RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 IQANK1A0A1B0GTG1 560 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 MEI4A8MW99 385 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 TRIM49D1C9J1S8 452 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 BTBD19C9JJ37 291 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 E5RJQ4 531 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 F5H423 210 aaPredicted RBP8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 CYB561D2O14569 222 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 PDE5AO76074 875 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 CST3P01034 146 aaPredicted RBP8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 C4BPAP04003 597 aaKnown RBP8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 KRT19P08727 400 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 RBP3P10745 1247 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 ACO1P21399 889 aaKnown RBP8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 MMP8P22894 467 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 EIF3EP60228 445 aaKnown RBP8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 KRT76Q01546 638 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 C1QBPQ07021 282 aaKnown RBP8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 ITGA7Q13683 1181 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 ITGA9Q13797 1035 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 BAATQ14032 418 aaPredicted RBP8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 TAF5Q15542 800 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 C1orf146Q5VVC0 180 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 LRRC8BQ6P9F7 803 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 DARS2Q6PI48 645 aaKnown RBP8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 IZUMO2Q6UXV1 221 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 B3GNT6Q6ZMB0 384 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 TRIM72Q6ZMU5 477 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 ZCCHC23Q6ZST2 131 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 KBTBD2Q8IY47 623 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 CCDC33Q8N5R6 958 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 BANPQ8N9N5 519 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 DIS3LQ8TF46 1054 aaKnown RBP8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 CLEC4DQ8WXI8 215 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 GFM2Q969S9 779 aaKnown RBP8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 CCDC124Q96CT7 223 aaKnown RBP8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 DGCR14Q96DF8 476 aaKnown RBP8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 TIMMDC1Q9NPL8 285 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 DDX18Q9NVP1 670 aaKnown RBP8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 TBCCD1Q9NVR7 557 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 BRWD3Q6RI45 1802 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 TAF1LQ8IZX4 1826 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 TCRBV9S1A1TA0A576 114 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 NDUFB5O43674 189 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 ZC3H11AO75152 810 aaKnown RBP eCLIP8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 CDK4P11802 303 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 HALP42357 657 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 ZNF200P98182 395 aaPredicted RBP8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 TFAMQ00059 246 aaKnown RBP8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 PRKCEQ02156 737 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 DSG1Q02413 1049 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 CLPPQ16740 277 aaPredicted RBP8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 CDO1Q16878 200 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 TMEM132AQ24JP5 1023 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 C6orf163Q5TEZ5 329 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 ADGRD1Q6QNK2 874 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 NPNTQ6UXI9 565 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 TAS1R3Q7RTX0 852 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 PHF13Q86YI8 300 aaPredicted RBP8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 TMEM35BQ8NCS4 154 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 SPATA18Q8TC71 538 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 ATP6V0A1Q93050 837 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 PDCD2LQ9BRP1 358 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 WDR83Q9BRX9 315 aaKnown RBP8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 MTMR12Q9C0I1 747 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 VPS11Q9H270 941 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 ACSS3Q9H6R3 686 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 CYLDQ9NQC7 956 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 KRT82Q9NSB4 513 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 ANKEF1Q9NU02 776 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 STK32BQ9NY57 414 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 UBAP1Q9NZ09 502 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 TBC1D30Q9Y2I9 924 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 MTO1Q9Y2Z2 717 aaKnown RBP8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 MAD1L1Q9Y6D9 718 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 WNK3Q9BYP7 1800 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 CCDC160A6NGH7 325 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 H7C0C1 242 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 TRAFD1O14545 582 aaPredicted RBP8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 TM9SF1O15321 606 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 CIB2O75838 187 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 ITGAVP06756 1048 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 KRT3P12035 628 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 GARTP22102 1010 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 NFKBIAP25963 317 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 SFNP31947 248 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 ATP5OP48047 213 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 SERPINB8P50452 374 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 MYL6P60660 151 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 CHI3L2Q15782 390 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 C1orf228Q6PIY5 440 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 CDHR3Q6ZTQ4 885 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 PCGF5Q86SE9 256 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 PRPF39Q86UA1 669 aaKnown RBP8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 SATL1Q86VE3 508 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 CDR2LQ86X02 465 aaPredicted RBP8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 CCDC60Q8IWA6 550 aaPredicted RBP8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 ARHGAP24Q8N264 748 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 SDR16C5Q8N3Y7 309 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 CCDC110Q8TBZ0 833 aa8.56□□□□□ -1.04
CDC42SE1-201ENST00000357235 DCAKDQ8WVC6 231 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms