RNA–Protein interactions for RNA: ENST00000359175.8

SPTSSB-201, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSB, Length 3,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-201ENST00000359175 KAT5Q92993 513 aa13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 CCDC127Q96BQ5 260 aa13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 WDR83Q9BRX9 315 aaKnown RBP13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 TRIM56Q9BRZ2 755 aaKnown RBP13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 ZNF395Q9H8N7 513 aaPredicted RBP13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 SNCAIPQ9Y6H5 919 aa13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 H0YJX3 145 aa13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 GRIN3BO60391 1043 aa13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 STAMBPO95630 424 aa13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 FAAP100Q0VG06 881 aa13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 MSS51Q4VC12 460 aa13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 FNBP1LQ5T0N5 605 aa13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 C14orf80Q86SX3 495 aa13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 PALM2Q8IXS6 379 aa13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 RNF169Q8NCN4 708 aa13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 FBXO36Q8NEA4 188 aa13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 SLC44A1Q8WWI5 657 aa13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 C12orf43Q96C57 262 aaKnown RBP13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 THAP11Q96EK4 314 aa13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 ZNF512Q96ME7 567 aaPredicted RBP13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 DKK3Q9UBP4 350 aa13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 PSMD12O00232 456 aaPredicted RBP13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 MCF2LO15068 1137 aa13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 SIN3BO75182 1162 aa13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 PROSCO94903 275 aa13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 KPNA1P52294 538 aaPredicted RBP13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 FAM209AQ5JX71 171 aa13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 SLC44A5Q8NCS7 719 aa13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 HM13Q8TCT9 377 aa13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 FAM84BQ96KN1 310 aaPredicted RBP13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 UIMC1Q96RL1 719 aa13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 GCOM2Q9BZD3 368 aaPredicted RBP13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 C20orf27Q9GZN8 174 aa13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 TMEM117Q9H0C3 514 aa13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 MRPL46Q9H2W6 279 aaKnown RBP13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 PCDH9Q9HC56 1237 aa13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 VTA1Q9NP79 307 aa13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 MYRFQ9Y2G1 1151 aa13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 IKBKGQ9Y6K9 419 aa13.79□□□□□ -0.2
SPTSSB-201ENST00000359175 CYP3A7-CYP3A51PA0A087WV96 503 aa13.78□□□□□ -0.2
SPTSSB-201ENST00000359175 USP17L5A8MUK1 530 aa13.78□□□□□ -0.2
SPTSSB-201ENST00000359175 GOLGA8SH3BPF8 625 aa13.78□□□□□ -0.2
SPTSSB-201ENST00000359175 GOLGA8MH3BSY2 632 aa13.78□□□□□ -0.2
SPTSSB-201ENST00000359175 XPO1O14980 1071 aaKnown RBP13.78□□□□□ -0.2
SPTSSB-201ENST00000359175 CYP3A7P24462 503 aa13.78□□□□□ -0.2
SPTSSB-201ENST00000359175 GSSP48637 474 aa13.78□□□□□ -0.2
SPTSSB-201ENST00000359175 STAT2P52630 851 aa13.78□□□□□ -0.2
SPTSSB-201ENST00000359175 YWHAGP61981 247 aaKnown RBP eCLIP13.78□□□□□ -0.2
SPTSSB-201ENST00000359175 ATP1A4Q13733 1029 aa13.78□□□□□ -0.2
SPTSSB-201ENST00000359175 ZBED5Q49AG3 693 aa13.78□□□□□ -0.2
SPTSSB-201ENST00000359175 VASH1Q7L8A9 365 aaPredicted RBP13.78□□□□□ -0.2
SPTSSB-201ENST00000359175 GPR141Q7Z602 305 aa13.78□□□□□ -0.2
SPTSSB-201ENST00000359175 NUDCD3Q8IVD9 361 aa13.78□□□□□ -0.2
SPTSSB-201ENST00000359175 GSDMBQ8TAX9 411 aa13.78□□□□□ -0.2
SPTSSB-201ENST00000359175 SHC3Q92529 594 aa13.78□□□□□ -0.2
SPTSSB-201ENST00000359175 BHMTQ93088 406 aa13.78□□□□□ -0.2
SPTSSB-201ENST00000359175 MBOAT7Q96N66 472 aa13.78□□□□□ -0.2
SPTSSB-201ENST00000359175 OLFM1Q99784 485 aa13.78□□□□□ -0.2
SPTSSB-201ENST00000359175 STK39Q9UEW8 545 aa13.78□□□□□ -0.2
SPTSSB-201ENST00000359175 APOBEC2Q9Y235 224 aaKnown RBP13.78□□□□□ -0.2
SPTSSB-201ENST00000359175 ATF5Q9Y2D1 282 aaPredicted RBP13.78□□□□□ -0.2
SPTSSB-201ENST00000359175 SFI1A8K8P3 1242 aa13.78□□□□□ -0.2
SPTSSB-201ENST00000359175 FOXD2O60548 495 aaPredicted RBP13.78□□□□□ -0.2
SPTSSB-201ENST00000359175 MOGQ16653 247 aa13.78□□□□□ -0.2
SPTSSB-201ENST00000359175 CLVS1Q8IUQ0 354 aaPredicted RBP13.78□□□□□ -0.2
SPTSSB-201ENST00000359175 WDR75Q8IWA0 830 aaKnown RBP13.78□□□□□ -0.2
SPTSSB-201ENST00000359175 PCYOX1LQ8NBM8 494 aa13.78□□□□□ -0.2
SPTSSB-201ENST00000359175 CABLES1Q8TDN4 633 aa13.78□□□□□ -0.2
SPTSSB-201ENST00000359175 DDX1Q92499 740 aaKnown RBP13.78□□□□□ -0.2
SPTSSB-201ENST00000359175 KREMEN1Q96MU8 473 aa13.78□□□□□ -0.2
SPTSSB-201ENST00000359175 CTRCQ99895 268 aa13.78□□□□□ -0.2
SPTSSB-201ENST00000359175 TDRD1Q9BXT4 1180 aaKnown RBP13.78□□□□□ -0.2
SPTSSB-201ENST00000359175 PARVBQ9HBI1 364 aa13.78□□□□□ -0.2
SPTSSB-201ENST00000359175 GID8Q9NWU2 228 aa13.78□□□□□ -0.2
SPTSSB-201ENST00000359175 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.78□□□□□ -0.2
SPTSSB-201ENST00000359175 B3GNT3Q9Y2A9 372 aa13.78□□□□□ -0.2
SPTSSB-201ENST00000359175 ZNF536O15090 1300 aa13.78□□□□□ -0.2
SPTSSB-201ENST00000359175 DLG4P78352 724 aa13.77□□□□□ -0.2
SPTSSB-201ENST00000359175 KCNJ8Q15842 424 aa13.77□□□□□ -0.2
SPTSSB-201ENST00000359175 RGS21Q2M5E4 152 aa13.77□□□□□ -0.2
SPTSSB-201ENST00000359175 EGFLAMQ63HQ2 1017 aa13.77□□□□□ -0.2
SPTSSB-201ENST00000359175 MIER3Q7Z3K6 550 aa13.77□□□□□ -0.2
SPTSSB-201ENST00000359175 RHPN2Q8IUC4 686 aa13.77□□□□□ -0.2
SPTSSB-201ENST00000359175 PPIL6Q8IXY8 311 aa13.77□□□□□ -0.2
SPTSSB-201ENST00000359175 LILRA2Q8N149 483 aa13.77□□□□□ -0.2
SPTSSB-201ENST00000359175 MYCT1Q8N699 235 aa13.77□□□□□ -0.2
SPTSSB-201ENST00000359175 NEDD1Q8NHV4 660 aa13.77□□□□□ -0.2
SPTSSB-201ENST00000359175 TFB1MQ8WVM0 346 aaKnown RBP13.77□□□□□ -0.2
SPTSSB-201ENST00000359175 KBTBD7Q8WVZ9 684 aa13.77□□□□□ -0.2
SPTSSB-201ENST00000359175 DCUN1D5Q9BTE7 237 aa13.77□□□□□ -0.2
SPTSSB-201ENST00000359175 ZNF341Q9BYN7 854 aa13.77□□□□□ -0.2
SPTSSB-201ENST00000359175 THAP1Q9NVV9 213 aa13.77□□□□□ -0.2
SPTSSB-201ENST00000359175 COL24A1Q17RW2 1714 aa13.77□□□□□ -0.2
SPTSSB-201ENST00000359175 TMEM114B3SHH9 223 aa13.77□□□□□ -0.21
SPTSSB-201ENST00000359175 PFDN6O15212 129 aa13.77□□□□□ -0.21
SPTSSB-201ENST00000359175 MGEA5O60502 916 aa13.77□□□□□ -0.21
SPTSSB-201ENST00000359175 UGT1A9O60656 530 aa13.77□□□□□ -0.21
SPTSSB-201ENST00000359175 FAM13AO94988 1023 aa13.77□□□□□ -0.21
SPTSSB-201ENST00000359175 MYL4P12829 197 aa13.77□□□□□ -0.21
SPTSSB-201ENST00000359175 ADRA2BP18089 450 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms