RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 ZFRQ96KR1 1074 aaKnown RBP9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 CLIC6Q96NY7 704 aa9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 MRPL45Q9BRJ2 306 aaKnown RBP9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 CAPN10Q9HC96 672 aa9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 KIAA1586Q9HCI6 787 aa9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 CD248Q9HCU0 757 aa9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 ARHGEF4Q9NR80 690 aa9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 PANK4Q9NVE7 773 aa9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 SMPD4Q9NXE4 827 aa9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 CFAP97Q9P2B7 532 aa9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 HCN2Q9UL51 889 aa9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 SLC6A14Q9UN76 642 aa9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 R3HCC1Q9Y3T6 440 aaKnown RBP9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 GOLGA4Q13439 2230 aaKnown RBP9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 PLXNB3Q9ULL4 1909 aa9.13□□□□□ -0.95
COL4A3BP-202ENST00000357457 ADAMTS20P59510 1910 aa9.12□□□□□ -0.95
COL4A3BP-202ENST00000357457 A0A1W2PQF6 199 aa9.12□□□□□ -0.95
COL4A3BP-202ENST00000357457 FAM92AA1XBS5 289 aa9.12□□□□□ -0.95
COL4A3BP-202ENST00000357457 TAF4O00268 1085 aa9.12□□□□□ -0.95
COL4A3BP-202ENST00000357457 HOXC11O43248 304 aaPredicted RBP9.12□□□□□ -0.95
COL4A3BP-202ENST00000357457 AP5Z1O43299 807 aa9.12□□□□□ -0.95
COL4A3BP-202ENST00000357457 HYAL3O43820 417 aaPredicted RBP9.12□□□□□ -0.95
COL4A3BP-202ENST00000357457 SERPINF2P08697 491 aa9.12□□□□□ -0.95
COL4A3BP-202ENST00000357457 ZDHHC11BP0C7U3 371 aa9.12□□□□□ -0.95
COL4A3BP-202ENST00000357457 IDEP14735 1019 aa9.12□□□□□ -0.95
COL4A3BP-202ENST00000357457 YWHAQP27348 245 aa9.12□□□□□ -0.95
COL4A3BP-202ENST00000357457 MAPK8P45983 427 aa9.12□□□□□ -0.95
COL4A3BP-202ENST00000357457 GAD2Q05329 585 aa9.12□□□□□ -0.95
COL4A3BP-202ENST00000357457 PREPLQ4J6C6 727 aaPredicted RBP9.12□□□□□ -0.95
COL4A3BP-202ENST00000357457 MDH1BQ5I0G3 518 aa9.12□□□□□ -0.95
COL4A3BP-202ENST00000357457 LYSMD4Q5XG99 296 aa9.12□□□□□ -0.95
COL4A3BP-202ENST00000357457 SLC36A4Q6YBV0 504 aa9.12□□□□□ -0.95
COL4A3BP-202ENST00000357457 TTC30AQ86WT1 665 aa9.12□□□□□ -0.95
COL4A3BP-202ENST00000357457 NUP93Q8N1F7 819 aa9.12□□□□□ -0.95
COL4A3BP-202ENST00000357457 ZNF454Q8N9F8 522 aa9.12□□□□□ -0.95
COL4A3BP-202ENST00000357457 HMGB4Q8WW32 186 aa9.12□□□□□ -0.95
COL4A3BP-202ENST00000357457 SLITRK1Q96PX8 696 aa9.12□□□□□ -0.95
COL4A3BP-202ENST00000357457 MMS19Q96T76 1030 aa9.12□□□□□ -0.95
COL4A3BP-202ENST00000357457 B3GNT5Q9BYG0 378 aa9.12□□□□□ -0.95
COL4A3BP-202ENST00000357457 ELOVL4Q9GZR5 314 aa9.12□□□□□ -0.95
COL4A3BP-202ENST00000357457 SLC24A3Q9HC58 644 aa9.12□□□□□ -0.95
COL4A3BP-202ENST00000357457 HSPBP1Q9NZL4 362 aa9.12□□□□□ -0.95
COL4A3BP-202ENST00000357457 CHORDC1Q9UHD1 332 aaPredicted RBP9.12□□□□□ -0.95
COL4A3BP-202ENST00000357457 URB1O60287 2271 aaKnown RBP9.12□□□□□ -0.95
COL4A3BP-202ENST00000357457 ITPR1Q14643 2758 aa9.12□□□□□ -0.95
COL4A3BP-202ENST00000357457 APC2O95996 2303 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 A0A087X0B3 334 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 SPAARA0A1B0GVQ0 90 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 TCRBV21S2A2A0A5A6 115 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 TBC1D3BA6NDS4 549 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 SCAMP3O14828 347 aaKnown RBP9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 COCHO43405 550 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 GREM1O60565 184 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 TULP3O75386 442 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 RTN3O95197 1032 aaPredicted RBP9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 ABL1P00519 1130 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 MBL2P11226 248 aaPredicted RBP9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 CD59P13987 128 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 GABRG2P18507 467 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 NTSR1P30989 418 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 TXLNAP40222 546 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 TUBP50607 506 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 EMP3P54852 163 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 FAM193AP78312 1265 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 SIM1P81133 766 aaPredicted RBP9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 RING1Q06587 406 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 ZNF33AQ06730 810 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 HNRNPDQ14103 355 aaKnown RBP9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 HECTD3Q5T447 861 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 KIAA1211LQ6NV74 962 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 PAQR9Q6ZVX9 377 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 ARMCX6Q7L4S7 300 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 HS2ST1Q7LGA3 356 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 TRMT11Q7Z4G4 463 aaKnown RBP9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 RABEPKQ7Z6M1 372 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 RAB44Q7Z6P3 723 aaPredicted RBP9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 CCDC65Q8IXS2 484 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 HDDC3Q8N4P3 179 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 ZNF513Q8N8E2 541 aaPredicted RBP9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 B3GALNT2Q8NCR0 500 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 GLIS3Q8NEA6 775 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 PDZD8Q8NEN9 1154 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 OR6B3Q8NGW1 331 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 ZNF507Q8TCN5 953 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 ZCCHC14Q8WYQ9 949 aaKnown RBP9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 ZNF516Q92618 1163 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 ZNF419Q96HQ0 510 aaPredicted RBP9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 PANK2Q9BZ23 570 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 ZNF518BQ9C0D4 1074 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 GZF1Q9H116 711 aaPredicted RBP9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 SNX25Q9H3E2 840 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 DPEP3Q9H4B8 488 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 ZDHHC4Q9NPG8 344 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 SPHK2Q9NRA0 654 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 DNAAF2Q9NVR5 837 aaKnown RBP9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 COMMD8Q9NX08 183 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 BCCIPQ9P287 314 aaKnown RBP eCLIP9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 DEC1Q9P2X7 70 aa9.11□□□□□ -0.95
COL4A3BP-202ENST00000357457 KLK13Q9UKR3 277 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms