RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 RBM44Q6ZP01 1051 aaKnown RBP10.04□□□□□ -0.8
HOXA1-201ENST00000343060 TMEM126BQ8IUX1 230 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 NUDCD3Q8IVD9 361 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 AHI1Q8N157 1196 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 METTL25Q8N6Q8 603 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 ICA1LQ8NDH6 482 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 SLC26A7Q8TE54 656 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 DIS3LQ8TF46 1054 aaKnown RBP10.04□□□□□ -0.8
HOXA1-201ENST00000343060 FAM213AQ9BRX8 229 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 FRMD8Q9BZ67 464 aaPredicted RBP10.04□□□□□ -0.8
HOXA1-201ENST00000343060 ZNF395Q9H8N7 513 aaPredicted RBP10.04□□□□□ -0.8
HOXA1-201ENST00000343060 PLAC1Q9HBJ0 212 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 XAB2Q9HCS7 855 aaKnown RBP10.04□□□□□ -0.8
HOXA1-201ENST00000343060 KMT5AQ9NQR1 393 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 APOC4-APOC2K7ER74 178 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 TRDMT1O14717 391 aaKnown RBP10.04□□□□□ -0.8
HOXA1-201ENST00000343060 CST8O60676 142 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 GH2P01242 217 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 APOC2P02655 101 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 CDK4P11802 303 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 GYS1P13807 737 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 CPA3P15088 417 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 RAG1P15918 1043 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 ALOX15P16050 662 aaPredicted RBP10.04□□□□□ -0.8
HOXA1-201ENST00000343060 WNT7BP56706 349 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 YWHAGP61981 247 aaKnown RBP eCLIP10.04□□□□□ -0.8
HOXA1-201ENST00000343060 GHRHRQ02643 423 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 STXBP5Q5T5C0 1151 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 C1orf228Q6PIY5 440 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 SP8Q8IXZ3 490 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 GAB3Q8WWW8 586 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 KCNN1Q92952 543 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 AGBL1Q96MI9 1066 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 ZNF778Q96MU6 729 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 NRDE2Q9H7Z3 1164 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 C10orf88Q9H8K7 445 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 POPDC2Q9HBU9 364 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 C6orf203Q9P0P8 240 aaPredicted RBP10.04□□□□□ -0.8
HOXA1-201ENST00000343060 SAE1Q9UBE0 346 aaPredicted RBP10.04□□□□□ -0.8
HOXA1-201ENST00000343060 RAB26Q9ULW5 256 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 PADI4Q9UM07 663 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 POMPQ9Y244 141 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 DTNAQ9Y4J8 743 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 SIP14410 1827 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 PTPRJQ12913 1337 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 CCDC195A0A1B0GUA6 201 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 KLRG2A4D1S0 409 aaPredicted RBP10.03□□□□□ -0.8
HOXA1-201ENST00000343060 ARHGAP42A6NI28 874 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 PGM3O95394 542 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 CLPTM1O96005 669 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 KRT7P08729 469 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 FAM163BP0C2L3 166 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 ACAT1P24752 427 aaKnown RBP10.03□□□□□ -0.8
HOXA1-201ENST00000343060 PRDX6P30041 224 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 HSPA2P54652 639 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 YWHAZP63104 245 aaKnown RBP10.03□□□□□ -0.8
HOXA1-201ENST00000343060 BASP1P80723 227 aaKnown RBP10.03□□□□□ -0.8
HOXA1-201ENST00000343060 TCP10Q12799 353 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 STX3Q13277 289 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 LRRC36Q1X8D7 754 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 TKFCQ3LXA3 575 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 NADK2Q4G0N4 442 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 RALGPS1Q5JS13 557 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 LGSNQ5TDP6 509 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 SMYD5Q6GMV2 418 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 DCUN1D2Q6PH85 259 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 TIFABQ6ZNK6 161 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 TAS1R3Q7RTX0 852 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 TICAM1Q8IUC6 712 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 ZNF606Q8WXB4 792 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 RILPQ96NA2 401 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 ZNF518BQ9C0D4 1074 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 MARCOQ9UEW3 520 aaPredicted RBP10.03□□□□□ -0.8
HOXA1-201ENST00000343060 AGTPBP1Q9UPW5 1226 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 TELO2Q9Y4R8 837 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 PCDHGA4Q9Y5G9 962 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 STYXL1Q9Y6J8 313 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 CXorf49A8MYA2 514 aaPredicted RBP10.03□□□□□ -0.8
HOXA1-201ENST00000343060 CYB561D2O14569 222 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 HNRNPDLO14979 420 aaKnown RBP10.03□□□□□ -0.8
HOXA1-201ENST00000343060 DNAJA2O60884 412 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 GSRP00390 522 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 ITGAXP20702 1163 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 KDELR1P24390 212 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 SSTR3P32745 418 aaPredicted RBP10.03□□□□□ -0.8
HOXA1-201ENST00000343060 MAGEA6P43360 314 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 HIRAP54198 1017 aaPredicted RBP10.03□□□□□ -0.8
HOXA1-201ENST00000343060 CACNB3P54284 484 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 CNTN2Q02246 1040 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 DEUP1Q05D60 604 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 HSP90AA5PQ58FG0 334 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 XKR9Q5GH70 373 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 WDR78Q5VTH9 848 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 ANO5Q75V66 913 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 PTF1AQ7RTS3 328 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 ARFGAP1Q8N6T3 406 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 FAM71DQ8N9W8 422 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 IL31RAQ8NI17 732 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 FNIP1Q8TF40 1166 aa10.03□□□□□ -0.8
HOXA1-201ENST00000343060 DCUN1D1Q96GG9 259 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms