RNA–Protein interactions for RNA: ENST00000347048.8

PTPA-202, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-202ENST00000347048 KRT37O76014 449 aa25.2■■□□□ 1.62
PTPA-202ENST00000347048 CDR2LQ86X02 465 aaPredicted RBP25.2■■□□□ 1.62
PTPA-202ENST00000347048 LRRC6Q86X45 466 aa25.2■■□□□ 1.62
PTPA-202ENST00000347048 LRRC39Q96DD0 335 aa25.2■■□□□ 1.62
PTPA-202ENST00000347048 PTCD3Q96EY7 689 aaKnown RBP25.2■■□□□ 1.62
PTPA-202ENST00000347048 NSL1Q96IY1 281 aa25.2■■□□□ 1.62
PTPA-202ENST00000347048 SPATA33Q96N06 139 aa25.2■■□□□ 1.62
PTPA-202ENST00000347048 FAM111AQ96PZ2 611 aa25.2■■□□□ 1.62
PTPA-202ENST00000347048 BTBD10Q9BSF8 475 aa25.2■■□□□ 1.62
PTPA-202ENST00000347048 IQCGQ9H095 443 aaKnown RBP25.2■■□□□ 1.62
PTPA-202ENST00000347048 BCLAF3A2AJT9 711 aaKnown RBP25.19■■□□□ 1.62
PTPA-202ENST00000347048 SLC25A27O95847 323 aa25.19■■□□□ 1.62
PTPA-202ENST00000347048 PYGBP11216 843 aa25.19■■□□□ 1.62
PTPA-202ENST00000347048 NEFHP12036 1026 aa25.19■■□□□ 1.62
PTPA-202ENST00000347048 SERPINB4P48594 390 aa25.19■■□□□ 1.62
PTPA-202ENST00000347048 YWHAZP63104 245 aaKnown RBP25.19■■□□□ 1.62
PTPA-202ENST00000347048 TAF11Q15544 211 aa25.19■■□□□ 1.62
PTPA-202ENST00000347048 OR6B2Q6IFH4 312 aa25.19■■□□□ 1.62
PTPA-202ENST00000347048 DHX37Q8IY37 1157 aaKnown RBP25.19■■□□□ 1.62
PTPA-202ENST00000347048 TRPM4Q8TD43 1214 aa25.19■■□□□ 1.62
PTPA-202ENST00000347048 HPDLQ96IR7 371 aa25.19■■□□□ 1.62
PTPA-202ENST00000347048 TBCBQ99426 244 aa25.19■■□□□ 1.62
PTPA-202ENST00000347048 KLC2Q9H0B6 622 aa25.19■■□□□ 1.62
PTPA-202ENST00000347048 MINDY3Q9H8M7 445 aa25.19■■□□□ 1.62
PTPA-202ENST00000347048 RAB6BQ9NRW1 208 aa25.19■■□□□ 1.62
PTPA-202ENST00000347048 MKS1Q9NXB0 559 aa25.19■■□□□ 1.62
PTPA-202ENST00000347048 TTLL3Q9Y4R7 772 aa25.19■■□□□ 1.62
PTPA-202ENST00000347048 COPEO14579 308 aa25.18■■□□□ 1.62
PTPA-202ENST00000347048 PEX10O60683 326 aa25.18■■□□□ 1.62
PTPA-202ENST00000347048 USP2O75604 605 aaPredicted RBP25.18■■□□□ 1.62
PTPA-202ENST00000347048 SNRPAP09012 282 aaKnown RBP25.18■■□□□ 1.62
PTPA-202ENST00000347048 IFNLR1Q8IU57 520 aaPredicted RBP25.18■■□□□ 1.62
PTPA-202ENST00000347048 TEX9Q8N6V9 391 aa25.18■■□□□ 1.62
PTPA-202ENST00000347048 PLD5Q8N7P1 536 aa25.18■■□□□ 1.62
PTPA-202ENST00000347048 TTC17Q96AE7 1141 aa25.18■■□□□ 1.62
PTPA-202ENST00000347048 TMEM120AQ9BXJ8 343 aa25.18■■□□□ 1.62
PTPA-202ENST00000347048 C12orf65Q9H3J6 166 aaKnown RBP25.18■■□□□ 1.62
PTPA-202ENST00000347048 DCLRE1BQ9H816 532 aa25.18■■□□□ 1.62
PTPA-202ENST00000347048 KCNK13Q9HB14 408 aa25.18■■□□□ 1.62
PTPA-202ENST00000347048 ZNF487B1APH4 448 aa25.18■■□□□ 1.62
PTPA-202ENST00000347048 APOL1O14791 398 aa25.18■■□□□ 1.62
PTPA-202ENST00000347048 C1QAP02745 245 aa25.18■■□□□ 1.62
PTPA-202ENST00000347048 GJB1P08034 283 aa25.18■■□□□ 1.62
PTPA-202ENST00000347048 DLDP09622 509 aaKnown RBP25.18■■□□□ 1.62
PTPA-202ENST00000347048 DESP17661 470 aa25.18■■□□□ 1.62
PTPA-202ENST00000347048 GM2AP17900 193 aa25.18■■□□□ 1.62
PTPA-202ENST00000347048 OSBPP22059 807 aa25.18■■□□□ 1.62
PTPA-202ENST00000347048 PRKCHP24723 683 aa25.18■■□□□ 1.62
PTPA-202ENST00000347048 CLCN3P51790 818 aa25.18■■□□□ 1.62
PTPA-202ENST00000347048 MTM1Q13496 603 aa25.18■■□□□ 1.62
PTPA-202ENST00000347048 VGLL4Q14135 290 aa25.18■■□□□ 1.62
PTPA-202ENST00000347048 FAM183BPQ6ZVS7 135 aa25.18■■□□□ 1.62
PTPA-202ENST00000347048 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP25.18■■□□□ 1.62
PTPA-202ENST00000347048 MCUQ8NE86 351 aa25.18■■□□□ 1.62
PTPA-202ENST00000347048 UBA3Q8TBC4 463 aa25.18■■□□□ 1.62
PTPA-202ENST00000347048 AFG1LQ8WV93 481 aa25.18■■□□□ 1.62
PTPA-202ENST00000347048 TRAPPC12Q8WVT3 735 aa25.18■■□□□ 1.62
PTPA-202ENST00000347048 NAF1Q96HR8 494 aaKnown RBP25.18■■□□□ 1.62
PTPA-202ENST00000347048 DENND2DQ9H6A0 471 aaPredicted RBP25.18■■□□□ 1.62
PTPA-202ENST00000347048 ITGA11Q9UKX5 1188 aa25.18■■□□□ 1.62
PTPA-202ENST00000347048 SUFUQ9UMX1 484 aa25.18■■□□□ 1.62
PTPA-202ENST00000347048 ZSWIM8A7E2V4 1837 aa25.17■■□□□ 1.62
PTPA-202ENST00000347048 KCNN4O15554 427 aa25.17■■□□□ 1.62
PTPA-202ENST00000347048 ZBTB16Q05516 673 aa25.17■■□□□ 1.62
PTPA-202ENST00000347048 SLC9A4Q6AI14 798 aa25.17■■□□□ 1.62
PTPA-202ENST00000347048 C1orf228Q6PIY5 440 aa25.17■■□□□ 1.62
PTPA-202ENST00000347048 GBA2Q9HCG7 927 aaPredicted RBP25.17■■□□□ 1.62
PTPA-202ENST00000347048 ZBED1O96006 694 aa25.16■■□□□ 1.62
PTPA-202ENST00000347048 BGNP21810 368 aa25.16■■□□□ 1.62
PTPA-202ENST00000347048 NRLP54845 237 aa25.16■■□□□ 1.62
PTPA-202ENST00000347048 TRNP1Q6NT89 227 aa25.16■■□□□ 1.62
PTPA-202ENST00000347048 C4orf50Q6ZRC1 276 aa25.16■■□□□ 1.62
PTPA-202ENST00000347048 NT5DC4Q86YG4 428 aa25.16■■□□□ 1.62
PTPA-202ENST00000347048 DDX51Q8N8A6 666 aaKnown RBP eCLIP25.16■■□□□ 1.62
PTPA-202ENST00000347048 MTBPQ96DY7 904 aa25.16■■□□□ 1.62
PTPA-202ENST00000347048 CFAP36Q96G28 342 aa25.16■■□□□ 1.62
PTPA-202ENST00000347048 SRPK1Q96SB4 655 aaKnown RBP25.16■■□□□ 1.62
PTPA-202ENST00000347048 MIPEPQ99797 713 aa25.16■■□□□ 1.62
PTPA-202ENST00000347048 POPDC2Q9HBU9 364 aa25.16■■□□□ 1.62
PTPA-202ENST00000347048 ZC3H7BQ9UGR2 993 aaKnown RBP25.16■■□□□ 1.62
PTPA-202ENST00000347048 NUMBLQ9Y6R0 609 aa25.16■■□□□ 1.62
PTPA-202ENST00000347048 TRIM49D1C9J1S8 452 aa25.16■■□□□ 1.62
PTPA-202ENST00000347048 E5RJQ4 531 aa25.16■■□□□ 1.62
PTPA-202ENST00000347048 TOMM70O94826 608 aa25.16■■□□□ 1.62
PTPA-202ENST00000347048 C22orf31O95567 290 aa25.16■■□□□ 1.62
PTPA-202ENST00000347048 CCNFP41002 786 aa25.16■■□□□ 1.62
PTPA-202ENST00000347048 NDST1P52848 882 aa25.16■■□□□ 1.62
PTPA-202ENST00000347048 BCAR1P56945 870 aa25.16■■□□□ 1.62
PTPA-202ENST00000347048 RBP5P82980 135 aa25.16■■□□□ 1.62
PTPA-202ENST00000347048 TMEM132DQ14C87 1099 aa25.16■■□□□ 1.62
PTPA-202ENST00000347048 C15orf59Q2T9L4 293 aaPredicted RBP25.16■■□□□ 1.62
PTPA-202ENST00000347048 ZNF484Q5JVG2 852 aa25.16■■□□□ 1.62
PTPA-202ENST00000347048 SH3PXD2AQ5TCZ1 1133 aa25.16■■□□□ 1.62
PTPA-202ENST00000347048 CCDC62Q6P9F0 684 aa25.16■■□□□ 1.62
PTPA-202ENST00000347048 KCNV2Q8TDN2 545 aa25.16■■□□□ 1.62
PTPA-202ENST00000347048 ZNF668Q96K58 619 aaPredicted RBP25.16■■□□□ 1.62
PTPA-202ENST00000347048 NT5C1AQ9BXI3 368 aa25.16■■□□□ 1.62
PTPA-202ENST00000347048 CADM1Q9BY67 442 aaKnown RBP25.16■■□□□ 1.62
PTPA-202ENST00000347048 MMADHCQ9H3L0 296 aaPredicted RBP25.16■■□□□ 1.62
PTPA-202ENST00000347048 IFT122Q9HBG6 1241 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms