RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 SCARA3Q6AZY7 606 aa9.69□□□□□ -0.86
GTF3C2-202ENST00000359541 ADGRD1Q6QNK2 874 aa9.69□□□□□ -0.86
GTF3C2-202ENST00000359541 LINC01465Q8N7H1 131 aa9.69□□□□□ -0.86
GTF3C2-202ENST00000359541 USP6NLQ92738 828 aa9.69□□□□□ -0.86
GTF3C2-202ENST00000359541 LRRC39Q96DD0 335 aa9.69□□□□□ -0.86
GTF3C2-202ENST00000359541 GBA2Q9HCG7 927 aaPredicted RBP9.69□□□□□ -0.86
GTF3C2-202ENST00000359541 EURLQ9NYK6 297 aa9.69□□□□□ -0.86
GTF3C2-202ENST00000359541 MDM4O15151 490 aa9.69□□□□□ -0.86
GTF3C2-202ENST00000359541 MMP3P08254 477 aa9.69□□□□□ -0.86
GTF3C2-202ENST00000359541 ZC3H12AQ5D1E8 599 aaKnown RBP9.69□□□□□ -0.86
GTF3C2-202ENST00000359541 RNF217Q8TC41 542 aa9.69□□□□□ -0.86
GTF3C2-202ENST00000359541 SNTG2Q9NY99 539 aa9.69□□□□□ -0.86
GTF3C2-202ENST00000359541 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.69□□□□□ -0.86
GTF3C2-202ENST00000359541 RABGEF1Q9UJ41 708 aa9.69□□□□□ -0.86
GTF3C2-202ENST00000359541 I3L4J1 428 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 HNRNPCL1O60812 293 aaKnown RBP9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 HUS1O60921 280 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 KRT38O76015 456 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 NQO1P15559 274 aaKnown RBP9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 NR2C2P49116 596 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 C15orf59Q2T9L4 293 aaPredicted RBP9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 SV2CQ496J9 727 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 HACE1Q8IYU2 909 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 ARFGAP1Q8N6T3 406 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 CFAP36Q96G28 342 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 TACO1Q9BSH4 297 aaKnown RBP9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 TUBB6Q9BUF5 446 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 APOL6Q9BWW8 343 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 DHX35Q9H5Z1 703 aaKnown RBP9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 CYLDQ9NQC7 956 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 NRCAMQ92823 1304 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 ZNF487B1APH4 448 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 CYP2C9P11712 490 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 ALADP13716 330 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 CA8P35219 290 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 RPA3P35244 121 aaPredicted RBP9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 SCNN1AP37088 669 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 ELK3P41970 407 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 PSEN1P49768 467 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 MPP2Q14168 576 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 EFHC1Q5JVL4 640 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 FBXO47Q5MNV8 452 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 SWT1Q5T5J6 900 aaKnown RBP9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 ANKRD22Q5VYY1 191 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 HEATR6Q6AI08 1181 aaKnown RBP9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 PLEKHH3Q7Z736 793 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 SNX27Q96L92 541 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 C16orf70Q9BSU1 422 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 TRIM55Q9BYV6 548 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 ZC3H7BQ9UGR2 993 aaKnown RBP9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 CLUHO75153 1309 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 COPEO14579 308 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 WDR4P57081 412 aaKnown RBP9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 ZBTB16Q05516 673 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 MMRN1Q13201 1228 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 FNBP1LQ5T0N5 605 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 PPP1R26Q5T8A7 1209 aaPredicted RBP9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 TTC39BQ5VTQ0 682 aaPredicted RBP9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 MAP1SQ66K74 1059 aaPredicted RBP9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 ARHGAP17Q68EM7 881 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 APPL2Q8NEU8 664 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 ZNF398Q8TD17 642 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 MAGEC3Q8TD91 643 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 SLC4A5Q9BY07 1137 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 VPS11Q9H270 941 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 C10orf88Q9H8K7 445 aa9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 XAB2Q9HCS7 855 aaKnown RBP9.68□□□□□ -0.86
GTF3C2-202ENST00000359541 PTPRFP10586 1907 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 BCLAF3A2AJT9 711 aaKnown RBP9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 HGSO14964 777 aaPredicted RBP9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 APRTP07741 180 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 GNL1P36915 607 aaPredicted RBP9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 PTPN9P43378 593 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 TAF6P49848 677 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 ELF3P78545 371 aaPredicted RBP9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 BNIP1Q12981 228 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 PDZD4Q76G19 769 aaPredicted RBP9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 TMEM110Q86TL2 294 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 SLC26A11Q86WA9 606 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 LRRC6Q86X45 466 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 CDKL2Q92772 493 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 TINF2Q9BSI4 451 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 SNRNP25Q9BV90 132 aaKnown RBP9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 R3HDMLQ9H3Y0 253 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 PCDH18Q9HCL0 1135 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 SETD4Q9NVD3 440 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 GGT7Q9UJ14 662 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 STAP1Q9ULZ2 295 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 PIN4Q9Y237 131 aaKnown RBP9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 MAD1L1Q9Y6D9 718 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 FOXO6A8MYZ6 492 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 KBTBD13C9JR72 458 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 TRDMT1O14717 391 aaKnown RBP9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 EDF1O60869 148 aaKnown RBP9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 TMEM63AO94886 807 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 ADORA2BP29275 332 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 GPX6P59796 221 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 TAF5Q15542 800 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 CCDC14Q49A88 953 aa9.67□□□□□ -0.86
GTF3C2-202ENST00000359541 LDLRAD1Q5T700 205 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms