RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 TADA2AO75478 443 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 PSMG1O95456 288 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 VDRP11473 427 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 MARCKSL1P49006 195 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 COPAP53621 1224 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 TAF1CQ15572 869 aaPredicted RBP8.34□□□□□ -1.07
UBE4B-202ENST00000343090 DGKDQ16760 1214 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 SPDYAQ5MJ70 313 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 GPRC5AQ8NFJ5 357 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 LNX1Q8TBB1 728 aaPredicted RBP8.34□□□□□ -1.07
UBE4B-202ENST00000343090 CYGBQ8WWM9 190 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 BAP1Q92560 729 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 PBXIP1Q96AQ6 731 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 LENG1Q96BZ8 264 aaPredicted RBP8.34□□□□□ -1.07
UBE4B-202ENST00000343090 ZBED2Q9BTP6 218 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 UTP6Q9NYH9 597 aaKnown RBP8.34□□□□□ -1.07
UBE4B-202ENST00000343090 SAE1Q9UBE0 346 aaPredicted RBP8.34□□□□□ -1.07
UBE4B-202ENST00000343090 PCDHA3Q9Y5H8 950 aa8.34□□□□□ -1.07
UBE4B-202ENST00000343090 RPL10AP62906 217 aaKnown RBP8.33□□□□□ -1.08
UBE4B-202ENST00000343090 CXCL9Q07325 125 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 SLC15A2Q16348 729 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 PKN2Q16513 984 aaKnown RBP8.33□□□□□ -1.08
UBE4B-202ENST00000343090 C16orf89Q6UX73 402 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 PTF1AQ7RTS3 328 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 INPP5DQ92835 1189 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 FAM84AQ96KN4 292 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 BTBD10Q9BSF8 475 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 KIAA1683Q9H0B3 1180 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 KCTD10Q9H3F6 313 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 DNAJC16Q9Y2G8 782 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 CDY2AQ9Y6F7 541 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 CDY1Q9Y6F8 540 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 ASTN1O14525 1302 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 CCL15-CCL14A0A0B4J2E2 113 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 NDUFS3O75489 264 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 WFS1O76024 890 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 ZNF286BP0CG31 522 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 ETS1P14921 441 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 HMOX2P30519 316 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 ELK3P41970 407 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 PTPN11Q06124 597 aaPredicted RBP8.33□□□□□ -1.08
UBE4B-202ENST00000343090 LAMC2Q13753 1193 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 CCL15Q16663 113 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 C1orf186Q6ZWK4 172 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 CCDC80Q76M96 950 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 WDR49Q8IV35 697 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.33□□□□□ -1.086e-7■■■■■ 139.2
UBE4B-202ENST00000343090 TMEM176AQ96HP8 235 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 ZNF570Q96NI8 536 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 MMTAG2Q9BU76 263 aaKnown RBP8.33□□□□□ -1.08
UBE4B-202ENST00000343090 TBC1D10AQ9BXI6 508 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 KLHL4Q9C0H6 718 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 KCNMB3Q9NPA1 279 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 RNF19AQ9NV58 838 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 NMRK1Q9NWW6 199 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 TPST1O60507 370 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 KRT36O76013 467 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 SRP72O76094 671 aaKnown RBP8.33□□□□□ -1.08
UBE4B-202ENST00000343090 YY1P25490 414 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 ATICP31939 592 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 VCPP55072 806 aaKnown RBP8.33□□□□□ -1.08
UBE4B-202ENST00000343090 NME5P56597 212 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 PPIDQ08752 370 aaKnown RBP8.33□□□□□ -1.08
UBE4B-202ENST00000343090 DMPKQ09013 629 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 SGO1Q5FBB7 561 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 MAML3Q96JK9 1138 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 TRIM62Q9BVG3 475 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 FGFBP2Q9BYJ0 223 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 GANQ9H2C0 597 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 WDCPQ9H6R7 721 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 EBF2Q9HAK2 575 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 IARS2Q9NSE4 1012 aaKnown RBP8.33□□□□□ -1.08
UBE4B-202ENST00000343090 AP4E1Q9UPM8 1137 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 SH3BP1Q9Y3L3 701 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 DCDC2CA8MYV0 355 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 MEIS2O14770 477 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 PLIN5Q00G26 463 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 TBL3Q12788 808 aaKnown RBP8.33□□□□□ -1.08
UBE4B-202ENST00000343090 DCTN2Q13561 401 aaKnown RBP8.33□□□□□ -1.08
UBE4B-202ENST00000343090 FLOT2Q14254 428 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 SHROOM1Q2M3G4 852 aaPredicted RBP8.33□□□□□ -1.08
UBE4B-202ENST00000343090 IYDQ6PHW0 289 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 ISLR2Q6UXK2 745 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 BHMTQ93088 406 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 WDR18Q9BV38 432 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 CYP4F12Q9HCS2 524 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 GID8Q9NWU2 228 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 CLIC5Q9NZA1 410 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 ZNF212Q9UDV6 495 aa8.33□□□□□ -1.08
UBE4B-202ENST00000343090 OR1G1P47890 313 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 FUT2Q10981 343 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 INPP5AQ14642 412 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 C16orf72Q14CZ0 275 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 RASA2Q15283 850 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 MGAT5BQ3V5L5 792 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 ZNF662Q6ZS27 426 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 PATL1Q86TB9 770 aaKnown RBP8.32□□□□□ -1.08
UBE4B-202ENST00000343090 IRF2BP1Q8IU81 584 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 CERS5Q8N5B7 392 aa8.32□□□□□ -1.08
UBE4B-202ENST00000343090 HASPINQ8TF76 798 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms