RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 NDC80O14777 642 aa15.68■□□□□ 0.1
TPM3-208ENST00000341485 RPL22P35268 128 aaKnown RBP15.68■□□□□ 0.1
TPM3-208ENST00000341485 NDST1P52848 882 aa15.68■□□□□ 0.1
TPM3-208ENST00000341485 INCA1Q0VD86 236 aa15.68■□□□□ 0.1
TPM3-208ENST00000341485 FAM102AQ5T9C2 384 aaPredicted RBP15.68■□□□□ 0.1
TPM3-208ENST00000341485 TRNP1Q6NT89 227 aa15.68■□□□□ 0.1
TPM3-208ENST00000341485 ARHGEF18Q6ZSZ5 1173 aa15.68■□□□□ 0.1
TPM3-208ENST00000341485 DPH6Q7L8W6 267 aa15.68■□□□□ 0.1
TPM3-208ENST00000341485 KCTD6Q8NC69 237 aa15.68■□□□□ 0.1
TPM3-208ENST00000341485 CPT1BQ92523 772 aa15.68■□□□□ 0.1
TPM3-208ENST00000341485 HSPH1Q92598 858 aa15.68■□□□□ 0.1
TPM3-208ENST00000341485 NKIRAS1Q9NYS0 192 aa15.68■□□□□ 0.1
TPM3-208ENST00000341485 BARX2Q9UMQ3 279 aaPredicted RBP15.68■□□□□ 0.1
TPM3-208ENST00000341485 USP18Q9UMW8 372 aa15.68■□□□□ 0.1
TPM3-208ENST00000341485 USP15Q9Y4E8 981 aaPredicted RBP15.68■□□□□ 0.1
TPM3-208ENST00000341485 TRIP11Q15643 1979 aa15.68■□□□□ 0.1
TPM3-208ENST00000341485 MYCP01106 439 aaPredicted RBP15.67■□□□□ 0.1
TPM3-208ENST00000341485 STX2P32856 288 aa15.67■□□□□ 0.1
TPM3-208ENST00000341485 GPX6P59796 221 aa15.67■□□□□ 0.1
TPM3-208ENST00000341485 ACAP1Q15027 740 aa15.67■□□□□ 0.1
TPM3-208ENST00000341485 RAB6CQ53S08 254 aa15.67■□□□□ 0.1
TPM3-208ENST00000341485 FBXO47Q5MNV8 452 aa15.67■□□□□ 0.1
TPM3-208ENST00000341485 NUGGCQ68CJ6 796 aa15.67■□□□□ 0.1
TPM3-208ENST00000341485 TRPM8Q7Z2W7 1104 aa15.67■□□□□ 0.1
TPM3-208ENST00000341485 PCGF5Q86SE9 256 aa15.67■□□□□ 0.1
TPM3-208ENST00000341485 UNC45BQ8IWX7 931 aa15.67■□□□□ 0.1
TPM3-208ENST00000341485 PPIL6Q8IXY8 311 aa15.67■□□□□ 0.1
TPM3-208ENST00000341485 NAT8LQ8N9F0 302 aa15.67■□□□□ 0.1
TPM3-208ENST00000341485 C18orf25Q96B23 403 aaPredicted RBP15.67■□□□□ 0.1
TPM3-208ENST00000341485 TGS1Q96RS0 853 aaKnown RBP15.67■□□□□ 0.1
TPM3-208ENST00000341485 TSPAN18Q96SJ8 248 aa15.67■□□□□ 0.1
TPM3-208ENST00000341485 RAB6CQ9H0N0 254 aa15.67■□□□□ 0.1
TPM3-208ENST00000341485 UNC93B1Q9H1C4 597 aa15.67■□□□□ 0.1
TPM3-208ENST00000341485 ABCF3Q9NUQ8 709 aa15.67■□□□□ 0.1
TPM3-208ENST00000341485 FAM105AQ9NUU6 356 aa15.67■□□□□ 0.1
TPM3-208ENST00000341485 RNF19AQ9NV58 838 aa15.67■□□□□ 0.1
TPM3-208ENST00000341485 HAUS2Q9NVX0 235 aa15.67■□□□□ 0.1
TPM3-208ENST00000341485 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.67■□□□□ 0.12e-12■■□□□ 14
TPM3-208ENST00000341485 SMIM28A0A1B0GU29 152 aa15.67■□□□□ 0.1
TPM3-208ENST00000341485 PIK3R2O00459 728 aa15.67■□□□□ 0.1
TPM3-208ENST00000341485 CLUHO75153 1309 aa15.67■□□□□ 0.1
TPM3-208ENST00000341485 DNAJC8O75937 253 aaPredicted RBP15.67■□□□□ 0.1
TPM3-208ENST00000341485 RNF8O76064 485 aa15.67■□□□□ 0.1
TPM3-208ENST00000341485 STAU1O95793 577 aaKnown RBP15.67■□□□□ 0.1
TPM3-208ENST00000341485 CD52P31358 61 aa15.67■□□□□ 0.1
TPM3-208ENST00000341485 NR1H3Q13133 447 aa15.67■□□□□ 0.1
TPM3-208ENST00000341485 ZBTB6Q15916 424 aa15.67■□□□□ 0.1
TPM3-208ENST00000341485 PKN2Q16513 984 aaKnown RBP15.67■□□□□ 0.1
TPM3-208ENST00000341485 HIF1AQ16665 826 aa15.67■□□□□ 0.1
TPM3-208ENST00000341485 FNBP1LQ5T0N5 605 aa15.67■□□□□ 0.1
TPM3-208ENST00000341485 SH3PXD2AQ5TCZ1 1133 aa15.67■□□□□ 0.1
TPM3-208ENST00000341485 PPP1R21Q6ZMI0 780 aa15.67■□□□□ 0.1
TPM3-208ENST00000341485 CYP4V2Q6ZWL3 525 aaPredicted RBP15.67■□□□□ 0.1
TPM3-208ENST00000341485 ANKMY2Q8IV38 441 aa15.67■□□□□ 0.1
TPM3-208ENST00000341485 SUGP1Q8IWZ8 645 aaKnown RBP15.67■□□□□ 0.1
TPM3-208ENST00000341485 RSAD2Q8WXG1 361 aa15.67■□□□□ 0.1
TPM3-208ENST00000341485 MAGEB18Q96M61 343 aa15.67■□□□□ 0.1
TPM3-208ENST00000341485 AGO3Q9H9G7 860 aaKnown RBP15.67■□□□□ 0.1
TPM3-208ENST00000341485 ASNSD1Q9NWL6 643 aa15.67■□□□□ 0.1
TPM3-208ENST00000341485 PADI3Q9ULW8 664 aa15.67■□□□□ 0.1
TPM3-208ENST00000341485 SLC12A4Q9UP95 1085 aa15.67■□□□□ 0.1
TPM3-208ENST00000341485 FAM47DPA6NHR8 397 aa15.66■□□□□ 0.1
TPM3-208ENST00000341485 APOC4-APOC2K7ER74 178 aa15.66■□□□□ 0.1
TPM3-208ENST00000341485 SPAG7O75391 227 aa15.66■□□□□ 0.1
TPM3-208ENST00000341485 CD4P01730 458 aa15.66■□□□□ 0.1
TPM3-208ENST00000341485 APOC2P02655 101 aa15.66■□□□□ 0.1
TPM3-208ENST00000341485 PFKMP08237 780 aa15.66■□□□□ 0.1
TPM3-208ENST00000341485 FOXN2P32314 431 aa15.66■□□□□ 0.1
TPM3-208ENST00000341485 ZNF143P52747 638 aaPredicted RBP15.66■□□□□ 0.1
TPM3-208ENST00000341485 WDR4P57081 412 aaKnown RBP15.66■□□□□ 0.1
TPM3-208ENST00000341485 EIF3EP60228 445 aaKnown RBP15.66■□□□□ 0.1
TPM3-208ENST00000341485 ZKSCAN8Q15776 578 aaPredicted RBP15.66■□□□□ 0.1
TPM3-208ENST00000341485 MSS51Q4VC12 460 aa15.66■□□□□ 0.1
TPM3-208ENST00000341485 LCLAT1Q6UWP7 414 aa15.66■□□□□ 0.1
TPM3-208ENST00000341485 FAM183BPQ6ZVS7 135 aa15.66■□□□□ 0.1
TPM3-208ENST00000341485 TAB3Q8N5C8 712 aaPredicted RBP15.66■□□□□ 0.1
TPM3-208ENST00000341485 PIWIL1Q96J94 861 aaKnown RBP15.66■□□□□ 0.1
TPM3-208ENST00000341485 WDR83Q9BRX9 315 aaKnown RBP15.66■□□□□ 0.1
TPM3-208ENST00000341485 TRPV6Q9H1D0 765 aa15.66■□□□□ 0.1
TPM3-208ENST00000341485 PHF24Q9UPV7 400 aa15.66■□□□□ 0.1
TPM3-208ENST00000341485 TCRBV7S3A2A0A539 114 aa15.66■□□□□ 0.1
TPM3-208ENST00000341485 C2CD4BA6NLJ0 364 aa15.66■□□□□ 0.1
TPM3-208ENST00000341485 E5RJQ4 531 aa15.66■□□□□ 0.1
TPM3-208ENST00000341485 GSTA1P08263 222 aa15.66■□□□□ 0.1
TPM3-208ENST00000341485 KCNE1P15382 129 aa15.66■□□□□ 0.1
TPM3-208ENST00000341485 TAC1P20366 129 aa15.66■□□□□ 0.1
TPM3-208ENST00000341485 GPD1P21695 349 aa15.66■□□□□ 0.1
TPM3-208ENST00000341485 PCK1P35558 622 aa15.66■□□□□ 0.1
TPM3-208ENST00000341485 MMRN1Q13201 1228 aa15.66■□□□□ 0.1
TPM3-208ENST00000341485 LPIN1Q14693 890 aa15.66■□□□□ 0.1
TPM3-208ENST00000341485 TRIM71Q2Q1W2 868 aaKnown RBP15.66■□□□□ 0.1
TPM3-208ENST00000341485 FAM26DQ5JW98 314 aa15.66■□□□□ 0.1
TPM3-208ENST00000341485 ZNF618Q5T7W0 954 aa15.66■□□□□ 0.1
TPM3-208ENST00000341485 OR6B2Q6IFH4 312 aa15.66■□□□□ 0.1
TPM3-208ENST00000341485 CGB2Q6NT52 195 aa15.66■□□□□ 0.1
TPM3-208ENST00000341485 RXFP2Q8WXD0 754 aa15.66■□□□□ 0.1
TPM3-208ENST00000341485 CALN1Q9BXU9 219 aa15.66■□□□□ 0.1
TPM3-208ENST00000341485 TRABDQ9H4I3 376 aa15.66■□□□□ 0.1
TPM3-208ENST00000341485 KIF9Q9HAQ2 790 aa15.66■□□□□ 0.1
TPM3-208ENST00000341485 UBN1Q9NPG3 1134 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms