RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 ANKDD1AQ495B1 522 aa19.2■□□□□ 0.66
SMPD1-201ENST00000342245 ZBED5Q49AG3 693 aa19.2■□□□□ 0.66
SMPD1-201ENST00000342245 PARP10Q53GL7 1025 aa19.2■□□□□ 0.66
SMPD1-201ENST00000342245 C6orf52Q5T4I8 152 aa19.2■□□□□ 0.66
SMPD1-201ENST00000342245 ZNF720Q7Z2F6 126 aa19.2■□□□□ 0.66
SMPD1-201ENST00000342245 CHERPQ8IWX8 916 aaKnown RBP19.2■□□□□ 0.66
SMPD1-201ENST00000342245 FBXO36Q8NEA4 188 aa19.2■□□□□ 0.66
SMPD1-201ENST00000342245 ZNF420Q8TAQ5 688 aaPredicted RBP19.2■□□□□ 0.66
SMPD1-201ENST00000342245 NAV1Q8NEY1 1877 aa19.2■□□□□ 0.66
SMPD1-201ENST00000342245 H3BNH8 94 aa19.19■□□□□ 0.66
SMPD1-201ENST00000342245 K7EPI3 171 aa19.19■□□□□ 0.66
SMPD1-201ENST00000342245 LDHAP00338 332 aaKnown RBP19.19■□□□□ 0.66
SMPD1-201ENST00000342245 ZSCAN5DPP0CG00 497 aa19.19■□□□□ 0.66
SMPD1-201ENST00000342245 CCT8P50990 548 aa19.19■□□□□ 0.66
SMPD1-201ENST00000342245 STX3Q13277 289 aa19.19■□□□□ 0.66
SMPD1-201ENST00000342245 TCHHL1Q5QJ38 904 aaPredicted RBP19.19■□□□□ 0.66
SMPD1-201ENST00000342245 KRT39Q6A163 491 aa19.19■□□□□ 0.66
SMPD1-201ENST00000342245 RINT1Q6NUQ1 792 aa19.19■□□□□ 0.66
SMPD1-201ENST00000342245 IQCF2Q8IXL9 164 aa19.19■□□□□ 0.66
SMPD1-201ENST00000342245 MCOLN2Q8IZK6 566 aa19.19■□□□□ 0.66
SMPD1-201ENST00000342245 PDIK1LQ8N165 341 aa19.19■□□□□ 0.66
SMPD1-201ENST00000342245 GLIS1Q8NBF1 620 aa19.19■□□□□ 0.66
SMPD1-201ENST00000342245 SHKBP1Q8TBC3 707 aa19.19■□□□□ 0.66
SMPD1-201ENST00000342245 CCDC138Q96M89 665 aa19.19■□□□□ 0.66
SMPD1-201ENST00000342245 LIN28AQ9H9Z2 209 aaKnown RBP19.19■□□□□ 0.66
SMPD1-201ENST00000342245 PNPLA3Q9NST1 481 aa19.19■□□□□ 0.66
SMPD1-201ENST00000342245 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.19■□□□□ 0.66
SMPD1-201ENST00000342245 TAF1LQ8IZX4 1826 aa19.19■□□□□ 0.66
SMPD1-201ENST00000342245 XPOTO43592 962 aaKnown RBP19.19■□□□□ 0.66
SMPD1-201ENST00000342245 KRT37O76014 449 aa19.19■□□□□ 0.66
SMPD1-201ENST00000342245 ZBTB11O95625 1053 aaPredicted RBP19.19■□□□□ 0.66
SMPD1-201ENST00000342245 TRPC3Q13507 836 aa19.19■□□□□ 0.66
SMPD1-201ENST00000342245 COG2Q14746 738 aa19.19■□□□□ 0.66
SMPD1-201ENST00000342245 MOGQ16653 247 aa19.19■□□□□ 0.66
SMPD1-201ENST00000342245 RGS21Q2M5E4 152 aa19.19■□□□□ 0.66
SMPD1-201ENST00000342245 PAOXQ6QHF9 649 aa19.19■□□□□ 0.66
SMPD1-201ENST00000342245 DZIP1Q86YF9 867 aaKnown RBP19.19■□□□□ 0.66
SMPD1-201ENST00000342245 RHPN2Q8IUC4 686 aa19.19■□□□□ 0.66
SMPD1-201ENST00000342245 ISOC1Q96CN7 298 aa19.19■□□□□ 0.66
SMPD1-201ENST00000342245 NSMCE3Q96MG7 304 aa19.19■□□□□ 0.66
SMPD1-201ENST00000342245 FAM20AQ96MK3 541 aa19.19■□□□□ 0.66
SMPD1-201ENST00000342245 TMEM117Q9H0C3 514 aa19.19■□□□□ 0.66
SMPD1-201ENST00000342245 RAB20Q9NX57 234 aa19.19■□□□□ 0.66
SMPD1-201ENST00000342245 SLC8A2Q9UPR5 921 aa19.19■□□□□ 0.66
SMPD1-201ENST00000342245 TTLL3Q9Y4R7 772 aa19.19■□□□□ 0.66
SMPD1-201ENST00000342245 AP4S1Q9Y587 144 aa19.19■□□□□ 0.66
SMPD1-201ENST00000342245 HEMK1Q9Y5R4 338 aaPredicted RBP19.19■□□□□ 0.66
SMPD1-201ENST00000342245 A0A0B4J269 797 aa19.18■□□□□ 0.66
SMPD1-201ENST00000342245 SULT1C4O75897 302 aa19.18■□□□□ 0.66
SMPD1-201ENST00000342245 TFPTP0C1Z6 253 aa19.18■□□□□ 0.66
SMPD1-201ENST00000342245 KITP10721 976 aa19.18■□□□□ 0.66
SMPD1-201ENST00000342245 FAAP100Q0VG06 881 aa19.18■□□□□ 0.66
SMPD1-201ENST00000342245 TUBB3Q13509 450 aa19.18■□□□□ 0.66
SMPD1-201ENST00000342245 DPYSQ14117 519 aa19.18■□□□□ 0.66
SMPD1-201ENST00000342245 METTL21CQ5VZV1 264 aa19.18■□□□□ 0.66
SMPD1-201ENST00000342245 ITPRIPL1Q6GPH6 555 aa19.18■□□□□ 0.66
SMPD1-201ENST00000342245 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.18■□□□□ 0.66
SMPD1-201ENST00000342245 GSDMBQ8TAX9 411 aa19.18■□□□□ 0.66
SMPD1-201ENST00000342245 OSBPL11Q9BXB4 747 aa19.18■□□□□ 0.66
SMPD1-201ENST00000342245 TDRD1Q9BXT4 1180 aaKnown RBP19.18■□□□□ 0.66
SMPD1-201ENST00000342245 SIN3BO75182 1162 aa19.18■□□□□ 0.66
SMPD1-201ENST00000342245 PTPN7P35236 360 aa19.18■□□□□ 0.66
SMPD1-201ENST00000342245 CRKLP46109 303 aaKnown RBP19.18■□□□□ 0.66
SMPD1-201ENST00000342245 C16orf86Q6ZW13 317 aa19.18■□□□□ 0.66
SMPD1-201ENST00000342245 FRA10AC1Q70Z53 315 aa19.18■□□□□ 0.66
SMPD1-201ENST00000342245 FAM178BQ8IXR5 827 aa19.18■□□□□ 0.66
SMPD1-201ENST00000342245 SNED1Q8TER0 1413 aa19.18■□□□□ 0.66
SMPD1-201ENST00000342245 USP6NLQ92738 828 aa19.18■□□□□ 0.66
SMPD1-201ENST00000342245 RTKNQ9BST9 563 aa19.18■□□□□ 0.66
SMPD1-201ENST00000342245 FRMD8P1Q9BZ68 369 aaPredicted RBP19.18■□□□□ 0.66
SMPD1-201ENST00000342245 CYP4F11Q9HBI6 524 aa19.18■□□□□ 0.66
SMPD1-201ENST00000342245 MRPL47Q9HD33 250 aaKnown RBP19.18■□□□□ 0.66
SMPD1-201ENST00000342245 TCF7P36402 384 aaPredicted RBP19.17■□□□□ 0.66
SMPD1-201ENST00000342245 GK3PQ14409 553 aa19.17■□□□□ 0.66
SMPD1-201ENST00000342245 CYTH1Q15438 398 aa19.17■□□□□ 0.66
SMPD1-201ENST00000342245 LIN9Q5TKA1 542 aa19.17■□□□□ 0.66
SMPD1-201ENST00000342245 DENND5BQ6ZUT9 1274 aa19.17■□□□□ 0.66
SMPD1-201ENST00000342245 SLC26A11Q86WA9 606 aa19.17■□□□□ 0.66
SMPD1-201ENST00000342245 PIWIL2Q8TC59 973 aaKnown RBP19.17■□□□□ 0.66
SMPD1-201ENST00000342245 DDX1Q92499 740 aaKnown RBP19.17■□□□□ 0.66
SMPD1-201ENST00000342245 RMND5BQ96G75 393 aaPredicted RBP19.17■□□□□ 0.66
SMPD1-201ENST00000342245 XAB2Q9HCS7 855 aaKnown RBP19.17■□□□□ 0.66
SMPD1-201ENST00000342245 DNAJC28Q9NX36 388 aa19.17■□□□□ 0.66
SMPD1-201ENST00000342245 WTIPA6NIX2 430 aaPredicted RBP19.17■□□□□ 0.66
SMPD1-201ENST00000342245 FAM47E-STBD1D6RA91 191 aa19.17■□□□□ 0.66
SMPD1-201ENST00000342245 EIF3FO00303 357 aaPredicted RBP19.17■□□□□ 0.66
SMPD1-201ENST00000342245 SNRPAP09012 282 aaKnown RBP19.17■□□□□ 0.66
SMPD1-201ENST00000342245 FSCBQ5H9T9 825 aa19.17■□□□□ 0.66
SMPD1-201ENST00000342245 ANGEL2Q5VTE6 544 aaKnown RBP19.17■□□□□ 0.66
SMPD1-201ENST00000342245 FASTKD5Q7L8L6 764 aaKnown RBP19.17■□□□□ 0.66
SMPD1-201ENST00000342245 NAT8LQ8N9F0 302 aa19.17■□□□□ 0.66
SMPD1-201ENST00000342245 TMIGD2Q96BF3 282 aa19.17■□□□□ 0.66
SMPD1-201ENST00000342245 KREMEN1Q96MU8 473 aa19.17■□□□□ 0.66
SMPD1-201ENST00000342245 EBF4Q9BQW3 602 aa19.17■□□□□ 0.66
SMPD1-201ENST00000342245 GINM1Q9NU53 330 aa19.17■□□□□ 0.66
SMPD1-201ENST00000342245 KCND2Q9NZV8 630 aa19.17■□□□□ 0.66
SMPD1-201ENST00000342245 DKK3Q9UBP4 350 aa19.17■□□□□ 0.66
SMPD1-201ENST00000342245 MARCOQ9UEW3 520 aaPredicted RBP19.17■□□□□ 0.66
SMPD1-201ENST00000342245 VPS28Q9UK41 221 aa19.17■□□□□ 0.66
SMPD1-201ENST00000342245 PTBP2Q9UKA9 531 aaKnown RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms