RNA–Protein interactions for RNA: ENST00000356025.7

SIRPA-201, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-201ENST00000356025 TMPRSS4Q9NRS4 437 aa12.65□□□□□ -0.38
SIRPA-201ENST00000356025 FNDC3AQ9Y2H6 1198 aaKnown RBP12.65□□□□□ -0.38
SIRPA-201ENST00000356025 ARFGEF1Q9Y6D6 1849 aa12.65□□□□□ -0.38
SIRPA-201ENST00000356025 COL24A1Q17RW2 1714 aa12.65□□□□□ -0.38
SIRPA-201ENST00000356025 FAM237BA0A1B0GVD1 139 aa12.64□□□□□ -0.39
SIRPA-201ENST00000356025 CLDN5O00501 218 aa12.64□□□□□ -0.39
SIRPA-201ENST00000356025 TXNDC9O14530 226 aa12.64□□□□□ -0.39
SIRPA-201ENST00000356025 ADORA2AP29274 412 aa12.64□□□□□ -0.39
SIRPA-201ENST00000356025 GRIA1P42261 906 aa12.64□□□□□ -0.39
SIRPA-201ENST00000356025 RTP1P59025 263 aa12.64□□□□□ -0.39
SIRPA-201ENST00000356025 GPR162Q16538 588 aa12.64□□□□□ -0.39
SIRPA-201ENST00000356025 PMF1Q6P1K2 205 aa12.64□□□□□ -0.39
SIRPA-201ENST00000356025 ISLR2Q6UXK2 745 aa12.64□□□□□ -0.39
SIRPA-201ENST00000356025 PIGWQ7Z7B1 504 aa12.64□□□□□ -0.39
SIRPA-201ENST00000356025 PYROXD2Q8N2H3 581 aa12.64□□□□□ -0.39
SIRPA-201ENST00000356025 SLC4A11Q8NBS3 891 aa12.64□□□□□ -0.39
SIRPA-201ENST00000356025 SLC16A10Q8TF71 515 aa12.64□□□□□ -0.39
SIRPA-201ENST00000356025 SCYL1Q96KG9 808 aa12.64□□□□□ -0.39
SIRPA-201ENST00000356025 H3BRJ5 948 aa12.64□□□□□ -0.39
SIRPA-201ENST00000356025 LSM8O95777 96 aaKnown RBP12.64□□□□□ -0.39
SIRPA-201ENST00000356025 SULT1E1P49888 294 aa12.64□□□□□ -0.39
SIRPA-201ENST00000356025 SARNPP82979 210 aaKnown RBP12.64□□□□□ -0.39
SIRPA-201ENST00000356025 TNFAIP2Q03169 654 aa12.64□□□□□ -0.39
SIRPA-201ENST00000356025 GBE1Q04446 702 aa12.64□□□□□ -0.39
SIRPA-201ENST00000356025 NR1H3Q13133 447 aa12.64□□□□□ -0.39
SIRPA-201ENST00000356025 MTFR1Q15390 333 aa12.64□□□□□ -0.39
SIRPA-201ENST00000356025 C6orf163Q5TEZ5 329 aa12.64□□□□□ -0.39
SIRPA-201ENST00000356025 XYLT1Q86Y38 959 aa12.64□□□□□ -0.39
SIRPA-201ENST00000356025 ERO1BQ86YB8 467 aa12.64□□□□□ -0.39
SIRPA-201ENST00000356025 LGMNQ99538 433 aa12.64□□□□□ -0.39
SIRPA-201ENST00000356025 DPEP3Q9H4B8 488 aa12.64□□□□□ -0.39
SIRPA-201ENST00000356025 TUBGCP4Q9UGJ1 667 aa12.64□□□□□ -0.39
SIRPA-201ENST00000356025 HUS1O60921 280 aa12.64□□□□□ -0.39
SIRPA-201ENST00000356025 MOCS2O96007 188 aaPredicted RBP12.64□□□□□ -0.39
SIRPA-201ENST00000356025 CYP2C9P11712 490 aa12.64□□□□□ -0.39
SIRPA-201ENST00000356025 CYP2B6P20813 491 aa12.64□□□□□ -0.39
SIRPA-201ENST00000356025 GMPRP36959 345 aa12.64□□□□□ -0.39
SIRPA-201ENST00000356025 KLF1Q13351 362 aaPredicted RBP12.64□□□□□ -0.39
SIRPA-201ENST00000356025 RNASEH2BQ5TBB1 312 aaKnown RBP12.64□□□□□ -0.39
SIRPA-201ENST00000356025 MFSD5Q6N075 450 aa12.64□□□□□ -0.39
SIRPA-201ENST00000356025 CTU1Q7Z7A3 348 aaKnown RBP12.64□□□□□ -0.39
SIRPA-201ENST00000356025 IGDCC3Q8IVU1 814 aa12.64□□□□□ -0.39
SIRPA-201ENST00000356025 CNPY3Q9BT09 278 aa12.64□□□□□ -0.39
SIRPA-201ENST00000356025 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.63□□□□□ -0.39
SIRPA-201ENST00000356025 CFAP73A6NFT4 308 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 STK10O94804 968 aaKnown RBP12.63□□□□□ -0.39
SIRPA-201ENST00000356025 TRUB2O95900 331 aaKnown RBP12.63□□□□□ -0.39
SIRPA-201ENST00000356025 VDRP11473 427 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 TFE3P19532 575 aaPredicted RBP12.63□□□□□ -0.39
SIRPA-201ENST00000356025 GNL1P36915 607 aaPredicted RBP12.63□□□□□ -0.39
SIRPA-201ENST00000356025 CCNA1P78396 465 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 C15orf39Q6ZRI6 1047 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 EFCAB3Q8N7B9 438 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.63□□□□□ -0.39
SIRPA-201ENST00000356025 DNAJB3Q8WWF6 145 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 PDLIM7Q9NR12 457 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 TCRBV9S1A1TA0A576 114 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 PAEPP09466 180 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 TGFB3P10600 412 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 TPH1P17752 444 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 KCNA4P22459 653 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 CYP2F1P24903 491 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 KLRC2P26717 231 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 RPL10AP62906 217 aaKnown RBP12.63□□□□□ -0.39
SIRPA-201ENST00000356025 ITKQ08881 620 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 SLC10A6Q3KNW5 377 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 PPP1R2P3Q6NXS1 205 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 POLNQ7Z5Q5 900 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 PRPF39Q86UA1 669 aaKnown RBP12.63□□□□□ -0.39
SIRPA-201ENST00000356025 BEST2Q8NFU1 509 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 TTC8Q8TAM2 541 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 SLC2A14Q8TDB8 520 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 SNRNP25Q9BV90 132 aaKnown RBP12.63□□□□□ -0.39
SIRPA-201ENST00000356025 WDR35Q9P2L0 1181 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 SIX4Q9UIU6 781 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 NUDT5Q9UKK9 219 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 PACSIN3Q9UKS6 424 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 BARX2Q9UMQ3 279 aaPredicted RBP12.63□□□□□ -0.39
SIRPA-201ENST00000356025 SHOC2Q9UQ13 582 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 GPX6P59796 221 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 BEX3Q00994 111 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 RHBDF2Q6PJF5 856 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 KCNT2Q6UVM3 1135 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 POU5F2Q8N7G0 328 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 EDEM1Q92611 657 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 NIFKQ9BYG3 293 aaKnown RBP12.63□□□□□ -0.39
SIRPA-201ENST00000356025 CXCL16Q9H2A7 254 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 NXF3Q9H4D5 531 aaKnown RBP12.63□□□□□ -0.39
SIRPA-201ENST00000356025 CPSF2Q9P2I0 782 aaKnown RBP12.63□□□□□ -0.39
SIRPA-201ENST00000356025 UBR3Q6ZT12 1888 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 B2RBV5 119 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 NEMP1O14524 444 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 ALOX15BO15296 676 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 IL18RAPO95256 599 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 SLC4A1P02730 911 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 XRCC4Q13426 336 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 OLIG2Q13516 323 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 TTC7BQ86TV6 843 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 THTPAQ9BU02 230 aa12.63□□□□□ -0.39
SIRPA-201ENST00000356025 TMEM120AQ9BXJ8 343 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms