RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 GABPB2Q8TAK5 448 aaPredicted RBP12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 APOPT1Q96IL0 206 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 DNAJC5Q9H3Z4 198 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 PPCSQ9HAB8 311 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 NKX1-2Q9UD57 310 aaPredicted RBP12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 TAGLN3Q9UI15 199 aa12.88□□□□□ -0.35
SNRNP48-201ENST00000342415 MYH7P12883 1935 aa12.87□□□□□ -0.35
SNRNP48-201ENST00000342415 WDR27A2RRH5 827 aa12.87□□□□□ -0.35
SNRNP48-201ENST00000342415 DCAF8L1A6NGE4 600 aa12.87□□□□□ -0.35
SNRNP48-201ENST00000342415 E5RJQ4 531 aa12.87□□□□□ -0.35
SNRNP48-201ENST00000342415 MYCP01106 439 aaPredicted RBP12.87□□□□□ -0.35
SNRNP48-201ENST00000342415 CETPP11597 493 aa12.87□□□□□ -0.35
SNRNP48-201ENST00000342415 GPR162Q16538 588 aa12.87□□□□□ -0.35
SNRNP48-201ENST00000342415 CRY2Q49AN0 593 aa12.87□□□□□ -0.35
SNRNP48-201ENST00000342415 BOLA3Q53S33 107 aa12.87□□□□□ -0.35
SNRNP48-201ENST00000342415 DDX18Q9NVP1 670 aaKnown RBP12.87□□□□□ -0.35
SNRNP48-201ENST00000342415 NMRK1Q9NWW6 199 aa12.87□□□□□ -0.35
SNRNP48-201ENST00000342415 HACL1Q9UJ83 578 aa12.87□□□□□ -0.35
SNRNP48-201ENST00000342415 hCG_1818297A0A087WSY0 165 aa12.87□□□□□ -0.35
SNRNP48-201ENST00000342415 TCRBV9S1A1TA0A576 114 aa12.87□□□□□ -0.35
SNRNP48-201ENST00000342415 VWA5AO00534 786 aa12.87□□□□□ -0.35
SNRNP48-201ENST00000342415 LYPLA1O75608 230 aaPredicted RBP12.87□□□□□ -0.35
SNRNP48-201ENST00000342415 KLHL2O95198 593 aa12.87□□□□□ -0.35
SNRNP48-201ENST00000342415 TAF5Q15542 800 aa12.87□□□□□ -0.35
SNRNP48-201ENST00000342415 PCSK7Q16549 785 aa12.87□□□□□ -0.35
SNRNP48-201ENST00000342415 FNBP1LQ5T0N5 605 aa12.87□□□□□ -0.35
SNRNP48-201ENST00000342415 DPY19L2Q6NUT2 758 aa12.87□□□□□ -0.35
SNRNP48-201ENST00000342415 ATP6V1E2Q96A05 226 aa12.87□□□□□ -0.35
SNRNP48-201ENST00000342415 GCNAQ96QF7 691 aa12.87□□□□□ -0.35
SNRNP48-201ENST00000342415 UPF3AQ9H1J1 476 aaKnown RBP12.87□□□□□ -0.35
SNRNP48-201ENST00000342415 CAAP1Q9H8G2 361 aa12.87□□□□□ -0.35
SNRNP48-201ENST00000342415 SRCAPQ6ZRS2 3230 aa12.87□□□□□ -0.35
SNRNP48-201ENST00000342415 PGM3O95394 542 aa12.87□□□□□ -0.35
SNRNP48-201ENST00000342415 AMPD1P23109 780 aa12.87□□□□□ -0.35
SNRNP48-201ENST00000342415 NME5P56597 212 aa12.87□□□□□ -0.35
SNRNP48-201ENST00000342415 TAF12Q16514 161 aa12.87□□□□□ -0.35
SNRNP48-201ENST00000342415 CYP4F12Q9HCS2 524 aa12.87□□□□□ -0.35
SNRNP48-201ENST00000342415 TSPAN16Q9UKR8 245 aa12.87□□□□□ -0.35
SNRNP48-201ENST00000342415 ZMYND8Q9ULU4 1186 aaPredicted RBP12.87□□□□□ -0.35
SNRNP48-201ENST00000342415 SLC12A4Q9UP95 1085 aa12.87□□□□□ -0.35
SNRNP48-201ENST00000342415 SPAG6O75602 509 aa12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 POLBP06746 335 aa12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 NDST1P52848 882 aa12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 LAMTOR4Q0VGL1 99 aa12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 ZC3H12AQ5D1E8 599 aaKnown RBP12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 ADAM32Q8TC27 787 aa12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 INPP5DQ92835 1189 aa12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 CNPY3Q9BT09 278 aa12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 BCL9LQ86UU0 1499 aa12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 LAMA4Q16363 1823 aa12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 A0A087WZ62 844 aa12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 PEX1O43933 1283 aa12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 ZNF862O60290 1169 aa12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 STAG3L1P0CL83 205 aa12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 RALBP11234 206 aa12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 IER5Q5VY09 327 aa12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 BEST2Q8NFU1 509 aa12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 OLFM3Q96PB7 478 aa12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 ZNF184Q99676 751 aaPredicted RBP12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 FDXACB1Q9BRP7 624 aaPredicted RBP12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 A1CFQ9NQ94 594 aaKnown RBP12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 ARHGAP26Q9UNA1 814 aa12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 DTNAQ9Y4J8 743 aa12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 NR2E3Q9Y5X4 410 aa12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 ZMYM2Q9UBW7 1377 aa12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 ALOX15BO15296 676 aa12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 HNRNPCP07910 306 aaKnown RBP eCLIP12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 TFE3P19532 575 aaPredicted RBP12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 GMPSP49915 693 aaPredicted RBP12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 GDF10P55107 478 aa12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 BACE1P56817 501 aa12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 TNFAIP2Q03169 654 aa12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 EFHC1Q5JVL4 640 aa12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 VSIG10LQ86VR7 867 aa12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 SIAH1Q8IUQ4 282 aa12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 ZDHHC14Q8IZN3 488 aa12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 C12orf29Q8N999 325 aa12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 SLC7A14Q8TBB6 771 aa12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 TMEM176AQ96HP8 235 aa12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 VCPIP1Q96JH7 1222 aa12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 KCNK16Q96T55 309 aa12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 ELP3Q9H9T3 547 aa12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 STAP1Q9ULZ2 295 aa12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 UBIAD1Q9Y5Z9 338 aa12.86□□□□□ -0.35
SNRNP48-201ENST00000342415 M0QZ92 97 aa12.85□□□□□ -0.35
SNRNP48-201ENST00000342415 SERPINB9P50453 376 aa12.85□□□□□ -0.35
SNRNP48-201ENST00000342415 GTF2A2P52657 109 aa12.85□□□□□ -0.35
SNRNP48-201ENST00000342415 PKNOX1P55347 436 aa12.85□□□□□ -0.35
SNRNP48-201ENST00000342415 TPI1P60174 286 aa12.85□□□□□ -0.35
SNRNP48-201ENST00000342415 PHEXP78562 749 aa12.85□□□□□ -0.35
SNRNP48-201ENST00000342415 SCN4BQ8IWT1 228 aa12.85□□□□□ -0.35
SNRNP48-201ENST00000342415 NUP93Q8N1F7 819 aa12.85□□□□□ -0.35
SNRNP48-201ENST00000342415 GSTCDQ8NEC7 633 aa12.85□□□□□ -0.35
SNRNP48-201ENST00000342415 CXorf38Q8TB03 319 aa12.85□□□□□ -0.35
SNRNP48-201ENST00000342415 CERKQ8TCT0 537 aa12.85□□□□□ -0.35
SNRNP48-201ENST00000342415 ZNF395Q9H8N7 513 aaPredicted RBP12.85□□□□□ -0.35
SNRNP48-201ENST00000342415 PRR5-ARHGAP8B1AHC4 643 aa12.85□□□□□ -0.35
SNRNP48-201ENST00000342415 FDX1P10109 184 aa12.85□□□□□ -0.35
SNRNP48-201ENST00000342415 TGM2P21980 687 aa12.85□□□□□ -0.35
SNRNP48-201ENST00000342415 PMLP29590 882 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms