RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 LACRTQ9GZZ8 138 aa26.65■■□□□ 1.86
SSBP3-202ENST00000357475 FBXO44Q9H4M3 255 aa26.65■■□□□ 1.86
SSBP3-202ENST00000357475 METTL5Q9NRN9 209 aaKnown RBP26.65■■□□□ 1.86
SSBP3-202ENST00000357475 A0A1W2PQH9 124 aa26.65■■□□□ 1.86
SSBP3-202ENST00000357475 NRDCO43847 1150 aa26.65■■□□□ 1.86
SSBP3-202ENST00000357475 PAPLNO95428 1278 aa26.65■■□□□ 1.86
SSBP3-202ENST00000357475 ABL1P00519 1130 aa26.65■■□□□ 1.86
SSBP3-202ENST00000357475 CCR2P41597 374 aa26.65■■□□□ 1.86
SSBP3-202ENST00000357475 ZNF268Q14587 947 aaPredicted RBP26.65■■□□□ 1.86
SSBP3-202ENST00000357475 FAM102AQ5T9C2 384 aaPredicted RBP26.65■■□□□ 1.86
SSBP3-202ENST00000357475 TRNP1Q6NT89 227 aa26.65■■□□□ 1.86
SSBP3-202ENST00000357475 PPP1R2P3Q6NXS1 205 aa26.65■■□□□ 1.86
SSBP3-202ENST00000357475 ELMSAN1Q6PJG2 1045 aa26.65■■□□□ 1.86
SSBP3-202ENST00000357475 ELMOD1Q8N336 334 aa26.65■■□□□ 1.86
SSBP3-202ENST00000357475 SMG7Q92540 1137 aaKnown RBP26.65■■□□□ 1.86
SSBP3-202ENST00000357475 TRIM10Q9UDY6 481 aa26.65■■□□□ 1.86
SSBP3-202ENST00000357475 FBXO21O94952 628 aa26.64■■□□□ 1.85
SSBP3-202ENST00000357475 FYNP06241 537 aa26.64■■□□□ 1.85
SSBP3-202ENST00000357475 TMEM253P0C7T8 217 aa26.64■■□□□ 1.85
SSBP3-202ENST00000357475 GJA1P17302 382 aa26.64■■□□□ 1.85
SSBP3-202ENST00000357475 GSCP56915 257 aaPredicted RBP26.64■■□□□ 1.85
SSBP3-202ENST00000357475 GPC5P78333 572 aa26.64■■□□□ 1.85
SSBP3-202ENST00000357475 GAREM2Q75VX8 874 aa26.64■■□□□ 1.85
SSBP3-202ENST00000357475 SCML4Q8N228 414 aa26.64■■□□□ 1.85
SSBP3-202ENST00000357475 C3orf20Q8ND61 904 aa26.64■■□□□ 1.85
SSBP3-202ENST00000357475 CMASQ8NFW8 434 aaPredicted RBP26.64■■□□□ 1.85
SSBP3-202ENST00000357475 JOSD2Q8TAC2 188 aa26.64■■□□□ 1.85
SSBP3-202ENST00000357475 PABPC5Q96DU9 382 aaKnown RBP26.64■■□□□ 1.85
SSBP3-202ENST00000357475 TRIM7Q9C029 511 aa26.64■■□□□ 1.85
SSBP3-202ENST00000357475 COMMD8Q9NX08 183 aa26.64■■□□□ 1.85
SSBP3-202ENST00000357475 STRIP2Q9ULQ0 834 aa26.64■■□□□ 1.85
SSBP3-202ENST00000357475 DUSP10Q9Y6W6 482 aa26.64■■□□□ 1.85
SSBP3-202ENST00000357475 XYLBO75191 536 aa26.63■■□□□ 1.85
SSBP3-202ENST00000357475 IPO7O95373 1038 aaKnown RBP26.63■■□□□ 1.85
SSBP3-202ENST00000357475 F11P03951 625 aa26.63■■□□□ 1.85
SSBP3-202ENST00000357475 CYP1A2P05177 515 aa26.63■■□□□ 1.85
SSBP3-202ENST00000357475 RHOP08100 348 aa26.63■■□□□ 1.85
SSBP3-202ENST00000357475 MYL4P12829 197 aa26.63■■□□□ 1.85
SSBP3-202ENST00000357475 VAV2P52735 878 aa26.63■■□□□ 1.85
SSBP3-202ENST00000357475 RNASE9P60153 205 aaKnown RBP26.63■■□□□ 1.85
SSBP3-202ENST00000357475 YWHAGP61981 247 aaKnown RBP eCLIP26.63■■□□□ 1.85
SSBP3-202ENST00000357475 MAMLD1Q13495 774 aa26.63■■□□□ 1.85
SSBP3-202ENST00000357475 CLUL1Q15846 466 aa26.63■■□□□ 1.85
SSBP3-202ENST00000357475 SLC5A9Q2M3M2 681 aa26.63■■□□□ 1.85
SSBP3-202ENST00000357475 PPP1R15BQ5SWA1 713 aa26.63■■□□□ 1.85
SSBP3-202ENST00000357475 C10orf76Q5T2E6 689 aa26.63■■□□□ 1.85
SSBP3-202ENST00000357475 PLEKHA7Q6IQ23 1121 aa26.63■■□□□ 1.85
SSBP3-202ENST00000357475 TCEAL4Q96EI5 215 aa26.63■■□□□ 1.85
SSBP3-202ENST00000357475 COG5Q9UP83 839 aa26.63■■□□□ 1.85
SSBP3-202ENST00000357475 POU2F2P09086 479 aa26.62■■□□□ 1.85
SSBP3-202ENST00000357475 ZDHHC11BP0C7U3 371 aa26.62■■□□□ 1.85
SSBP3-202ENST00000357475 SRGAP2BP0DMP2 458 aa26.62■■□□□ 1.85
SSBP3-202ENST00000357475 MYBL1P10243 752 aa26.62■■□□□ 1.85
SSBP3-202ENST00000357475 PTPN2P17706 415 aa26.62■■□□□ 1.85
SSBP3-202ENST00000357475 GABRR2P28476 465 aa26.62■■□□□ 1.85
SSBP3-202ENST00000357475 SNX16P57768 344 aa26.62■■□□□ 1.85
SSBP3-202ENST00000357475 RPL7AP62424 266 aaKnown RBP26.62■■□□□ 1.85
SSBP3-202ENST00000357475 KRT83P78385 493 aa26.62■■□□□ 1.85
SSBP3-202ENST00000357475 DNAJC24Q6P3W2 148 aa26.62■■□□□ 1.85
SSBP3-202ENST00000357475 SLC26A9Q7LBE3 791 aa26.62■■□□□ 1.85
SSBP3-202ENST00000357475 KIAA1328Q86T90 577 aa26.62■■□□□ 1.85
SSBP3-202ENST00000357475 ZDHHC17Q8IUH5 632 aa26.62■■□□□ 1.85
SSBP3-202ENST00000357475 EMC1Q8N766 993 aa26.62■■□□□ 1.85
SSBP3-202ENST00000357475 CTNNBL1Q8WYA6 563 aaPredicted RBP26.62■■□□□ 1.85
SSBP3-202ENST00000357475 IRGQQ8WZA9 623 aa26.62■■□□□ 1.85
SSBP3-202ENST00000357475 EDEM1Q92611 657 aa26.62■■□□□ 1.85
SSBP3-202ENST00000357475 FAM149B1Q96BN6 582 aa26.62■■□□□ 1.85
SSBP3-202ENST00000357475 TRIM11Q96F44 468 aa26.62■■□□□ 1.85
SSBP3-202ENST00000357475 S1PR5Q9H228 398 aa26.62■■□□□ 1.85
SSBP3-202ENST00000357475 PIDD1Q9HB75 910 aa26.62■■□□□ 1.85
SSBP3-202ENST00000357475 ASAH2Q9NR71 780 aa26.62■■□□□ 1.85
SSBP3-202ENST00000357475 WDR35Q9P2L0 1181 aa26.62■■□□□ 1.85
SSBP3-202ENST00000357475 SALL4Q9UJQ4 1053 aa26.62■■□□□ 1.85
SSBP3-202ENST00000357475 TMEM59LQ9UK28 342 aa26.62■■□□□ 1.85
SSBP3-202ENST00000357475 MOSPD3O75425 235 aa26.61■■□□□ 1.85
SSBP3-202ENST00000357475 EPHA5P54756 1037 aa26.61■■□□□ 1.85
SSBP3-202ENST00000357475 BSPRYQ5W0U4 402 aa26.61■■□□□ 1.85
SSBP3-202ENST00000357475 MSLNLQ96KJ4 702 aa26.61■■□□□ 1.85
SSBP3-202ENST00000357475 SLITRK1Q96PX8 696 aa26.61■■□□□ 1.85
SSBP3-202ENST00000357475 SELENOOQ9BVL4 669 aa26.61■■□□□ 1.85
SSBP3-202ENST00000357475 OSGEPQ9NPF4 335 aa26.61■■□□□ 1.85
SSBP3-202ENST00000357475 AVENQ9NQS1 362 aaPredicted RBP26.61■■□□□ 1.85
SSBP3-202ENST00000357475 NUDT5Q9UKK9 219 aa26.61■■□□□ 1.85
SSBP3-202ENST00000357475 PPP2R2CQ9Y2T4 447 aa26.61■■□□□ 1.85
SSBP3-202ENST00000357475 A0A1W2PRU2 124 aa26.6■■□□□ 1.85
SSBP3-202ENST00000357475 ZNF840PA6NDX5 716 aa26.6■■□□□ 1.85
SSBP3-202ENST00000357475 RFC1P35251 1148 aaPredicted RBP26.6■■□□□ 1.85
SSBP3-202ENST00000357475 FLT3P36888 993 aa26.6■■□□□ 1.85
SSBP3-202ENST00000357475 CYP4F8P98187 520 aa26.6■■□□□ 1.85
SSBP3-202ENST00000357475 GPR149Q86SP6 731 aa26.6■■□□□ 1.85
SSBP3-202ENST00000357475 MON1AQ86VX9 555 aa26.6■■□□□ 1.85
SSBP3-202ENST00000357475 MCEEQ96PE7 176 aa26.6■■□□□ 1.85
SSBP3-202ENST00000357475 NUP85Q9BW27 656 aa26.6■■□□□ 1.85
SSBP3-202ENST00000357475 PARVAQ9NVD7 372 aa26.6■■□□□ 1.85
SSBP3-202ENST00000357475 INTUQ9ULD6 942 aa26.6■■□□□ 1.85
SSBP3-202ENST00000357475 NAALADL1Q9UQQ1 740 aa26.6■■□□□ 1.85
SSBP3-202ENST00000357475 LTFP02788 710 aa26.6■■□□□ 1.85
SSBP3-202ENST00000357475 KRT3P12035 628 aa26.6■■□□□ 1.85
SSBP3-202ENST00000357475 DEKP35659 375 aaKnown RBP26.6■■□□□ 1.85
SSBP3-202ENST00000357475 OGDHQ02218 1023 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms