RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 FAM161BQ96MY7 647 aa19.94■□□□□ 0.78
CHMP4A-201ENST00000347519 TSGA10Q9BZW7 698 aa19.94■□□□□ 0.78
CHMP4A-201ENST00000347519 NSUN3Q9H649 340 aaKnown RBP19.94■□□□□ 0.78
CHMP4A-201ENST00000347519 IGFLR1Q9H665 355 aa19.94■□□□□ 0.78
CHMP4A-201ENST00000347519 ZNF334Q9HCZ1 680 aaPredicted RBP19.94■□□□□ 0.78
CHMP4A-201ENST00000347519 GMIPQ9P107 970 aa19.94■□□□□ 0.78
CHMP4A-201ENST00000347519 UVRAGQ9P2Y5 699 aa19.94■□□□□ 0.78
CHMP4A-201ENST00000347519 CAPN6Q9Y6Q1 641 aa19.94■□□□□ 0.78
CHMP4A-201ENST00000347519 SCINQ9Y6U3 715 aa19.94■□□□□ 0.78
CHMP4A-201ENST00000347519 OBSL1O75147 1896 aa19.93■□□□□ 0.78
CHMP4A-201ENST00000347519 CCL16O15467 120 aa19.93■□□□□ 0.78
CHMP4A-201ENST00000347519 LINC01565O15544 149 aa19.93■□□□□ 0.78
CHMP4A-201ENST00000347519 KRT86O43790 486 aa19.93■□□□□ 0.78
CHMP4A-201ENST00000347519 RTN3O95197 1032 aaPredicted RBP19.93■□□□□ 0.78
CHMP4A-201ENST00000347519 EPHB3P54753 998 aa19.93■□□□□ 0.78
CHMP4A-201ENST00000347519 TAF10Q12962 218 aa19.93■□□□□ 0.78
CHMP4A-201ENST00000347519 PLD1Q13393 1074 aa19.93■□□□□ 0.78
CHMP4A-201ENST00000347519 PPM1LQ5SGD2 360 aa19.93■□□□□ 0.78
CHMP4A-201ENST00000347519 ZNF697Q5TEC3 545 aa19.93■□□□□ 0.78
CHMP4A-201ENST00000347519 HS6ST3Q8IZP7 471 aa19.93■□□□□ 0.78
CHMP4A-201ENST00000347519 TXLNBQ8N3L3 684 aa19.93■□□□□ 0.78
CHMP4A-201ENST00000347519 IRGQQ8WZA9 623 aa19.93■□□□□ 0.78
CHMP4A-201ENST00000347519 CEP295NLQ96MC4 621 aa19.93■□□□□ 0.78
CHMP4A-201ENST00000347519 GOLPH3Q9H4A6 298 aa19.93■□□□□ 0.78
CHMP4A-201ENST00000347519 PLEKHA4Q9H4M7 779 aa19.93■□□□□ 0.78
CHMP4A-201ENST00000347519 OSER1Q9NX31 292 aa19.93■□□□□ 0.78
CHMP4A-201ENST00000347519 ANAPC7Q9UJX3 599 aa19.93■□□□□ 0.78
CHMP4A-201ENST00000347519 MTCH2Q9Y6C9 303 aa19.93■□□□□ 0.78
CHMP4A-201ENST00000347519 ANAPC1Q9H1A4 1944 aa19.92■□□□□ 0.78
CHMP4A-201ENST00000347519 NOTCH4Q99466 2003 aa19.92■□□□□ 0.78
CHMP4A-201ENST00000347519 A0A1W2PQH9 124 aa19.92■□□□□ 0.78
CHMP4A-201ENST00000347519 GRID2IPA4D2P6 1211 aa19.92■□□□□ 0.78
CHMP4A-201ENST00000347519 C2CD4BA6NLJ0 364 aa19.92■□□□□ 0.78
CHMP4A-201ENST00000347519 NRG2O14511 850 aaPredicted RBP19.92■□□□□ 0.78
CHMP4A-201ENST00000347519 GLP2RO95838 553 aa19.92■□□□□ 0.78
CHMP4A-201ENST00000347519 LRG1P02750 347 aa19.92■□□□□ 0.78
CHMP4A-201ENST00000347519 CSH1P0DML2 217 aa19.92■□□□□ 0.78
CHMP4A-201ENST00000347519 CSH2P0DML3 217 aa19.92■□□□□ 0.78
CHMP4A-201ENST00000347519 SCNN1AP37088 669 aa19.92■□□□□ 0.78
CHMP4A-201ENST00000347519 HADHBP55084 474 aaKnown RBP19.92■□□□□ 0.78
CHMP4A-201ENST00000347519 DCUN1D2Q6PH85 259 aa19.92■□□□□ 0.78
CHMP4A-201ENST00000347519 DEFB106AQ8N104 65 aa19.92■□□□□ 0.78
CHMP4A-201ENST00000347519 C12orf76Q8N812 135 aaPredicted RBP19.92■□□□□ 0.78
CHMP4A-201ENST00000347519 RXFP2Q8WXD0 754 aa19.92■□□□□ 0.78
CHMP4A-201ENST00000347519 FBXO32Q969P5 355 aa19.92■□□□□ 0.78
CHMP4A-201ENST00000347519 PSMG2Q969U7 264 aa19.92■□□□□ 0.78
CHMP4A-201ENST00000347519 FAM149B1Q96BN6 582 aa19.92■□□□□ 0.78
CHMP4A-201ENST00000347519 LRRC3Q9BY71 257 aa19.92■□□□□ 0.78
CHMP4A-201ENST00000347519 ADAM33Q9BZ11 813 aa19.92■□□□□ 0.78
CHMP4A-201ENST00000347519 FBXO44Q9H4M3 255 aa19.92■□□□□ 0.78
CHMP4A-201ENST00000347519 MRPL47Q9HD33 250 aaKnown RBP19.92■□□□□ 0.78
CHMP4A-201ENST00000347519 COMMD8Q9NX08 183 aa19.92■□□□□ 0.78
CHMP4A-201ENST00000347519 PRRC2BQ5JSZ5 2229 aaKnown RBP19.92■□□□□ 0.78
CHMP4A-201ENST00000347519 TMEM110-MUSTN1A8MSY1 372 aa19.91■□□□□ 0.78
CHMP4A-201ENST00000347519 CCP110O43303 1012 aa19.91■□□□□ 0.78
CHMP4A-201ENST00000347519 BUB1BO60566 1050 aaPredicted RBP19.91■□□□□ 0.78
CHMP4A-201ENST00000347519 TADA3O75528 432 aa19.91■□□□□ 0.78
CHMP4A-201ENST00000347519 LTFP02788 710 aa19.91■□□□□ 0.78
CHMP4A-201ENST00000347519 TFE3P19532 575 aaPredicted RBP19.91■□□□□ 0.78
CHMP4A-201ENST00000347519 YWHAGP61981 247 aaKnown RBP eCLIP19.91■□□□□ 0.78
CHMP4A-201ENST00000347519 PITX1P78337 314 aaPredicted RBP19.91■□□□□ 0.78
CHMP4A-201ENST00000347519 VEPH1Q14D04 833 aa19.91■□□□□ 0.78
CHMP4A-201ENST00000347519 RAB6CQ53S08 254 aa19.91■□□□□ 0.78
CHMP4A-201ENST00000347519 EFHC1Q5JVL4 640 aa19.91■□□□□ 0.78
CHMP4A-201ENST00000347519 SYPL2Q5VXT5 272 aa19.91■□□□□ 0.78
CHMP4A-201ENST00000347519 BSPRYQ5W0U4 402 aa19.91■□□□□ 0.78
CHMP4A-201ENST00000347519 TMC8Q8IU68 726 aa19.91■□□□□ 0.78
CHMP4A-201ENST00000347519 HDAC7Q8WUI4 952 aa19.91■□□□□ 0.78
CHMP4A-201ENST00000347519 EDEM1Q92611 657 aa19.91■□□□□ 0.78
CHMP4A-201ENST00000347519 MYRFLQ96LU7 910 aa19.91■□□□□ 0.78
CHMP4A-201ENST00000347519 SLC2A13Q96QE2 648 aa19.91■□□□□ 0.78
CHMP4A-201ENST00000347519 RAB6CQ9H0N0 254 aa19.91■□□□□ 0.78
CHMP4A-201ENST00000347519 IL21Q9HBE4 155 aa19.91■□□□□ 0.78
CHMP4A-201ENST00000347519 ASNSD1Q9NWL6 643 aa19.91■□□□□ 0.78
CHMP4A-201ENST00000347519 HCFC1R1Q9NWW0 138 aa19.91■□□□□ 0.78
CHMP4A-201ENST00000347519 NAALADL1Q9UQQ1 740 aa19.91■□□□□ 0.78
CHMP4A-201ENST00000347519 DENND4CQ5VZ89 1909 aa19.91■□□□□ 0.78
CHMP4A-201ENST00000347519 HSF2BPO75031 334 aa19.9■□□□□ 0.78
CHMP4A-201ENST00000347519 DAB1O75553 588 aa19.9■□□□□ 0.78
CHMP4A-201ENST00000347519 ZDHHC11BP0C7U3 371 aa19.9■□□□□ 0.78
CHMP4A-201ENST00000347519 NAP1L1P55209 391 aaKnown RBP19.9■□□□□ 0.78
CHMP4A-201ENST00000347519 YWHAZP63104 245 aaKnown RBP19.9■□□□□ 0.78
CHMP4A-201ENST00000347519 MESDQ14696 234 aa19.9■□□□□ 0.78
CHMP4A-201ENST00000347519 DAB2IPQ5VWQ8 1189 aa19.9■□□□□ 0.78
CHMP4A-201ENST00000347519 TMEM150AQ86TG1 271 aa19.9■□□□□ 0.78
CHMP4A-201ENST00000347519 RNF10Q8N5U6 811 aaKnown RBP19.9■□□□□ 0.78
CHMP4A-201ENST00000347519 LRRC57Q8N9N7 239 aa19.9■□□□□ 0.78
CHMP4A-201ENST00000347519 ZNF707Q96C28 371 aaPredicted RBP19.9■□□□□ 0.78
CHMP4A-201ENST00000347519 TRMT2BQ96GJ1 504 aaKnown RBP19.9■□□□□ 0.78
CHMP4A-201ENST00000347519 CDCA3Q99618 268 aaPredicted RBP19.9■□□□□ 0.78
CHMP4A-201ENST00000347519 LMCD1Q9NZU5 365 aa19.9■□□□□ 0.78
CHMP4A-201ENST00000347519 HYOU1Q9Y4L1 999 aa19.9■□□□□ 0.78
CHMP4A-201ENST00000347519 C2orf16Q68DN1 1984 aa19.89■□□□□ 0.77
CHMP4A-201ENST00000347519 GOLGA6L9A6NEM1 432 aa19.89■□□□□ 0.77
CHMP4A-201ENST00000347519 SART1O43290 800 aaKnown RBP19.89■□□□□ 0.77
CHMP4A-201ENST00000347519 PALMO75781 387 aa19.89■□□□□ 0.77
CHMP4A-201ENST00000347519 GLI1P08151 1106 aa19.89■□□□□ 0.77
CHMP4A-201ENST00000347519 GPD1P21695 349 aa19.89■□□□□ 0.77
CHMP4A-201ENST00000347519 C15orf59Q2T9L4 293 aaPredicted RBP19.89■□□□□ 0.77
CHMP4A-201ENST00000347519 CCDC14Q49A88 953 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms