RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 UNC45BQ8IWX7 931 aa15.43■□□□□ 0.06
COL17A1-201ENST00000353479 EMILIN2Q9BXX0 1053 aa15.43■□□□□ 0.06
COL17A1-201ENST00000353479 CIPCQ9C0C6 399 aa15.43■□□□□ 0.06
COL17A1-201ENST00000353479 ATXN3LQ9H3M9 355 aa15.43■□□□□ 0.06
COL17A1-201ENST00000353479 SYNDIG1Q9H7V2 258 aa15.43■□□□□ 0.06
COL17A1-201ENST00000353479 ST3GAL5Q9UNP4 418 aa15.43■□□□□ 0.06
COL17A1-201ENST00000353479 E5RJQ4 531 aa15.42■□□□□ 0.06
COL17A1-201ENST00000353479 USP17L7P0C7H9 530 aa15.42■□□□□ 0.06
COL17A1-201ENST00000353479 GEMIN4P57678 1058 aaKnown RBP15.42■□□□□ 0.06
COL17A1-201ENST00000353479 PTENP60484 403 aa15.42■□□□□ 0.06
COL17A1-201ENST00000353479 RHOAP61586 193 aa15.42■□□□□ 0.06
COL17A1-201ENST00000353479 ZBTB41Q5SVQ8 909 aa15.42■□□□□ 0.06
COL17A1-201ENST00000353479 TMEM86AQ8N2M4 240 aa15.42■□□□□ 0.06
COL17A1-201ENST00000353479 MIPOL1Q8TD10 442 aa15.42■□□□□ 0.06
COL17A1-201ENST00000353479 CDK5RAP1Q96SZ6 601 aaKnown RBP15.42■□□□□ 0.06
COL17A1-201ENST00000353479 ROPN1BQ9BZX4 212 aaPredicted RBP15.42■□□□□ 0.06
COL17A1-201ENST00000353479 WWP1Q9H0M0 922 aa15.42■□□□□ 0.06
COL17A1-201ENST00000353479 ROPN1Q9HAT0 212 aaPredicted RBP15.42■□□□□ 0.06
COL17A1-201ENST00000353479 NT5MQ9NPB1 228 aa15.42■□□□□ 0.06
COL17A1-201ENST00000353479 TSPAN3O60637 253 aa15.42■□□□□ 0.06
COL17A1-201ENST00000353479 ATP5HO75947 161 aa15.42■□□□□ 0.06
COL17A1-201ENST00000353479 FBXO36Q8NEA4 188 aa15.42■□□□□ 0.06
COL17A1-201ENST00000353479 GRAMD1AQ96CP6 724 aa15.42■□□□□ 0.06
COL17A1-201ENST00000353479 GPR20Q99678 358 aa15.42■□□□□ 0.06
COL17A1-201ENST00000353479 SLC7A5P2Q9GIP4 190 aa15.42■□□□□ 0.06
COL17A1-201ENST00000353479 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.42■□□□□ 0.06
COL17A1-201ENST00000353479 DLG5Q8TDM6 1919 aa15.42■□□□□ 0.06
COL17A1-201ENST00000353479 ZBTB48P10074 688 aaPredicted RBP15.42■□□□□ 0.06
COL17A1-201ENST00000353479 ACTL9Q8TC94 416 aa15.42■□□□□ 0.06
COL17A1-201ENST00000353479 MRPL42Q9Y6G3 142 aaKnown RBP15.42■□□□□ 0.06
COL17A1-201ENST00000353479 CCNE2O96020 404 aa15.42■□□□□ 0.06
COL17A1-201ENST00000353479 ALDH18A1P54886 795 aaKnown RBP15.42■□□□□ 0.06
COL17A1-201ENST00000353479 SLC6A3Q01959 620 aa15.42■□□□□ 0.06
COL17A1-201ENST00000353479 SPDYAQ5MJ70 313 aa15.42■□□□□ 0.06
COL17A1-201ENST00000353479 ABHD15Q6UXT9 468 aa15.42■□□□□ 0.06
COL17A1-201ENST00000353479 LRRC55Q6ZSA7 311 aa15.42■□□□□ 0.06
COL17A1-201ENST00000353479 HELQQ8TDG4 1101 aa15.42■□□□□ 0.06
COL17A1-201ENST00000353479 USP13Q92995 863 aaPredicted RBP15.42■□□□□ 0.06
COL17A1-201ENST00000353479 VCPIP1Q96JH7 1222 aa15.42■□□□□ 0.06
COL17A1-201ENST00000353479 DNAJC18Q9H819 358 aa15.42■□□□□ 0.06
COL17A1-201ENST00000353479 CCDC22O60826 627 aa15.42■□□□□ 0.06
COL17A1-201ENST00000353479 CRYBB1P53674 252 aaPredicted RBP15.42■□□□□ 0.06
COL17A1-201ENST00000353479 CCDC15Q0P6D6 951 aa15.42■□□□□ 0.06
COL17A1-201ENST00000353479 DEFB118Q96PH6 123 aa15.42■□□□□ 0.06
COL17A1-201ENST00000353479 ACP6Q9NPH0 428 aa15.42■□□□□ 0.06
COL17A1-201ENST00000353479 UBP1Q9NZI7 540 aa15.42■□□□□ 0.06
COL17A1-201ENST00000353479 SIK3Q9Y2K2 1263 aa15.42■□□□□ 0.06
COL17A1-201ENST00000353479 BMP6P22004 513 aa15.41■□□□□ 0.06
COL17A1-201ENST00000353479 NCKAP1LP55160 1127 aa15.41■□□□□ 0.06
COL17A1-201ENST00000353479 GRAMD1BQ3KR37 738 aa15.41■□□□□ 0.06
COL17A1-201ENST00000353479 C1orf146Q5VVC0 180 aa15.41■□□□□ 0.06
COL17A1-201ENST00000353479 SPATA21Q7Z572 469 aa15.41■□□□□ 0.06
COL17A1-201ENST00000353479 C4orf32Q8N8J7 132 aa15.41■□□□□ 0.06
COL17A1-201ENST00000353479 ZNF384Q8TF68 577 aa15.41■□□□□ 0.06
COL17A1-201ENST00000353479 HMGCRP04035 888 aa15.41■□□□□ 0.06
COL17A1-201ENST00000353479 MMP3P08254 477 aa15.41■□□□□ 0.06
COL17A1-201ENST00000353479 PTPN1P18031 435 aaKnown RBP15.41■□□□□ 0.06
COL17A1-201ENST00000353479 KRT4P19013 534 aa15.41■□□□□ 0.06
COL17A1-201ENST00000353479 HSD17B3P37058 310 aa15.41■□□□□ 0.06
COL17A1-201ENST00000353479 DLK2Q6UY11 383 aa15.41■□□□□ 0.06
COL17A1-201ENST00000353479 FICDQ9BVA6 458 aa15.41■□□□□ 0.06
COL17A1-201ENST00000353479 TMEM120BA0PK00 339 aa15.41■□□□□ 0.06
COL17A1-201ENST00000353479 TRIM49D1C9J1S8 452 aa15.41■□□□□ 0.06
COL17A1-201ENST00000353479 PPP1R37O75864 691 aa15.41■□□□□ 0.06
COL17A1-201ENST00000353479 PLD1Q13393 1074 aa15.41■□□□□ 0.06
COL17A1-201ENST00000353479 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.41■□□□□ 0.06
COL17A1-201ENST00000353479 LCA5Q86VQ0 697 aa15.41■□□□□ 0.06
COL17A1-201ENST00000353479 NPHS2Q9NP85 383 aa15.41■□□□□ 0.06
COL17A1-201ENST00000353479 NUDT5Q9UKK9 219 aa15.41■□□□□ 0.06
COL17A1-201ENST00000353479 SDR42E2A6NKP2 422 aa15.41■□□□□ 0.06
COL17A1-201ENST00000353479 H0Y3Z8 333 aa15.41■□□□□ 0.06
COL17A1-201ENST00000353479 AGBL2Q5U5Z8 902 aa15.41■□□□□ 0.06
COL17A1-201ENST00000353479 EEF1DP3Q658K8 133 aa15.41■□□□□ 0.06
COL17A1-201ENST00000353479 PNKPQ96T60 521 aa15.41■□□□□ 0.06
COL17A1-201ENST00000353479 CEP41Q9BYV8 373 aa15.41■□□□□ 0.06
COL17A1-201ENST00000353479 UBXN6Q9BZV1 441 aa15.41■□□□□ 0.06
COL17A1-201ENST00000353479 RNPEPQ9H4A4 650 aa15.41■□□□□ 0.06
COL17A1-201ENST00000353479 GGT7Q9UJ14 662 aa15.41■□□□□ 0.06
COL17A1-201ENST00000353479 KCPQ6ZWJ8 1503 aa15.41■□□□□ 0.06
COL17A1-201ENST00000353479 TBX2Q13207 712 aaPredicted RBP15.4■□□□□ 0.06
COL17A1-201ENST00000353479 CCNG2Q16589 344 aa15.4■□□□□ 0.06
COL17A1-201ENST00000353479 SNX31Q8N9S9 440 aa15.4■□□□□ 0.06
COL17A1-201ENST00000353479 ULBP1Q9BZM6 244 aa15.4■□□□□ 0.06
COL17A1-201ENST00000353479 RRN3Q9NYV6 651 aa15.4■□□□□ 0.06
COL17A1-201ENST00000353479 MORC2Q9Y6X9 1032 aaPredicted RBP15.4■□□□□ 0.06
COL17A1-201ENST00000353479 RTN3O95197 1032 aaPredicted RBP15.4■□□□□ 0.06
COL17A1-201ENST00000353479 RPSAP08865 295 aaKnown RBP15.4■□□□□ 0.06
COL17A1-201ENST00000353479 PALB2Q86YC2 1186 aa15.4■□□□□ 0.06
COL17A1-201ENST00000353479 SGSM3Q96HU1 749 aa15.4■□□□□ 0.06
COL17A1-201ENST00000353479 SERPINB11Q96P15 392 aa15.4■□□□□ 0.06
COL17A1-201ENST00000353479 FAM129AQ9BZQ8 928 aa15.4■□□□□ 0.06
COL17A1-201ENST00000353479 NMRK2Q9NPI5 230 aa15.4■□□□□ 0.06
COL17A1-201ENST00000353479 GRID1Q9ULK0 1009 aa15.4■□□□□ 0.06
COL17A1-201ENST00000353479 TUFMP49411 452 aaKnown RBP15.4■□□□□ 0.06
COL17A1-201ENST00000353479 TUBP50607 506 aa15.4■□□□□ 0.06
COL17A1-201ENST00000353479 TRADDQ15628 312 aa15.4■□□□□ 0.06
COL17A1-201ENST00000353479 ARSHQ5FYA8 562 aa15.4■□□□□ 0.06
COL17A1-201ENST00000353479 LVRNQ6Q4G3 990 aa15.4■□□□□ 0.06
COL17A1-201ENST00000353479 SGF29Q96ES7 293 aa15.4■□□□□ 0.06
COL17A1-201ENST00000353479 IGFLR1Q9H665 355 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms