RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 SLC25A52Q3SY17 297 aa17.84■□□□□ 0.45
TPM1-205ENST00000357980 OTUD1Q5VV17 481 aaPredicted RBP17.84■□□□□ 0.45
TPM1-205ENST00000357980 BNIPLQ7Z465 357 aa17.84■□□□□ 0.45
TPM1-205ENST00000357980 ADAT2Q7Z6V5 191 aaKnown RBP17.84■□□□□ 0.45
TPM1-205ENST00000357980 TTC9BQ8N6N2 239 aa17.84■□□□□ 0.45
TPM1-205ENST00000357980 FBXO22Q8NEZ5 403 aa17.84■□□□□ 0.45
TPM1-205ENST00000357980 SCAMP5Q8TAC9 235 aa17.84■□□□□ 0.45
TPM1-205ENST00000357980 HERVK_113Q902F9 699 aa17.84■□□□□ 0.45
TPM1-205ENST00000357980 RAPGEF5Q92565 580 aa17.84■□□□□ 0.45
TPM1-205ENST00000357980 ACSF2Q96CM8 615 aaPredicted RBP17.84■□□□□ 0.45
TPM1-205ENST00000357980 RBM41Q96IZ5 413 aaKnown RBP17.84■□□□□ 0.45
TPM1-205ENST00000357980 C8orf48Q96LL4 319 aa17.84■□□□□ 0.45
TPM1-205ENST00000357980 SLITRK1Q96PX8 696 aa17.84■□□□□ 0.45
TPM1-205ENST00000357980 RHOXF2Q9BQY4 288 aa17.84■□□□□ 0.45
TPM1-205ENST00000357980 ZWILCHQ9H900 591 aa17.84■□□□□ 0.45
TPM1-205ENST00000357980 NGRNQ9NPE2 291 aaKnown RBP17.84■□□□□ 0.45
TPM1-205ENST00000357980 PCSK1NQ9UHG2 260 aa17.84■□□□□ 0.45
TPM1-205ENST00000357980 CDY1Q9Y6F8 540 aa17.84■□□□□ 0.45
TPM1-205ENST00000357980 ZNF638Q14966 1978 aaKnown RBP17.84■□□□□ 0.45
TPM1-205ENST00000357980 TRIM66O15016 1216 aa17.84■□□□□ 0.45
TPM1-205ENST00000357980 ADAM12O43184 909 aa17.84■□□□□ 0.45
TPM1-205ENST00000357980 NOS2P35228 1153 aa17.84■□□□□ 0.45
TPM1-205ENST00000357980 DSG1Q02413 1049 aa17.84■□□□□ 0.45
TPM1-205ENST00000357980 KCNT1Q5JUK3 1230 aa17.84■□□□□ 0.45
TPM1-205ENST00000357980 RNF19BQ6ZMZ0 732 aa17.84■□□□□ 0.45
TPM1-205ENST00000357980 SPPL2BQ8TCT7 592 aa17.84■□□□□ 0.45
TPM1-205ENST00000357980 ANKRD7Q92527 254 aa17.84■□□□□ 0.45
TPM1-205ENST00000357980 NCAPGQ9BPX3 1015 aa17.84■□□□□ 0.45
TPM1-205ENST00000357980 HERC2P3Q9BVR0 1158 aa17.84■□□□□ 0.45
TPM1-205ENST00000357980 CALCOCO1Q9P1Z2 691 aa17.84■□□□□ 0.45
TPM1-205ENST00000357980 PI4K2BG5E9Z4 385 aa17.83■□□□□ 0.44
TPM1-205ENST00000357980 LTFP02788 710 aa17.83■□□□□ 0.44
TPM1-205ENST00000357980 RALAP11233 206 aa17.83■□□□□ 0.44
TPM1-205ENST00000357980 DESP17661 470 aa17.83■□□□□ 0.44
TPM1-205ENST00000357980 PTPN7P35236 360 aa17.83■□□□□ 0.44
TPM1-205ENST00000357980 ARPP19P56211 112 aa17.83■□□□□ 0.44
TPM1-205ENST00000357980 COPS2P61201 443 aa17.83■□□□□ 0.44
TPM1-205ENST00000357980 KLF1Q13351 362 aaPredicted RBP17.83■□□□□ 0.44
TPM1-205ENST00000357980 SMC1AQ14683 1233 aaKnown RBP17.83■□□□□ 0.44
TPM1-205ENST00000357980 DCAF6Q58WW2 860 aa17.83■□□□□ 0.44
TPM1-205ENST00000357980 SYPL2Q5VXT5 272 aa17.83■□□□□ 0.44
TPM1-205ENST00000357980 MFSD7Q6UXD7 560 aa17.83■□□□□ 0.44
TPM1-205ENST00000357980 STRADAQ7RTN6 431 aa17.83■□□□□ 0.44
TPM1-205ENST00000357980 DDX53Q86TM3 631 aaKnown RBP17.83■□□□□ 0.44
TPM1-205ENST00000357980 CCDC50Q8IVM0 306 aa17.83■□□□□ 0.44
TPM1-205ENST00000357980 SCN4BQ8IWT1 228 aa17.83■□□□□ 0.44
TPM1-205ENST00000357980 PRELID2Q8N945 189 aa17.83■□□□□ 0.44
TPM1-205ENST00000357980 CMASQ8NFW8 434 aaPredicted RBP17.83■□□□□ 0.44
TPM1-205ENST00000357980 C2orf15Q8WU43 125 aaKnown RBP17.83■□□□□ 0.44
TPM1-205ENST00000357980 CLP1Q92989 425 aaKnown RBP17.83■□□□□ 0.44
TPM1-205ENST00000357980 RNF25Q96BH1 459 aaPredicted RBP17.83■□□□□ 0.44
TPM1-205ENST00000357980 TBCBQ99426 244 aa17.83■□□□□ 0.44
TPM1-205ENST00000357980 KRT12Q99456 494 aa17.83■□□□□ 0.44
TPM1-205ENST00000357980 NPY6RQ99463 290 aa17.83■□□□□ 0.44
TPM1-205ENST00000357980 LRRC1Q9BTT6 524 aa17.83■□□□□ 0.44
TPM1-205ENST00000357980 HTATIP2Q9BUP3 242 aa17.83■□□□□ 0.44
TPM1-205ENST00000357980 OSBPL8Q9BZF1 889 aa17.83■□□□□ 0.44
TPM1-205ENST00000357980 CRISPLD1Q9H336 500 aa17.83■□□□□ 0.44
TPM1-205ENST00000357980 INSL6Q9Y581 213 aa17.83■□□□□ 0.44
TPM1-205ENST00000357980 GOLGA6L10A0A0M3HER8 536 aa17.82■□□□□ 0.44
TPM1-205ENST00000357980 WDR27A2RRH5 827 aa17.82■□□□□ 0.44
TPM1-205ENST00000357980 PRPSAP2O60256 369 aa17.82■□□□□ 0.44
TPM1-205ENST00000357980 RARAP10276 462 aa17.82■□□□□ 0.44
TPM1-205ENST00000357980 PPM1AP35813 382 aa17.82■□□□□ 0.44
TPM1-205ENST00000357980 CDKN2BP42772 138 aa17.82■□□□□ 0.44
TPM1-205ENST00000357980 PITX1P78337 314 aaPredicted RBP17.82■□□□□ 0.44
TPM1-205ENST00000357980 ROR1Q01973 937 aa17.82■□□□□ 0.44
TPM1-205ENST00000357980 LLGL1Q15334 1064 aa17.82■□□□□ 0.44
TPM1-205ENST00000357980 TAZQ16635 292 aa17.82■□□□□ 0.44
TPM1-205ENST00000357980 KIAA1841Q6NSI8 718 aa17.82■□□□□ 0.44
TPM1-205ENST00000357980 SPOCD1Q6ZMY3 1216 aa17.82■□□□□ 0.44
TPM1-205ENST00000357980 PNKPQ96T60 521 aa17.82■□□□□ 0.44
TPM1-205ENST00000357980 SLC9A7Q96T83 725 aa17.82■□□□□ 0.44
TPM1-205ENST00000357980 DDX47Q9H0S4 455 aaKnown RBP17.82■□□□□ 0.44
TPM1-205ENST00000357980 NAALADL1Q9UQQ1 740 aa17.82■□□□□ 0.44
TPM1-205ENST00000357980 PLXNA4Q9HCM2 1894 aa17.82■□□□□ 0.44
TPM1-205ENST00000357980 TARSL2A2RTX5 802 aaKnown RBP17.82■□□□□ 0.44
TPM1-205ENST00000357980 LRRD1A4D1F6 860 aa17.82■□□□□ 0.44
TPM1-205ENST00000357980 ENDOD1O94919 500 aa17.82■□□□□ 0.44
TPM1-205ENST00000357980 RPL17P18621 184 aaKnown RBP17.82■□□□□ 0.44
TPM1-205ENST00000357980 GLUD2P49448 558 aa17.82■□□□□ 0.44
TPM1-205ENST00000357980 GPR15P49685 360 aa17.82■□□□□ 0.44
TPM1-205ENST00000357980 CYP1B1Q16678 543 aa17.82■□□□□ 0.44
TPM1-205ENST00000357980 DDR2Q16832 855 aa17.82■□□□□ 0.44
TPM1-205ENST00000357980 GLE1Q53GS7 698 aaKnown RBP17.82■□□□□ 0.44
TPM1-205ENST00000357980 ZFYVE27Q5T4F4 411 aa17.82■□□□□ 0.44
TPM1-205ENST00000357980 HERC6Q8IVU3 1022 aa17.82■□□□□ 0.44
TPM1-205ENST00000357980 KLHL7Q8IXQ5 586 aa17.82■□□□□ 0.44
TPM1-205ENST00000357980 FIBCD1Q8N539 461 aa17.82■□□□□ 0.44
TPM1-205ENST00000357980 SP7Q8TDD2 431 aaPredicted RBP17.82■□□□□ 0.44
TPM1-205ENST00000357980 TEKT4Q8WW24 435 aa17.82■□□□□ 0.44
TPM1-205ENST00000357980 CLSTN3Q9BQT9 956 aa17.82■□□□□ 0.44
TPM1-205ENST00000357980 PARD6BQ9BYG5 372 aa17.82■□□□□ 0.44
TPM1-205ENST00000357980 ZMYND8Q9ULU4 1186 aaPredicted RBP17.82■□□□□ 0.44
TPM1-205ENST00000357980 STAP1Q9ULZ2 295 aa17.82■□□□□ 0.44
TPM1-205ENST00000357980 C2CD2LO14523 706 aa17.81■□□□□ 0.44
TPM1-205ENST00000357980 HAPLN1P10915 354 aaPredicted RBP17.81■□□□□ 0.44
TPM1-205ENST00000357980 OR1D2P34982 312 aa17.81■□□□□ 0.44
TPM1-205ENST00000357980 SULT1E1P49888 294 aa17.81■□□□□ 0.44
TPM1-205ENST00000357980 ARSEP51690 589 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms