RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 RALAP11233 206 aa21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 RARGP13631 454 aa21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 PSMC3P17980 439 aa21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 YWHAGP61981 247 aaKnown RBP eCLIP21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 PDCLQ13371 301 aa21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 GRM2Q14416 872 aa21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 FIGNQ5HY92 759 aa21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 VITQ6UXI7 678 aa21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 SCUBE3Q8IX30 993 aa21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 WDTC1Q8N5D0 677 aa21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 TMEM35BQ8NCS4 154 aa21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 ZNF397Q8NF99 534 aaPredicted RBP21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 SLC20A1Q8WUM9 679 aa21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 DDX1Q92499 740 aaKnown RBP21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 PPP1R13BQ96KQ4 1090 aa21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 EDEM3Q9BZQ6 932 aa21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 SYNCQ9H7C4 482 aa21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 OSER1Q9NX31 292 aa21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 COCHO43405 550 aa21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 ALADP13716 330 aa21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 TUBP50607 506 aa21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 CDR2Q01850 454 aa21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 SFMBT2Q5VUG0 894 aa21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 BTBD8Q5XKL5 378 aa21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 SCD5Q86SK9 330 aa21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 MFSD6LQ8IWD5 586 aa21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 GOLGA1Q92805 767 aa21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 KHSRPQ92945 711 aaKnown RBP eCLIP21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 IQCDQ96DY2 449 aa21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 TRMT61BQ9BVS5 477 aaKnown RBP21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 TTYH3Q9C0H2 523 aa21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 SMOC2Q9H3U7 446 aa21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 KIF9Q9HAQ2 790 aa21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 SEPT11Q9NVA2 429 aaKnown RBP21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 SMPD4Q9NXE4 827 aa21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 NOCTQ9UK39 431 aaKnown RBP21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 NUDT5Q9UKK9 219 aa21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.86■■□□□ 1.09
SMARCB1-202ENST00000344921 FAM170AA1A519 330 aa21.85■■□□□ 1.09
SMARCB1-202ENST00000344921 E5RJQ4 531 aa21.85■■□□□ 1.09
SMARCB1-202ENST00000344921 NARSO43776 548 aaKnown RBP21.85■■□□□ 1.09
SMARCB1-202ENST00000344921 FBXO21O94952 628 aa21.85■■□□□ 1.09
SMARCB1-202ENST00000344921 ATP5C1P36542 298 aaKnown RBP21.85■■□□□ 1.09
SMARCB1-202ENST00000344921 SNX16P57768 344 aa21.85■■□□□ 1.09
SMARCB1-202ENST00000344921 DAOAP59103 153 aa21.85■■□□□ 1.09
SMARCB1-202ENST00000344921 C10orf120Q5SQS8 335 aa21.85■■□□□ 1.09
SMARCB1-202ENST00000344921 RSRC2Q7L4I2 434 aaKnown RBP21.85■■□□□ 1.09
SMARCB1-202ENST00000344921 TADA2BQ86TJ2 420 aa21.85■■□□□ 1.09
SMARCB1-202ENST00000344921 BPIFB1Q8TDL5 484 aa21.85■■□□□ 1.09
SMARCB1-202ENST00000344921 CLEC4CQ8WTT0 213 aa21.85■■□□□ 1.09
SMARCB1-202ENST00000344921 DEPDC1BQ8WUY9 529 aa21.85■■□□□ 1.09
SMARCB1-202ENST00000344921 RSPRY1Q96DX4 576 aa21.85■■□□□ 1.09
SMARCB1-202ENST00000344921 SLC4A5Q9BY07 1137 aa21.85■■□□□ 1.09
SMARCB1-202ENST00000344921 CYLDQ9NQC7 956 aa21.85■■□□□ 1.09
SMARCB1-202ENST00000344921 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.85■■□□□ 1.09
SMARCB1-202ENST00000344921 OBP2AQ9NY56 170 aa21.85■■□□□ 1.09
SMARCB1-202ENST00000344921 DUSP12Q9UNI6 340 aa21.85■■□□□ 1.09
SMARCB1-202ENST00000344921 TTC28Q96AY4 2481 aa21.84■■□□□ 1.09
SMARCB1-202ENST00000344921 ITIH6Q6UXX5 1313 aa21.84■■□□□ 1.09
SMARCB1-202ENST00000344921 YJEFN3A6XGL0 299 aa21.84■■□□□ 1.09
SMARCB1-202ENST00000344921 E7ENQ6 273 aa21.84■■□□□ 1.09
SMARCB1-202ENST00000344921 GABBR2O75899 941 aa21.84■■□□□ 1.09
SMARCB1-202ENST00000344921 ZNF268Q14587 947 aaPredicted RBP21.84■■□□□ 1.09
SMARCB1-202ENST00000344921 ASIC2Q16515 512 aa21.84■■□□□ 1.09
SMARCB1-202ENST00000344921 UBALD2Q8IYN6 164 aa21.84■■□□□ 1.09
SMARCB1-202ENST00000344921 IPO4Q8TEX9 1081 aaKnown RBP21.84■■□□□ 1.09
SMARCB1-202ENST00000344921 CPXM1Q96SM3 734 aa21.84■■□□□ 1.09
SMARCB1-202ENST00000344921 BRD9Q9H8M2 597 aa21.84■■□□□ 1.09
SMARCB1-202ENST00000344921 THG1LQ9NWX6 298 aaKnown RBP21.84■■□□□ 1.09
SMARCB1-202ENST00000344921 CLIC5Q9NZA1 410 aa21.84■■□□□ 1.09
SMARCB1-202ENST00000344921 CPQQ9Y646 472 aa21.84■■□□□ 1.09
SMARCB1-202ENST00000344921 A0A1W2PQJ5 194 aa21.83■■□□□ 1.09
SMARCB1-202ENST00000344921 DLL1O00548 723 aa21.83■■□□□ 1.09
SMARCB1-202ENST00000344921 TBX18O95935 607 aa21.83■■□□□ 1.09
SMARCB1-202ENST00000344921 SRFP11831 508 aa21.83■■□□□ 1.09
SMARCB1-202ENST00000344921 GDI1P31150 447 aa21.83■■□□□ 1.09
SMARCB1-202ENST00000344921 RPL34P49207 117 aaKnown RBP21.83■■□□□ 1.09
SMARCB1-202ENST00000344921 GPC5P78333 572 aa21.83■■□□□ 1.09
SMARCB1-202ENST00000344921 SLC7A9P82251 487 aa21.83■■□□□ 1.09
SMARCB1-202ENST00000344921 SPECC1LQ69YQ0 1117 aa21.83■■□□□ 1.09
SMARCB1-202ENST00000344921 CC2D1AQ6P1N0 951 aaPredicted RBP21.83■■□□□ 1.09
SMARCB1-202ENST00000344921 SARM1Q6SZW1 724 aa21.83■■□□□ 1.09
SMARCB1-202ENST00000344921 TMEM110Q86TL2 294 aa21.83■■□□□ 1.09
SMARCB1-202ENST00000344921 SCML4Q8N228 414 aa21.83■■□□□ 1.09
SMARCB1-202ENST00000344921 SH3RF2Q8TEC5 729 aa21.83■■□□□ 1.09
SMARCB1-202ENST00000344921 IRGQQ8WZA9 623 aa21.83■■□□□ 1.09
SMARCB1-202ENST00000344921 CDK5RAP1Q96SZ6 601 aaKnown RBP21.83■■□□□ 1.09
SMARCB1-202ENST00000344921 ARHGAP26Q9UNA1 814 aa21.83■■□□□ 1.09
SMARCB1-202ENST00000344921 LUC7L2Q9Y383 392 aaKnown RBP21.83■■□□□ 1.09
SMARCB1-202ENST00000344921 LSM8O95777 96 aaKnown RBP21.83■■□□□ 1.08
SMARCB1-202ENST00000344921 OLFM2O95897 454 aa21.83■■□□□ 1.08
SMARCB1-202ENST00000344921 ZXDAP98168 799 aa21.83■■□□□ 1.08
SMARCB1-202ENST00000344921 FMO1Q01740 532 aa21.83■■□□□ 1.08
SMARCB1-202ENST00000344921 BSPRYQ5W0U4 402 aa21.83■■□□□ 1.08
SMARCB1-202ENST00000344921 IRF2BP2Q7Z5L9 587 aa21.83■■□□□ 1.08
SMARCB1-202ENST00000344921 RNF139Q8WU17 664 aa21.83■■□□□ 1.08
SMARCB1-202ENST00000344921 CPA5Q8WXQ8 436 aa21.83■■□□□ 1.08
SMARCB1-202ENST00000344921 FAM149B1Q96BN6 582 aa21.83■■□□□ 1.08
SMARCB1-202ENST00000344921 LRRC3BQ96PB8 259 aa21.83■■□□□ 1.08
SMARCB1-202ENST00000344921 NUCKS1Q9H1E3 243 aaKnown RBP21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms