RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 CYP2F1P24903 491 aa19.21■□□□□ 0.67
CLIP2-202ENST00000361545 AP2B1P63010 937 aa19.21■□□□□ 0.67
CLIP2-202ENST00000361545 MAP2K5Q13163 448 aa19.21■□□□□ 0.67
CLIP2-202ENST00000361545 MAP4K3Q8IVH8 894 aa19.21■□□□□ 0.67
CLIP2-202ENST00000361545 EMILIN2Q9BXX0 1053 aa19.21■□□□□ 0.67
CLIP2-202ENST00000361545 CDY2AQ9Y6F7 541 aa19.21■□□□□ 0.67
CLIP2-202ENST00000361545 MROH7Q68CQ1 1323 aa19.21■□□□□ 0.67
CLIP2-202ENST00000361545 MROH1Q8NDA8 1641 aa19.21■□□□□ 0.67
CLIP2-202ENST00000361545 MEIS2O14770 477 aa19.21■□□□□ 0.67
CLIP2-202ENST00000361545 CCDC130P13994 396 aa19.21■□□□□ 0.67
CLIP2-202ENST00000361545 YWHAQP27348 245 aa19.21■□□□□ 0.67
CLIP2-202ENST00000361545 PGM1P36871 562 aa19.21■□□□□ 0.67
CLIP2-202ENST00000361545 UNC45BQ8IWX7 931 aa19.21■□□□□ 0.67
CLIP2-202ENST00000361545 REXO1L1PQ8IX06 675 aa19.21■□□□□ 0.67
CLIP2-202ENST00000361545 KIAA0319LQ8IZA0 1049 aa19.21■□□□□ 0.67
CLIP2-202ENST00000361545 TRIM4Q9C037 500 aa19.21■□□□□ 0.67
CLIP2-202ENST00000361545 ARL2BPQ9Y2Y0 163 aa19.21■□□□□ 0.67
CLIP2-202ENST00000361545 RIC1Q4ADV7 1423 aa19.21■□□□□ 0.67
CLIP2-202ENST00000361545 CLASP2O75122 1294 aaKnown RBP19.21■□□□□ 0.67
CLIP2-202ENST00000361545 DNAJC8O75937 253 aaPredicted RBP19.21■□□□□ 0.67
CLIP2-202ENST00000361545 SMIM10L2AP0DMW4 78 aa19.21■□□□□ 0.67
CLIP2-202ENST00000361545 SMIM10L2BP0DMW5 78 aa19.21■□□□□ 0.67
CLIP2-202ENST00000361545 BDNFP23560 247 aa19.21■□□□□ 0.67
CLIP2-202ENST00000361545 PLA2G4AP47712 749 aa19.21■□□□□ 0.67
CLIP2-202ENST00000361545 HIC1Q14526 733 aa19.21■□□□□ 0.67
CLIP2-202ENST00000361545 KRT72Q14CN4 511 aa19.21■□□□□ 0.67
CLIP2-202ENST00000361545 ZNF284Q2VY69 593 aa19.21■□□□□ 0.67
CLIP2-202ENST00000361545 OTUB1Q96FW1 271 aaPredicted RBP19.21■□□□□ 0.67
CLIP2-202ENST00000361545 NAF1Q96HR8 494 aaKnown RBP19.21■□□□□ 0.67
CLIP2-202ENST00000361545 SFMBT1Q9UHJ3 866 aa19.21■□□□□ 0.67
CLIP2-202ENST00000361545 NUDT5Q9UKK9 219 aa19.21■□□□□ 0.67
CLIP2-202ENST00000361545 CHUKO15111 745 aa19.2■□□□□ 0.66
CLIP2-202ENST00000361545 EEF1DP29692 281 aaKnown RBP19.2■□□□□ 0.66
CLIP2-202ENST00000361545 KPNA1P52294 538 aaPredicted RBP19.2■□□□□ 0.66
CLIP2-202ENST00000361545 YWHAZP63104 245 aaKnown RBP19.2■□□□□ 0.66
CLIP2-202ENST00000361545 CHI3L2Q15782 390 aa19.2■□□□□ 0.66
CLIP2-202ENST00000361545 TREML2Q5T2D2 321 aa19.2■□□□□ 0.66
CLIP2-202ENST00000361545 SLC35C1Q96A29 364 aa19.2■□□□□ 0.66
CLIP2-202ENST00000361545 PNKPQ96T60 521 aa19.2■□□□□ 0.66
CLIP2-202ENST00000361545 DMAP1Q9NPF5 467 aaPredicted RBP19.2■□□□□ 0.66
CLIP2-202ENST00000361545 STOML1Q9UBI4 398 aa19.2■□□□□ 0.66
CLIP2-202ENST00000361545 CDYLQ9Y232 598 aa19.2■□□□□ 0.66
CLIP2-202ENST00000361545 SDR42E2A6NKP2 422 aa19.2■□□□□ 0.66
CLIP2-202ENST00000361545 SOAT2O75908 522 aa19.2■□□□□ 0.66
CLIP2-202ENST00000361545 NOGQ13253 232 aa19.2■□□□□ 0.66
CLIP2-202ENST00000361545 NR1H4Q96RI1 486 aaPredicted RBP19.2■□□□□ 0.66
CLIP2-202ENST00000361545 IARS2Q9NSE4 1012 aaKnown RBP19.2■□□□□ 0.66
CLIP2-202ENST00000361545 CAMTA1Q9Y6Y1 1673 aa19.2■□□□□ 0.66
CLIP2-202ENST00000361545 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.2■□□□□ 0.66
CLIP2-202ENST00000361545 IL10P22301 178 aa19.2■□□□□ 0.66
CLIP2-202ENST00000361545 ATXN3P54252 364 aaPredicted RBP19.2■□□□□ 0.66
CLIP2-202ENST00000361545 UGT3A1Q6NUS8 523 aa19.2■□□□□ 0.66
CLIP2-202ENST00000361545 PALB2Q86YC2 1186 aa19.2■□□□□ 0.66
CLIP2-202ENST00000361545 MCOLN2Q8IZK6 566 aa19.2■□□□□ 0.66
CLIP2-202ENST00000361545 TBC1D12O60347 775 aa19.2■□□□□ 0.66
CLIP2-202ENST00000361545 PRKAR2AP13861 404 aaKnown RBP19.2■□□□□ 0.66
CLIP2-202ENST00000361545 IGFBP4P22692 258 aa19.2■□□□□ 0.66
CLIP2-202ENST00000361545 IL31RAQ8NI17 732 aa19.2■□□□□ 0.66
CLIP2-202ENST00000361545 MTMR9Q96QG7 549 aa19.2■□□□□ 0.66
CLIP2-202ENST00000361545 MRPL1Q9BYD6 325 aaKnown RBP19.2■□□□□ 0.66
CLIP2-202ENST00000361545 PDGFCQ9NRA1 345 aa19.2■□□□□ 0.66
CLIP2-202ENST00000361545 RBM22Q9NW64 420 aaKnown RBP eCLIP19.2■□□□□ 0.662e-6■■■□□ 17.9
CLIP2-202ENST00000361545 CHCHD3Q9NX63 227 aaKnown RBP19.2■□□□□ 0.66
CLIP2-202ENST00000361545 ATP6V1E1P36543 226 aa19.19■□□□□ 0.66
CLIP2-202ENST00000361545 BTKQ06187 659 aa19.19■□□□□ 0.66
CLIP2-202ENST00000361545 LRRC6Q86X45 466 aa19.19■□□□□ 0.66
CLIP2-202ENST00000361545 CEP19Q96LK0 163 aa19.19■□□□□ 0.66
CLIP2-202ENST00000361545 WDR18Q9BV38 432 aa19.19■□□□□ 0.66
CLIP2-202ENST00000361545 ROPN1BQ9BZX4 212 aaPredicted RBP19.19■□□□□ 0.66
CLIP2-202ENST00000361545 ROPN1Q9HAT0 212 aaPredicted RBP19.19■□□□□ 0.66
CLIP2-202ENST00000361545 KDM1AO60341 852 aa19.19■□□□□ 0.66
CLIP2-202ENST00000361545 ERMARDQ5T6L9 678 aa19.19■□□□□ 0.66
CLIP2-202ENST00000361545 ILDR1Q86SU0 546 aaPredicted RBP19.19■□□□□ 0.66
CLIP2-202ENST00000361545 CACUL1Q86Y37 369 aa19.19■□□□□ 0.66
CLIP2-202ENST00000361545 E2F7Q96AV8 911 aa19.19■□□□□ 0.66
CLIP2-202ENST00000361545 PSD3Q9NYI0 1048 aa19.19■□□□□ 0.66
CLIP2-202ENST00000361545 SUFUQ9UMX1 484 aa19.19■□□□□ 0.66
CLIP2-202ENST00000361545 MSCO60682 206 aa19.19■□□□□ 0.66
CLIP2-202ENST00000361545 CABYRO75952 493 aa19.19■□□□□ 0.66
CLIP2-202ENST00000361545 PCDH8O95206 1070 aa19.19■□□□□ 0.66
CLIP2-202ENST00000361545 PPM1LQ5SGD2 360 aa19.19■□□□□ 0.66
CLIP2-202ENST00000361545 CASKIN2Q8WXE0 1202 aa19.19■□□□□ 0.66
CLIP2-202ENST00000361545 ERLEC1Q96DZ1 483 aa19.19■□□□□ 0.66
CLIP2-202ENST00000361545 SPASTQ9UBP0 616 aa19.19■□□□□ 0.66
CLIP2-202ENST00000361545 MAP3K13O43283 966 aa19.19■□□□□ 0.66
CLIP2-202ENST00000361545 PSMD10O75832 226 aa19.19■□□□□ 0.66
CLIP2-202ENST00000361545 TRIM16O95361 564 aa19.19■□□□□ 0.66
CLIP2-202ENST00000361545 OR1E1P30953 314 aa19.19■□□□□ 0.66
CLIP2-202ENST00000361545 C1QBPQ07021 282 aaKnown RBP19.19■□□□□ 0.66
CLIP2-202ENST00000361545 EXD1Q8NHP7 514 aa19.19■□□□□ 0.66
CLIP2-202ENST00000361545 SENP8Q96LD8 212 aa19.19■□□□□ 0.66
CLIP2-202ENST00000361545 FRMD8P1Q9BZ68 369 aaPredicted RBP19.19■□□□□ 0.66
CLIP2-202ENST00000361545 IL1RL2Q9HB29 575 aa19.19■□□□□ 0.66
CLIP2-202ENST00000361545 CAPN10Q9HC96 672 aa19.19■□□□□ 0.66
CLIP2-202ENST00000361545 TEKT2Q9UIF3 430 aa19.19■□□□□ 0.66
CLIP2-202ENST00000361545 AIM2O14862 343 aa19.18■□□□□ 0.66
CLIP2-202ENST00000361545 HIST2H2ACQ16777 129 aaPredicted RBP19.18■□□□□ 0.66
CLIP2-202ENST00000361545 AARS2Q5JTZ9 985 aaKnown RBP19.18■□□□□ 0.66
CLIP2-202ENST00000361545 HIST2H2AA3Q6FI13 130 aa19.18■□□□□ 0.66
CLIP2-202ENST00000361545 SUPT7LO94864 414 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms