RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 LCA5Q86VQ0 697 aa11.65□□□□□ -0.54
FN1-204ENST00000356005 ZNF655Q8N720 491 aaPredicted RBP11.65□□□□□ -0.54
FN1-204ENST00000356005 PIP4K2CQ8TBX8 421 aa11.65□□□□□ -0.54
FN1-204ENST00000356005 CMTM5Q96DZ9 223 aa11.65□□□□□ -0.54
FN1-204ENST00000356005 GTPBP10A4D1E9 387 aaKnown RBP11.65□□□□□ -0.55
FN1-204ENST00000356005 RBP3P10745 1247 aa11.65□□□□□ -0.55
FN1-204ENST00000356005 CHKAP35790 457 aa11.65□□□□□ -0.55
FN1-204ENST00000356005 FLOT2Q14254 428 aa11.65□□□□□ -0.55
FN1-204ENST00000356005 SMYD3Q9H7B4 428 aa11.65□□□□□ -0.55
FN1-204ENST00000356005 FAF1Q9UNN5 650 aaPredicted RBP11.65□□□□□ -0.55
FN1-204ENST00000356005 ADH1CP00326 375 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 GRK4P32298 578 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 TRPC1P48995 793 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 C6orf10Q5SRN2 563 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 WDR18Q9BV38 432 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 SYTL2Q9HCH5 934 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 CISHQ9NSE2 258 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 RNF103-CHMP3A0A140T963 221 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 C1QTNF3-AMACRE9PGA6 284 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 CBX4O00257 560 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 SLC37A4O43826 429 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 HSPA9P38646 679 aaKnown RBP11.64□□□□□ -0.55
FN1-204ENST00000356005 ACOX1Q15067 660 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 LRRC8EQ6NSJ5 796 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 HPS3Q969F9 1004 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 C2orf49Q9BVC5 232 aaPredicted RBP11.64□□□□□ -0.55
FN1-204ENST00000356005 RPRD1BQ9NQG5 326 aaKnown RBP11.64□□□□□ -0.55
FN1-204ENST00000356005 CYP2A7P20853 494 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 SHMT1P34896 483 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 GIT2Q14161 759 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 RASIP1Q5U651 963 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 CXCL17Q6UXB2 119 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 ABCC13Q9NSE7 274 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 LMO7Q8WWI1 1683 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 ADCYAP1R1P41586 468 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 ARFIP2P53365 341 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 NOMO2Q5JPE7 1267 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 SLC30A10Q6XR72 485 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 ZNF555Q8NEP9 628 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 BSNDQ8WZ55 320 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 RUSC1Q9BVN2 902 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 PARD6BQ9BYG5 372 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 SNCAIPQ9Y6H5 919 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 SNRPAP09012 282 aaKnown RBP11.64□□□□□ -0.55
FN1-204ENST00000356005 TMEM253P0C7T8 217 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 MAPK8P45983 427 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 PLA2G4AP47712 749 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 PPP2R2AP63151 447 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 RARS2Q5T160 578 aaKnown RBP11.64□□□□□ -0.55
FN1-204ENST00000356005 ZNF720Q7Z2F6 126 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 METTL16Q86W50 562 aaKnown RBP11.64□□□□□ -0.55
FN1-204ENST00000356005 SLC28A3Q9HAS3 691 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 EIF3LQ9Y262 564 aaKnown RBP11.64□□□□□ -0.55
FN1-204ENST00000356005 MRPS17Q9Y2R5 130 aaKnown RBP11.64□□□□□ -0.55
FN1-204ENST00000356005 A0A1B0GTH6 734 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 FAM46CQ5VWP2 391 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 FBXL19Q6PCT2 694 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 WDR48Q8TAF3 677 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 LENG9Q96B70 501 aa11.64□□□□□ -0.55
FN1-204ENST00000356005 PDGFDQ9GZP0 370 aaPredicted RBP11.64□□□□□ -0.55
FN1-204ENST00000356005 ASGR1P07306 291 aa11.63□□□□□ -0.55
FN1-204ENST00000356005 CNTFP26441 200 aa11.63□□□□□ -0.55
FN1-204ENST00000356005 SKOR1P84550 965 aa11.63□□□□□ -0.55
FN1-204ENST00000356005 RBM15Q96T37 977 aaKnown RBP eCLIP11.63□□□□□ -0.552e-6■□□□□ 10.6
FN1-204ENST00000356005 HIPK3Q9H422 1215 aa11.63□□□□□ -0.55
FN1-204ENST00000356005 M0R3G1 203 aa11.63□□□□□ -0.55
FN1-204ENST00000356005 PTPN11Q06124 597 aaPredicted RBP11.63□□□□□ -0.55
FN1-204ENST00000356005 FAM110CQ1W6H9 321 aa11.63□□□□□ -0.55
FN1-204ENST00000356005 APOBEC3HQ6NTF7 200 aaKnown RBP11.63□□□□□ -0.55
FN1-204ENST00000356005 FBXL5Q9UKA1 691 aa11.63□□□□□ -0.55
FN1-204ENST00000356005 LGALS2P05162 132 aa11.63□□□□□ -0.55
FN1-204ENST00000356005 MAGOHP61326 146 aaKnown RBP11.63□□□□□ -0.55
FN1-204ENST00000356005 MARC1Q5VT66 337 aa11.63□□□□□ -0.55
FN1-204ENST00000356005 CLYBLQ8N0X4 340 aa11.63□□□□□ -0.55
FN1-204ENST00000356005 ARMC2Q8NEN0 867 aa11.63□□□□□ -0.55
FN1-204ENST00000356005 SCOCQ9UIL1 159 aa11.63□□□□□ -0.55
FN1-204ENST00000356005 CSH1P0DML2 217 aa11.63□□□□□ -0.55
FN1-204ENST00000356005 CSH2P0DML3 217 aa11.63□□□□□ -0.55
FN1-204ENST00000356005 FAM133BQ5BKY9 247 aaKnown RBP11.63□□□□□ -0.55
FN1-204ENST00000356005 C1orf146Q5VVC0 180 aa11.63□□□□□ -0.55
FN1-204ENST00000356005 PPTC7Q8NI37 304 aa11.63□□□□□ -0.55
FN1-204ENST00000356005 DEFB118Q96PH6 123 aa11.63□□□□□ -0.55
FN1-204ENST00000356005 RBBP8Q99708 897 aa11.63□□□□□ -0.55
FN1-204ENST00000356005 GLP2RO95838 553 aa11.63□□□□□ -0.55
FN1-204ENST00000356005 C21orf59P57076 290 aa11.63□□□□□ -0.55
FN1-204ENST00000356005 SNRPD1P62314 119 aaKnown RBP11.63□□□□□ -0.55
FN1-204ENST00000356005 ERMARDQ5T6L9 678 aa11.63□□□□□ -0.55
FN1-204ENST00000356005 CEP68Q76N32 757 aa11.63□□□□□ -0.55
FN1-204ENST00000356005 CEP70Q8NHQ1 597 aa11.63□□□□□ -0.55
FN1-204ENST00000356005 MCOLN3Q8TDD5 553 aa11.63□□□□□ -0.55
FN1-204ENST00000356005 TMA16Q96EY4 203 aaKnown RBP11.63□□□□□ -0.55
FN1-204ENST00000356005 LRRC40Q9H9A6 602 aa11.63□□□□□ -0.55
FN1-204ENST00000356005 SAE1Q9UBE0 346 aaPredicted RBP11.63□□□□□ -0.55
FN1-204ENST00000356005 TUBGCP4Q9UGJ1 667 aa11.63□□□□□ -0.55
FN1-204ENST00000356005 NUP98P52948 1817 aa11.63□□□□□ -0.55
FN1-204ENST00000356005 SDR42E2A6NKP2 422 aa11.63□□□□□ -0.55
FN1-204ENST00000356005 TRPC5OSA6NMA1 111 aa11.63□□□□□ -0.55
FN1-204ENST00000356005 IRF6O14896 467 aa11.63□□□□□ -0.55
FN1-204ENST00000356005 GZMAP12544 262 aa11.63□□□□□ -0.55
FN1-204ENST00000356005 ACAP1Q15027 740 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms