3-201ENST00000361804 YWHAZP63104 245 aaKnown RBP11.01□□□□□ -0.65
SMC3-201ENST00000361804 VGLL4Q14135 290 aa11.01□□□□□ -0.65
SMC3-201ENST00000361804 DUOXA2Q1HG44 320 aa11.01□□□□□ -0.65
SMC3-201ENST00000361804 PPP6R3Q5H9R7 873 aaPredicted RBP11.01□□□□□ -0.65
SMC3-201ENST00000361804 LRRC38Q5VT99 294 aa11.01□□□□□ -0.65
SMC3-201ENST00000361804 SLFN12LQ6IEE8 588 aa11.01□□□□□ -0.65
SMC3-201ENST00000361804 ATG14Q6ZNE5 492 aa11.01□□□□□ -0.65
SMC3-201ENST00000361804 MOCOSQ96EN8 888 aa11.01□□□□□ -0.65
SMC3-201ENST00000361804 APOPT1Q96IL0 206 aa11.01□□□□□ -0.65
SMC3-201ENST00000361804 INO80BQ9C086 356 aaPredicted RBP11.01□□□□□ -0.65
SMC3-201ENST00000361804 DCLRE1BQ9H816 532 aa11.01□□□□□ -0.65
SMC3-201ENST00000361804 SIX4Q9UIU6 781 aa11.01□□□□□ -0.65
SMC3-201ENST00000361804 PACSIN3Q9UKS6 424 aa11.01□□□□□ -0.65
SMC3-201ENST00000361804 TEX264Q9Y6I9 313 aa11.01□□□□□ -0.65
SMC3-201ENST00000361804 TRAFD1O14545 582 aaPredicted RBP11.01□□□□□ -0.65
SMC3-201ENST00000361804 COPEO14579 308 aa11.01□□□□□ -0.65
SMC3-201ENST00000361804 HCRTO43612 131 aa11.01□□□□□ -0.65
SMC3-201ENST00000361804 CD1EP15812 388 aa11.01□□□□□ -0.65
SMC3-201ENST00000361804 GJA5P36382 358 aa11.01□□□□□ -0.65
SMC3-201ENST00000361804 KLHL38Q2WGJ6 581 aa11.01□□□□□ -0.65
SMC3-201ENST00000361804 WASHC2DQ5SRD0 308 aa11.01□□□□□ -0.65
SMC3-201ENST00000361804 LRRC74BQ6ZQY2 392 aa11.01□□□□□ -0.65
SMC3-201ENST00000361804 CYP4V2Q6ZWL3 525 aaPredicted RBP11.01□□□□□ -0.65
SMC3-201ENST00000361804 HIPK4Q8NE63 616 aa11.01□□□□□ -0.65
SMC3-201ENST00000361804 SLC44A1Q8WWI5 657 aa11.01□□□□□ -0.65
SMC3-201ENST00000361804 THTPAQ9BU02 230 aa11.01□□□□□ -0.65
SMC3-201ENST00000361804 KRT82Q9NSB4 513 aa11.01□□□□□ -0.65
SMC3-201ENST00000361804 DDX56Q9NY93 547 aaKnown RBP11.01□□□□□ -0.65
SMC3-201ENST00000361804 SCN1AP35498 2009 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms