RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 SKA1Q96BD8 255 aa15.49■□□□□ 0.07
UBE3B-202ENST00000342494 FAM167BQ9BTA0 163 aa15.49■□□□□ 0.07
UBE3B-202ENST00000342494 MFSD1Q9H3U5 465 aa15.49■□□□□ 0.07
UBE3B-202ENST00000342494 BLOC1S6Q9UL45 172 aa15.49■□□□□ 0.07
UBE3B-202ENST00000342494 USP18Q9UMW8 372 aa15.49■□□□□ 0.07
UBE3B-202ENST00000342494 USP15Q9Y4E8 981 aaPredicted RBP15.49■□□□□ 0.07
UBE3B-202ENST00000342494 SPTLC1O15269 473 aa15.49■□□□□ 0.07
UBE3B-202ENST00000342494 GUCA1AP43080 201 aaPredicted RBP15.49■□□□□ 0.07
UBE3B-202ENST00000342494 ERVK-9P63128 1117 aa15.49■□□□□ 0.07
UBE3B-202ENST00000342494 ERVK-24P63145 666 aa15.49■□□□□ 0.07
UBE3B-202ENST00000342494 MANSC1Q9H8J5 431 aa15.49■□□□□ 0.07
UBE3B-202ENST00000342494 ZCCHC17Q9NP64 241 aaKnown RBP15.49■□□□□ 0.07
UBE3B-202ENST00000342494 FBXO10Q9UK96 956 aa15.49■□□□□ 0.07
UBE3B-202ENST00000342494 CEP152O94986 1710 aa15.49■□□□□ 0.07
UBE3B-202ENST00000342494 TIMM44O43615 452 aa15.49■□□□□ 0.07
UBE3B-202ENST00000342494 NDUFB5O43674 189 aa15.49■□□□□ 0.07
UBE3B-202ENST00000342494 TCF3P15923 654 aa15.49■□□□□ 0.07
UBE3B-202ENST00000342494 MAPK1P28482 360 aa15.49■□□□□ 0.07
UBE3B-202ENST00000342494 TBX4P57082 545 aa15.49■□□□□ 0.07
UBE3B-202ENST00000342494 TGM3Q08188 693 aa15.49■□□□□ 0.07
UBE3B-202ENST00000342494 SLC9A5Q14940 896 aa15.49■□□□□ 0.07
UBE3B-202ENST00000342494 SLC30A10Q6XR72 485 aa15.49■□□□□ 0.07
UBE3B-202ENST00000342494 DDX42Q86XP3 938 aaKnown RBP eCLIP15.49■□□□□ 0.07
UBE3B-202ENST00000342494 SLC44A2Q8IWA5 706 aaPredicted RBP15.49■□□□□ 0.07
UBE3B-202ENST00000342494 CYGBQ8WWM9 190 aa15.49■□□□□ 0.07
UBE3B-202ENST00000342494 EDEM1Q92611 657 aa15.49■□□□□ 0.07
UBE3B-202ENST00000342494 APOL2Q9BQE5 337 aa15.49■□□□□ 0.07
UBE3B-202ENST00000342494 V9GYQ6 96 aa15.49■□□□□ 0.07
UBE3B-202ENST00000342494 PTPRMP28827 1452 aa15.49■□□□□ 0.07
UBE3B-202ENST00000342494 FAM47E-STBD1D6RA91 191 aa15.49■□□□□ 0.07
UBE3B-202ENST00000342494 LSM8O95777 96 aaKnown RBP15.49■□□□□ 0.07
UBE3B-202ENST00000342494 ACAT1P24752 427 aaKnown RBP15.49■□□□□ 0.07
UBE3B-202ENST00000342494 TERF2Q15554 542 aa15.49■□□□□ 0.07
UBE3B-202ENST00000342494 LRRC6Q86X45 466 aa15.49■□□□□ 0.07
UBE3B-202ENST00000342494 RXFP2Q8WXD0 754 aa15.49■□□□□ 0.07
UBE3B-202ENST00000342494 PAWRQ96IZ0 340 aaKnown RBP15.49■□□□□ 0.07
UBE3B-202ENST00000342494 IARS2Q9NSE4 1012 aaKnown RBP15.49■□□□□ 0.07
UBE3B-202ENST00000342494 FGFR2P21802 821 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 CHI3L1P36222 383 aaPredicted RBP15.48■□□□□ 0.07
UBE3B-202ENST00000342494 MAGEA9P43362 315 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 SERPINB10P48595 397 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 UBE3AQ05086 875 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 CCNI2Q6ZMN8 369 aaPredicted RBP15.48■□□□□ 0.07
UBE3B-202ENST00000342494 DTX3LQ8TDB6 740 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 SLC20A1Q8WUM9 679 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 CCDC126Q96EE4 140 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 VMP1Q96GC9 406 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 TRPV2Q9Y5S1 764 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 PDZK1P1A8MUH7 402 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 ZBTB39O15060 712 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 TSPAN3O60637 253 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 NAA30Q147X3 362 aaPredicted RBP15.48■□□□□ 0.07
UBE3B-202ENST00000342494 THTPAQ9BU02 230 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 SHCBP1LQ9BZQ2 653 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 SENP6Q9GZR1 1112 aaPredicted RBP15.48■□□□□ 0.07
UBE3B-202ENST00000342494 ILKAPQ9H0C8 392 aaPredicted RBP15.48■□□□□ 0.07
UBE3B-202ENST00000342494 RUVBL2Q9Y230 463 aaKnown RBP15.48■□□□□ 0.07
UBE3B-202ENST00000342494 LOC100653049A0A140TA62 436 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 PLA2G6O60733 806 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 KRT34O76011 436 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 GLP2RO95838 553 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 AXLP30530 894 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 SHMT1P34896 483 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 RENBPP51606 427 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 OTUD4Q01804 1114 aaKnown RBP15.48■□□□□ 0.07
UBE3B-202ENST00000342494 ILDR2Q71H61 639 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 ZNF333Q96JL9 665 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 UTP6Q9NYH9 597 aaKnown RBP15.48■□□□□ 0.07
UBE3B-202ENST00000342494 MADDQ8WXG6 1647 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 MYO1CO00159 1063 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 SKAP2O75563 359 aaPredicted RBP15.48■□□□□ 0.07
UBE3B-202ENST00000342494 APOA1P02647 267 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 MAPK9P45984 424 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 SERPINB8P50452 374 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 CCZ1BP86790 482 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 CCZ1P86791 482 aaPredicted RBP15.48■□□□□ 0.07
UBE3B-202ENST00000342494 IKBKEQ14164 716 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 E2F4Q16254 413 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 AGBL2Q5U5Z8 902 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 EMC1Q8N766 993 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 LPCAT1Q8NF37 534 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 OSBPL1AQ9BXW6 950 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 RIOX1Q9H6W3 641 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 BARX2Q9UMQ3 279 aaPredicted RBP15.48■□□□□ 0.07
UBE3B-202ENST00000342494 SNCAIPQ9Y6H5 919 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 FGFR1P11362 822 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 P3H2Q8IVL5 708 aa15.48■□□□□ 0.07
UBE3B-202ENST00000342494 UXTQ9UBK9 157 aaPredicted RBP15.48■□□□□ 0.07
UBE3B-202ENST00000342494 CPS1P31327 1500 aa15.47■□□□□ 0.07
UBE3B-202ENST00000342494 GLRA3O75311 464 aa15.47■□□□□ 0.07
UBE3B-202ENST00000342494 YWHAQP27348 245 aa15.47■□□□□ 0.07
UBE3B-202ENST00000342494 ALDH6A1Q02252 535 aaKnown RBP15.47■□□□□ 0.07
UBE3B-202ENST00000342494 GALNTL6Q49A17 601 aa15.47■□□□□ 0.07
UBE3B-202ENST00000342494 MARC1Q5VT66 337 aa15.47■□□□□ 0.07
UBE3B-202ENST00000342494 NT5DC3Q86UY8 548 aa15.47■□□□□ 0.07
UBE3B-202ENST00000342494 ISCUQ9H1K1 167 aa15.47■□□□□ 0.07
UBE3B-202ENST00000342494 RAMP2O60895 175 aa15.47■□□□□ 0.07
UBE3B-202ENST00000342494 MTA1Q13330 715 aa15.47■□□□□ 0.07
UBE3B-202ENST00000342494 PWP1Q13610 501 aa15.47■□□□□ 0.07
UBE3B-202ENST00000342494 LRRC36Q1X8D7 754 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms