RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 CYP4V2Q6ZWL3 525 aaPredicted RBP13.22□□□□□ -0.29
GGPS1-202ENST00000358966 PIGZQ86VD9 579 aa13.22□□□□□ -0.29
GGPS1-202ENST00000358966 CCDC25Q86WR0 208 aa13.22□□□□□ -0.29
GGPS1-202ENST00000358966 ZNF280BQ86YH2 543 aa13.22□□□□□ -0.29
GGPS1-202ENST00000358966 CCDC13Q8IYE1 715 aa13.22□□□□□ -0.29
GGPS1-202ENST00000358966 STKLD1Q8NE28 680 aa13.22□□□□□ -0.29
GGPS1-202ENST00000358966 UBLCP1Q8WVY7 318 aaPredicted RBP13.22□□□□□ -0.29
GGPS1-202ENST00000358966 ARL8AQ96BM9 186 aa13.22□□□□□ -0.29
GGPS1-202ENST00000358966 PLVAPQ9BX97 442 aa13.22□□□□□ -0.29
GGPS1-202ENST00000358966 CAPS2Q9BXY5 557 aa13.22□□□□□ -0.29
GGPS1-202ENST00000358966 LRRC19Q9H756 370 aa13.22□□□□□ -0.29
GGPS1-202ENST00000358966 BATF3Q9NR55 127 aa13.22□□□□□ -0.29
GGPS1-202ENST00000358966 TMPRSS4Q9NRS4 437 aa13.22□□□□□ -0.29
GGPS1-202ENST00000358966 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.22□□□□□ -0.29
GGPS1-202ENST00000358966 ASIC3Q9UHC3 531 aa13.22□□□□□ -0.29
GGPS1-202ENST00000358966 hCG_1818297A0A087WSY0 165 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 FKTNO75072 461 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 GPD1P21695 349 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 HSD17B3P37058 310 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 PNPLA4P41247 253 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 GATMP50440 423 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 MAP3K7CLP57077 242 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 GNGT1P63211 74 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 MTM1Q13496 603 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 CUL1Q13616 776 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 DHX34Q14147 1143 aaKnown RBP13.21□□□□□ -0.29
GGPS1-202ENST00000358966 DSC3Q14574 896 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 CA9Q16790 459 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 UPP1Q16831 310 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 PPP1R2P3Q6NXS1 205 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 GPRIN1Q7Z2K8 1008 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 UNC93AQ86WB7 457 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 SH2D3CQ8N5H7 860 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 NIPA2Q8N8Q9 360 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 NETO2Q8NC67 525 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 SEC14L1Q92503 715 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 TSPAN18Q96SJ8 248 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 FMO2Q99518 471 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 RAB17Q9H0T7 212 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 CHD7Q9P2D1 2997 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 PTPN1P18031 435 aaKnown RBP13.21□□□□□ -0.29
GGPS1-202ENST00000358966 SETDB1Q15047 1291 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 ACCSLQ4AC99 568 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 RNF187Q5TA31 235 aaPredicted RBP13.21□□□□□ -0.29
GGPS1-202ENST00000358966 NPNTQ6UXI9 565 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 RBM12BQ8IXT5 1001 aaKnown RBP13.21□□□□□ -0.29
GGPS1-202ENST00000358966 CRYBG2Q8N1P7 616 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 ANKRD52Q8NB46 1076 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 PXYLP1Q8TE99 480 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 FAM172AQ8WUF8 416 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 FAM149B1Q96BN6 582 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 DEFB118Q96PH6 123 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 TMEM121Q9BTD3 319 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 MED10Q9BTT4 135 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 YIPF2Q9BWQ6 316 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 SLC4A5Q9BY07 1137 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 CHST12Q9NRB3 414 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 KRT82Q9NSB4 513 aa13.21□□□□□ -0.29
GGPS1-202ENST00000358966 NDUFAB1O14561 156 aa13.2□□□□□ -0.3
GGPS1-202ENST00000358966 HSPA6P17066 643 aa13.2□□□□□ -0.3
GGPS1-202ENST00000358966 ZNF143P52747 638 aaPredicted RBP13.2□□□□□ -0.3
GGPS1-202ENST00000358966 BCAT1P54687 386 aa13.2□□□□□ -0.3
GGPS1-202ENST00000358966 BST2Q10589 180 aaKnown RBP13.2□□□□□ -0.3
GGPS1-202ENST00000358966 SLC30A9Q6PML9 568 aa13.2□□□□□ -0.3
GGPS1-202ENST00000358966 TMC3Q7Z5M5 1100 aa13.2□□□□□ -0.3
GGPS1-202ENST00000358966 RUBCNQ92622 972 aa13.2□□□□□ -0.3
GGPS1-202ENST00000358966 PCED1BQ96HM7 432 aa13.2□□□□□ -0.3
GGPS1-202ENST00000358966 WDR35Q9P2L0 1181 aa13.2□□□□□ -0.3
GGPS1-202ENST00000358966 PLAAQ9Y263 795 aa13.2□□□□□ -0.3
GGPS1-202ENST00000358966 ZNF638Q14966 1978 aaKnown RBP13.2□□□□□ -0.3
GGPS1-202ENST00000358966 FRMPD3Q5JV73 1810 aa13.2□□□□□ -0.3
GGPS1-202ENST00000358966 CST8O60676 142 aa13.2□□□□□ -0.3
GGPS1-202ENST00000358966 PQBP1O60828 265 aaKnown RBP13.2□□□□□ -0.3
GGPS1-202ENST00000358966 RNF8O76064 485 aa13.2□□□□□ -0.3
GGPS1-202ENST00000358966 PBX3P40426 434 aa13.2□□□□□ -0.3
GGPS1-202ENST00000358966 SLC6A3Q01959 620 aa13.2□□□□□ -0.3
GGPS1-202ENST00000358966 TAP1Q03518 808 aa13.2□□□□□ -0.3
GGPS1-202ENST00000358966 TFDP3Q5H9I0 405 aa13.2□□□□□ -0.3
GGPS1-202ENST00000358966 HFE2Q6ZVN8 426 aa13.2□□□□□ -0.3
GGPS1-202ENST00000358966 LIMS2Q7Z4I7 341 aa13.2□□□□□ -0.3
GGPS1-202ENST00000358966 TMEM110Q86TL2 294 aa13.2□□□□□ -0.3
GGPS1-202ENST00000358966 ECHDC2Q86YB7 292 aa13.2□□□□□ -0.3
GGPS1-202ENST00000358966 C12orf50Q8NA57 414 aaPredicted RBP13.2□□□□□ -0.3
GGPS1-202ENST00000358966 KCTD6Q8NC69 237 aa13.2□□□□□ -0.3
GGPS1-202ENST00000358966 ADAM32Q8TC27 787 aa13.2□□□□□ -0.3
GGPS1-202ENST00000358966 KIAA1257Q9ULG3 409 aa13.2□□□□□ -0.3
GGPS1-202ENST00000358966 TPX2Q9ULW0 747 aaKnown RBP13.2□□□□□ -0.3
GGPS1-202ENST00000358966 GIT1Q9Y2X7 761 aa13.2□□□□□ -0.3
GGPS1-202ENST00000358966 C5orf42Q9H799 3197 aa13.2□□□□□ -0.3
GGPS1-202ENST00000358966 SCN5AQ14524 2016 aa13.2□□□□□ -0.3
GGPS1-202ENST00000358966 TRUB2O95900 331 aaKnown RBP13.19□□□□□ -0.3
GGPS1-202ENST00000358966 PLCB3Q01970 1234 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 TCTN1Q2MV58 587 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 CLLU1OSQ5K130 101 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 SYCP2LQ5T4T6 812 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 CFAP58Q5T655 872 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 ARHGAP17Q68EM7 881 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 CYB5D1Q6P9G0 228 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 CD300LGQ6UXG3 332 aa13.19□□□□□ -0.3
GGPS1-202ENST00000358966 CLEC20AQ6ZU45 233 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms