RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 LLGL2Q6P1M3 1020 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 PTAR1Q7Z6K3 402 aaPredicted RBP11.53□□□□□ -0.56
COL11A1-202ENST00000358392 LINC00523Q86TU6 105 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 RNF148Q8N7C7 305 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 COMMD8Q9NX08 183 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 TAGLN3Q9UI15 199 aa11.53□□□□□ -0.56
COL11A1-202ENST00000358392 PLA2G6O60733 806 aa11.52□□□□□ -0.56
COL11A1-202ENST00000358392 TNFRSF21O75509 655 aa11.52□□□□□ -0.56
COL11A1-202ENST00000358392 ENO2P09104 434 aaPredicted RBP11.52□□□□□ -0.56
COL11A1-202ENST00000358392 FGFR1P11362 822 aa11.52□□□□□ -0.56
COL11A1-202ENST00000358392 RPL10AP62906 217 aaKnown RBP11.52□□□□□ -0.56
COL11A1-202ENST00000358392 PRKCEQ02156 737 aa11.52□□□□□ -0.56
COL11A1-202ENST00000358392 FGD3Q5JSP0 725 aa11.52□□□□□ -0.56
COL11A1-202ENST00000358392 TSHZ1Q6ZSZ6 1077 aa11.52□□□□□ -0.56
COL11A1-202ENST00000358392 TC2NQ8N9U0 490 aa11.52□□□□□ -0.56
COL11A1-202ENST00000358392 MIEF1Q9NQG6 463 aa11.52□□□□□ -0.56
COL11A1-202ENST00000358392 DYRK1BQ9Y463 629 aa11.52□□□□□ -0.56
COL11A1-202ENST00000358392 CCNT2O60583 730 aaKnown RBP11.52□□□□□ -0.56
COL11A1-202ENST00000358392 ZNF189O75820 626 aaPredicted RBP11.52□□□□□ -0.56
COL11A1-202ENST00000358392 EDRF1Q3B7T1 1238 aa11.52□□□□□ -0.56
COL11A1-202ENST00000358392 ZNF438Q7Z4V0 828 aa11.52□□□□□ -0.56
COL11A1-202ENST00000358392 COL23A1Q86Y22 540 aaPredicted RBP11.52□□□□□ -0.56
COL11A1-202ENST00000358392 TPCN2Q8NHX9 752 aa11.52□□□□□ -0.56
COL11A1-202ENST00000358392 TINF2Q9BSI4 451 aa11.52□□□□□ -0.56
COL11A1-202ENST00000358392 AATKQ6ZMQ8 1374 aa11.52□□□□□ -0.56
COL11A1-202ENST00000358392 TTLL13PA6NNM8 815 aa11.52□□□□□ -0.57
COL11A1-202ENST00000358392 H3BN98 237 aa11.52□□□□□ -0.57
COL11A1-202ENST00000358392 HOXD10P28358 340 aa11.52□□□□□ -0.57
COL11A1-202ENST00000358392 BAATQ14032 418 aaPredicted RBP11.52□□□□□ -0.57
COL11A1-202ENST00000358392 TDRD10Q5VZ19 366 aaKnown RBP11.52□□□□□ -0.57
COL11A1-202ENST00000358392 CLEC4GQ6UXB4 293 aa11.52□□□□□ -0.57
COL11A1-202ENST00000358392 TAF8Q7Z7C8 310 aa11.52□□□□□ -0.57
COL11A1-202ENST00000358392 PARP8Q8N3A8 854 aa11.52□□□□□ -0.57
COL11A1-202ENST00000358392 FAM120BQ96EK7 910 aaKnown RBP11.52□□□□□ -0.57
COL11A1-202ENST00000358392 PHACTR1Q9C0D0 580 aa11.52□□□□□ -0.57
COL11A1-202ENST00000358392 DDIT4Q9NX09 232 aa11.52□□□□□ -0.57
COL11A1-202ENST00000358392 SPACA6W5XKT8 324 aa11.52□□□□□ -0.57
COL11A1-202ENST00000358392 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.52□□□□□ -0.57
COL11A1-202ENST00000358392 FAM200BP0CF97 657 aa11.52□□□□□ -0.57
COL11A1-202ENST00000358392 ZNF177Q13360 481 aaPredicted RBP11.52□□□□□ -0.57
COL11A1-202ENST00000358392 LPIN1Q14693 890 aa11.52□□□□□ -0.57
COL11A1-202ENST00000358392 TTLL9Q3SXZ7 439 aa11.52□□□□□ -0.57
COL11A1-202ENST00000358392 PROSER1Q86XN7 944 aa11.52□□□□□ -0.57
COL11A1-202ENST00000358392 MYO1HQ8N1T3 1032 aa11.52□□□□□ -0.57
COL11A1-202ENST00000358392 MMGT1Q8N4V1 131 aa11.52□□□□□ -0.57
COL11A1-202ENST00000358392 CAMKK2Q96RR4 588 aa11.52□□□□□ -0.57
COL11A1-202ENST00000358392 UBXN6Q9BZV1 441 aa11.52□□□□□ -0.57
COL11A1-202ENST00000358392 EPS8L2Q9H6S3 715 aa11.52□□□□□ -0.57
COL11A1-202ENST00000358392 ADGRL2O95490 1459 aa11.52□□□□□ -0.57
COL11A1-202ENST00000358392 NUDT14O95848 222 aa11.52□□□□□ -0.57
COL11A1-202ENST00000358392 KRT6BP04259 564 aa11.52□□□□□ -0.57
COL11A1-202ENST00000358392 KRT20P35900 424 aa11.52□□□□□ -0.57
COL11A1-202ENST00000358392 KRT6CP48668 564 aa11.52□□□□□ -0.57
COL11A1-202ENST00000358392 BMPR2Q13873 1038 aa11.52□□□□□ -0.57
COL11A1-202ENST00000358392 ZCCHC7Q8N3Z6 543 aaKnown RBP11.52□□□□□ -0.57
COL11A1-202ENST00000358392 HASPINQ8TF76 798 aa11.52□□□□□ -0.57
COL11A1-202ENST00000358392 TMEM121Q9BTD3 319 aa11.52□□□□□ -0.57
COL11A1-202ENST00000358392 NFKBIZQ9BYH8 718 aa11.52□□□□□ -0.57
COL11A1-202ENST00000358392 INPP4BO15327 924 aa11.52□□□□□ -0.57
COL11A1-202ENST00000358392 UBOX5O94941 541 aa11.52□□□□□ -0.57
COL11A1-202ENST00000358392 CD4P01730 458 aa11.52□□□□□ -0.57
COL11A1-202ENST00000358392 FAM58BPP0C7Q3 252 aa11.52□□□□□ -0.57
COL11A1-202ENST00000358392 RXRBP28702 533 aa11.52□□□□□ -0.57
COL11A1-202ENST00000358392 DNAAF5Q86Y56 855 aa11.52□□□□□ -0.57
COL11A1-202ENST00000358392 ADSSL1Q8N142 457 aa11.52□□□□□ -0.57
COL11A1-202ENST00000358392 TRIM63Q969Q1 353 aa11.52□□□□□ -0.57
COL11A1-202ENST00000358392 FICDQ9BVA6 458 aa11.52□□□□□ -0.57
COL11A1-202ENST00000358392 CEP41Q9BYV8 373 aa11.52□□□□□ -0.57
COL11A1-202ENST00000358392 NMRK1Q9NWW6 199 aa11.52□□□□□ -0.57
COL11A1-202ENST00000358392 DNMT1P26358 1616 aaKnown RBP11.52□□□□□ -0.57
COL11A1-202ENST00000358392 NUP153P49790 1475 aaKnown RBP11.51□□□□□ -0.57
COL11A1-202ENST00000358392 IDH3BO43837 385 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 TNNI3P19429 210 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 CALB2P22676 271 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 YY1P25490 414 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 ACADSBP45954 432 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 EFHC1Q5JVL4 640 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 CYP2R1Q6VVX0 501 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 MYCBPAPQ8TBZ2 947 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 MCRS1Q96EZ8 462 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 C7orf25Q9BPX7 421 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 TMEM8AQ9HCN3 771 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 TDRKHQ9Y2W6 561 aaKnown RBP11.51□□□□□ -0.57
COL11A1-202ENST00000358392 DUSP10Q9Y6W6 482 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 PALLDQ8WX93 1383 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 F8VZ95 297 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 PHGDHO43175 533 aaKnown RBP11.51□□□□□ -0.57
COL11A1-202ENST00000358392 ANXA11P50995 505 aaKnown RBP11.51□□□□□ -0.57
COL11A1-202ENST00000358392 C21orf59P57076 290 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 TRAF3Q13114 568 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 PAN2Q504Q3 1202 aaKnown RBP11.51□□□□□ -0.57
COL11A1-202ENST00000358392 KDM7AQ6ZMT4 941 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 APOBEC3FQ8IUX4 373 aaKnown RBP11.51□□□□□ -0.57
COL11A1-202ENST00000358392 LRRC49Q8IUZ0 686 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 RPRD1AQ96P16 312 aaPredicted RBP11.51□□□□□ -0.57
COL11A1-202ENST00000358392 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.51□□□□□ -0.57
COL11A1-202ENST00000358392 ZDHHC9Q9Y397 364 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 EFCAB10A6NFE3 127 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 ASB14A6NK59 587 aa11.51□□□□□ -0.57
COL11A1-202ENST00000358392 BTN3A3O00478 584 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms