RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 EML4Q9HC35 981 aaKnown RBP15.27■□□□□ 0.03
NUP50-201ENST00000347635 CHEK2O96017 543 aa15.27■□□□□ 0.03
NUP50-201ENST00000347635 BNIP1Q12981 228 aa15.27■□□□□ 0.03
NUP50-201ENST00000347635 SLC35G1Q2M3R5 365 aa15.27■□□□□ 0.03
NUP50-201ENST00000347635 EFHC1Q5JVL4 640 aa15.27■□□□□ 0.03
NUP50-201ENST00000347635 F8VP50 259 aa15.26■□□□□ 0.03
NUP50-201ENST00000347635 VEPH1Q14D04 833 aa15.26■□□□□ 0.03
NUP50-201ENST00000347635 DENND5BQ6ZUT9 1274 aa15.26■□□□□ 0.03
NUP50-201ENST00000347635 C12orf56Q8IXR9 622 aa15.26■□□□□ 0.03
NUP50-201ENST00000347635 ZNF398Q8TD17 642 aa15.26■□□□□ 0.03
NUP50-201ENST00000347635 PRPF31Q8WWY3 499 aaKnown RBP15.26■□□□□ 0.03
NUP50-201ENST00000347635 CCDC138Q96M89 665 aa15.26■□□□□ 0.03
NUP50-201ENST00000347635 ZNF212Q9UDV6 495 aa15.26■□□□□ 0.03
NUP50-201ENST00000347635 ZMYM2Q9UBW7 1377 aa15.26■□□□□ 0.03
NUP50-201ENST00000347635 MAP3K6O95382 1288 aa15.26■□□□□ 0.03
NUP50-201ENST00000347635 PSMG1O95456 288 aa15.26■□□□□ 0.03
NUP50-201ENST00000347635 SLURP2P0DP57 97 aa15.26■□□□□ 0.03
NUP50-201ENST00000347635 PTDSS1P48651 473 aaKnown RBP15.26■□□□□ 0.03
NUP50-201ENST00000347635 TPI1P60174 286 aa15.26■□□□□ 0.03
NUP50-201ENST00000347635 PIGWQ7Z7B1 504 aa15.26■□□□□ 0.03
NUP50-201ENST00000347635 SHCBP1Q8NEM2 672 aa15.26■□□□□ 0.03
NUP50-201ENST00000347635 MRPL1Q9BYD6 325 aaKnown RBP15.26■□□□□ 0.03
NUP50-201ENST00000347635 GRHL1Q9NZI5 618 aa15.26■□□□□ 0.03
NUP50-201ENST00000347635 AJAP1Q9UKB5 411 aaPredicted RBP15.26■□□□□ 0.03
NUP50-201ENST00000347635 DTNAQ9Y4J8 743 aa15.26■□□□□ 0.03
NUP50-201ENST00000347635 hCG_2014768A0A024R1R8 64 aa15.26■□□□□ 0.03
NUP50-201ENST00000347635 RNF103-CHMP3A0A140T963 221 aa15.26■□□□□ 0.03
NUP50-201ENST00000347635 GSTA4O15217 222 aa15.26■□□□□ 0.03
NUP50-201ENST00000347635 VDRP11473 427 aa15.26■□□□□ 0.03
NUP50-201ENST00000347635 ATP4AP20648 1035 aa15.26■□□□□ 0.03
NUP50-201ENST00000347635 BFSP2Q13515 415 aa15.26■□□□□ 0.03
NUP50-201ENST00000347635 PDK1Q15118 436 aa15.26■□□□□ 0.03
NUP50-201ENST00000347635 PARP6Q2NL67 630 aa15.26■□□□□ 0.03
NUP50-201ENST00000347635 SETD3Q86TU7 594 aaPredicted RBP15.26■□□□□ 0.03
NUP50-201ENST00000347635 SCN4BQ8IWT1 228 aa15.26■□□□□ 0.03
NUP50-201ENST00000347635 TMEM161BQ8NDZ6 487 aa15.26■□□□□ 0.03
NUP50-201ENST00000347635 KLHL4Q9C0H6 718 aa15.26■□□□□ 0.03
NUP50-201ENST00000347635 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.26■□□□□ 0.03
NUP50-201ENST00000347635 LAMB4A4D0S4 1761 aa15.26■□□□□ 0.03
NUP50-201ENST00000347635 AP3B1O00203 1094 aa15.26■□□□□ 0.03
NUP50-201ENST00000347635 APOEP02649 317 aa15.26■□□□□ 0.03
NUP50-201ENST00000347635 NCKAP1LP55160 1127 aa15.26■□□□□ 0.03
NUP50-201ENST00000347635 FAAP100Q0VG06 881 aa15.26■□□□□ 0.03
NUP50-201ENST00000347635 PDCD2Q16342 344 aaPredicted RBP15.26■□□□□ 0.03
NUP50-201ENST00000347635 TRABD2AQ86V40 505 aa15.26■□□□□ 0.03
NUP50-201ENST00000347635 LRRC43Q8N309 656 aa15.26■□□□□ 0.03
NUP50-201ENST00000347635 C12orf50Q8NA57 414 aaPredicted RBP15.26■□□□□ 0.03
NUP50-201ENST00000347635 EME1Q96AY2 570 aa15.26■□□□□ 0.03
NUP50-201ENST00000347635 KLRG1Q96E93 195 aa15.26■□□□□ 0.03
NUP50-201ENST00000347635 CNPY3Q9BT09 278 aa15.26■□□□□ 0.03
NUP50-201ENST00000347635 STAG3L1P0CL83 205 aa15.25■□□□□ 0.03
NUP50-201ENST00000347635 AKR1A1P14550 325 aa15.25■□□□□ 0.03
NUP50-201ENST00000347635 HADHBP55084 474 aaKnown RBP15.25■□□□□ 0.03
NUP50-201ENST00000347635 ZNF280AP59817 542 aaPredicted RBP15.25■□□□□ 0.03
NUP50-201ENST00000347635 FLOT2Q14254 428 aa15.25■□□□□ 0.03
NUP50-201ENST00000347635 MPZL3Q6UWV2 235 aa15.25■□□□□ 0.03
NUP50-201ENST00000347635 PBXIP1Q96AQ6 731 aa15.25■□□□□ 0.03
NUP50-201ENST00000347635 KREMEN1Q96MU8 473 aa15.25■□□□□ 0.03
NUP50-201ENST00000347635 MMADHCQ9H3L0 296 aaPredicted RBP15.25■□□□□ 0.03
NUP50-201ENST00000347635 CCDC134Q9H6E4 229 aa15.25■□□□□ 0.03
NUP50-201ENST00000347635 ZDHHC18Q9NUE0 388 aa15.25■□□□□ 0.03
NUP50-201ENST00000347635 ARMCX1Q9P291 453 aa15.25■□□□□ 0.03
NUP50-201ENST00000347635 UBQLN1Q9UMX0 589 aaKnown RBP15.25■□□□□ 0.03
NUP50-201ENST00000347635 SLC15A5A6NIM6 579 aa15.25■□□□□ 0.03
NUP50-201ENST00000347635 HOXA2O43364 376 aa15.25■□□□□ 0.03
NUP50-201ENST00000347635 NUDT2P50583 147 aa15.25■□□□□ 0.03
NUP50-201ENST00000347635 USP10Q14694 798 aaKnown RBP15.25■□□□□ 0.03
NUP50-201ENST00000347635 LRRC38Q5VT99 294 aa15.25■□□□□ 0.03
NUP50-201ENST00000347635 TRPM4Q8TD43 1214 aa15.25■□□□□ 0.03
NUP50-201ENST00000347635 GPATCH2LQ9NWQ4 482 aa15.25■□□□□ 0.03
NUP50-201ENST00000347635 EEF2KO00418 725 aaKnown RBP15.25■□□□□ 0.03
NUP50-201ENST00000347635 ADORA2AP29274 412 aa15.25■□□□□ 0.03
NUP50-201ENST00000347635 YWHAHQ04917 246 aaPredicted RBP15.25■□□□□ 0.03
NUP50-201ENST00000347635 CDR2LQ86X02 465 aaPredicted RBP15.25■□□□□ 0.03
NUP50-201ENST00000347635 C20orf96Q9NUD7 363 aaPredicted RBP15.25■□□□□ 0.03
NUP50-201ENST00000347635 A8MUI8 341 aa15.25■□□□□ 0.03
NUP50-201ENST00000347635 PCSK1P29120 753 aa15.25■□□□□ 0.03
NUP50-201ENST00000347635 PMLP29590 882 aa15.25■□□□□ 0.03
NUP50-201ENST00000347635 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.25■□□□□ 0.03
NUP50-201ENST00000347635 CCNJLQ8IV13 435 aa15.25■□□□□ 0.03
NUP50-201ENST00000347635 GALNT4Q8N4A0 578 aa15.25■□□□□ 0.03
NUP50-201ENST00000347635 JADE3Q92613 823 aa15.25■□□□□ 0.03
NUP50-201ENST00000347635 ATP6V1E2Q96A05 226 aa15.25■□□□□ 0.03
NUP50-201ENST00000347635 ORC6Q9Y5N6 252 aa15.25■□□□□ 0.03
NUP50-201ENST00000347635 CTSHP09668 335 aa15.24■□□□□ 0.03
NUP50-201ENST00000347635 PEX5P50542 639 aa15.24■□□□□ 0.03
NUP50-201ENST00000347635 SLC12A1Q13621 1099 aa15.24■□□□□ 0.03
NUP50-201ENST00000347635 PPP2R3CQ969Q6 453 aa15.24■□□□□ 0.03
NUP50-201ENST00000347635 GFM2Q969S9 779 aaKnown RBP15.24■□□□□ 0.03
NUP50-201ENST00000347635 MTG1Q9BT17 334 aaPredicted RBP15.24■□□□□ 0.03
NUP50-201ENST00000347635 SLCO1B3Q9NPD5 702 aa15.24■□□□□ 0.03
NUP50-201ENST00000347635 EDF1O60869 148 aaKnown RBP15.24■□□□□ 0.03
NUP50-201ENST00000347635 TGM2P21980 687 aa15.24■□□□□ 0.03
NUP50-201ENST00000347635 ATXN3P54252 364 aaPredicted RBP15.24■□□□□ 0.03
NUP50-201ENST00000347635 RNF135Q8IUD6 432 aa15.24■□□□□ 0.03
NUP50-201ENST00000347635 FAM172AQ8WUF8 416 aa15.24■□□□□ 0.03
NUP50-201ENST00000347635 LRMDAQ9H2I8 198 aa15.24■□□□□ 0.03
NUP50-201ENST00000347635 C10orf88Q9H8K7 445 aa15.24■□□□□ 0.03
NUP50-201ENST00000347635 PLEKHA5Q9HAU0 1116 aa15.24■□□□□ 0.03
NUP50-201ENST00000347635 SUN2Q9UH99 717 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms