RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 NSMCE2Q96MF7 247 aa13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 C9orf16Q9BUW7 83 aa13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 NCKIPSDQ9NZQ3 722 aa13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 ATXN10Q9UBB4 475 aa13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 POLRMTO00411 1230 aaKnown RBP13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 CBFA2T3O75081 653 aa13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 ITGA4P13612 1032 aa13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 USP39Q53GS9 565 aaKnown RBP13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 ZNF554Q86TJ5 538 aa13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 ZSCAN18Q8TBC5 510 aaPredicted RBP13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 TATDN2Q93075 761 aa13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 OSGEPQ9NPF4 335 aa13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 ARHGAP20Q9P2F6 1191 aa13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 MYL3P08590 195 aa13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 PSMA3P25788 255 aa13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 CENPAP49450 140 aa13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 TFDP3Q5H9I0 405 aa13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 CYP2R1Q6VVX0 501 aa13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 CHMP1BQ7LBR1 199 aa13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 SETD9Q8NE22 299 aa13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 PGM2Q96G03 612 aa13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 DUSP12Q9UNI6 340 aa13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 NCOA3Q9Y6Q9 1424 aa13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 A0A0A6YYK5 440 aaPredicted RBP13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 IL6P05231 212 aa13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 MAGEA10P43363 369 aaPredicted RBP13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 PDK3Q15120 406 aa13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 CCDC153Q494R4 210 aa13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 EID3Q8N140 333 aa13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 ZNF75CPQ92670 426 aaPredicted RBP13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 APBB2Q92870 758 aa13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 FHDC1Q9C0D6 1143 aaPredicted RBP13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 GDF3Q9NR23 364 aa13.83□□□□□ -0.2
CCDC144A-203ENST00000360495 TTC37Q6PGP7 1564 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 ZNF335Q9H4Z2 1342 aaPredicted RBP13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 FOXN3O00409 490 aaPredicted RBP13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 DGAT1O75907 488 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 SGPL1O95470 568 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 RPL5P46777 297 aaKnown RBP13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 ANTXR2P58335 489 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 BOLA3Q53S33 107 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 STK32CQ86UX6 486 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 KRT78Q8N1N4 520 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 CDRT15Q96T59 188 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 TMEM121Q9BTD3 319 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 NEO1Q92859 1461 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 HS6ST1O60243 411 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 RAD17O75943 681 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 SERPINE1P05121 402 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 KCNJ2P63252 427 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 ZRANB3Q5FWF4 1079 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 NEK10Q6ZWH5 1172 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 STRA8Q7Z7C7 330 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 EXOC3L1Q86VI1 746 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 ERO1BQ86YB8 467 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 TSPAN14Q8NG11 270 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 UBA3Q8TBC4 463 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 PPP1R10Q96QC0 940 aaKnown RBP13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 NRDE2Q9H7Z3 1164 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 ENTPD7Q9NQZ7 604 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 CLCA2Q9UQC9 943 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 TBX3O15119 743 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 ATP6V1C1P21283 382 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 NRF1Q16656 503 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 ATG14Q6ZNE5 492 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 IKBIPQ70UQ0 350 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 KRT73Q86Y46 540 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 SYNE4Q8N205 404 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 LRRC71Q8N4P6 559 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 KLHL23Q8NBE8 558 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 FAM120BQ96EK7 910 aaKnown RBP13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 PROCP04070 461 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 CRKP46108 304 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 ALDH1A3P47895 512 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 NR1H2P55055 460 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 MRPS22P82650 360 aaKnown RBP13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 CCNG2Q16589 344 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 RBM44Q6ZP01 1051 aaKnown RBP13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 SLC7A14Q8TBB6 771 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 FIG4Q92562 907 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 UBXN6Q9BZV1 441 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 THAP1Q9NVV9 213 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 EHD3Q9NZN3 535 aa13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 NFKBIL1Q9UBC1 381 aaPredicted RBP13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 TRMT6Q9UJA5 497 aaKnown RBP13.82□□□□□ -0.2
CCDC144A-203ENST00000360495 FLT1P17948 1338 aa13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 PRR23AA6NEV1 266 aa13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 RPS6KA5O75582 802 aa13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 UNC5CO95185 931 aa13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 CDH3P22223 829 aa13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 NLGN1Q8N2Q7 840 aa13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 GIPC3Q8TF64 312 aa13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 CENPTQ96BT3 561 aa13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 APOPT1Q96IL0 206 aa13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 NCF1BA6NI72 391 aaPredicted RBP13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 NCF1CA8MVU1 366 aaPredicted RBP13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 ANXA9O76027 345 aa13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 NCF1P14598 390 aaPredicted RBP13.81□□□□□ -0.2
CCDC144A-203ENST00000360495 ETS2P15036 469 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms