RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 NGRNQ9NPE2 291 aaKnown RBP20.97■□□□□ 0.95
SPG7-202ENST00000341316 DERAQ9Y315 318 aa20.97■□□□□ 0.95
SPG7-202ENST00000341316 HGSO14964 777 aaPredicted RBP20.97■□□□□ 0.95
SPG7-202ENST00000341316 ASMTLO95671 621 aa20.97■□□□□ 0.95
SPG7-202ENST00000341316 RPSAP08865 295 aaKnown RBP20.97■□□□□ 0.95
SPG7-202ENST00000341316 ROR1Q01973 937 aa20.97■□□□□ 0.95
SPG7-202ENST00000341316 NR1H3Q13133 447 aa20.97■□□□□ 0.95
SPG7-202ENST00000341316 ALKAL1Q6UXT8 129 aa20.97■□□□□ 0.95
SPG7-202ENST00000341316 PPP1R21Q6ZMI0 780 aa20.97■□□□□ 0.95
SPG7-202ENST00000341316 C3orf62Q6ZUJ4 267 aa20.97■□□□□ 0.95
SPG7-202ENST00000341316 PLEKHH3Q7Z736 793 aa20.97■□□□□ 0.95
SPG7-202ENST00000341316 PQLC3Q8N755 202 aa20.97■□□□□ 0.95
SPG7-202ENST00000341316 CLEC4CQ8WTT0 213 aa20.97■□□□□ 0.95
SPG7-202ENST00000341316 FAM172AQ8WUF8 416 aa20.97■□□□□ 0.95
SPG7-202ENST00000341316 APOL6Q9BWW8 343 aa20.97■□□□□ 0.95
SPG7-202ENST00000341316 MIS12Q9H081 205 aa20.97■□□□□ 0.95
SPG7-202ENST00000341316 RXFP1Q9HBX9 757 aa20.97■□□□□ 0.95
SPG7-202ENST00000341316 GRID1Q9ULK0 1009 aa20.97■□□□□ 0.95
SPG7-202ENST00000341316 DPYSL4O14531 572 aa20.96■□□□□ 0.95
SPG7-202ENST00000341316 RECQL4O94761 1208 aa20.96■□□□□ 0.95
SPG7-202ENST00000341316 KRT16P08779 473 aa20.96■□□□□ 0.95
SPG7-202ENST00000341316 SLC6A3Q01959 620 aa20.96■□□□□ 0.95
SPG7-202ENST00000341316 MGAT5Q09328 741 aa20.96■□□□□ 0.95
SPG7-202ENST00000341316 STILQ15468 1287 aa20.96■□□□□ 0.95
SPG7-202ENST00000341316 BBS9Q3SYG4 887 aa20.96■□□□□ 0.95
SPG7-202ENST00000341316 C9orf57Q5W0N0 161 aa20.96■□□□□ 0.95
SPG7-202ENST00000341316 PLD5Q8N7P1 536 aa20.96■□□□□ 0.95
SPG7-202ENST00000341316 OR6B3Q8NGW1 331 aa20.96■□□□□ 0.95
SPG7-202ENST00000341316 LRRN4Q8WUT4 740 aa20.96■□□□□ 0.95
SPG7-202ENST00000341316 TMEM40Q8WWA1 233 aa20.96■□□□□ 0.95
SPG7-202ENST00000341316 PAIP2Q9BPZ3 127 aaKnown RBP20.96■□□□□ 0.95
SPG7-202ENST00000341316 PLCD4Q9BRC7 762 aa20.96■□□□□ 0.95
SPG7-202ENST00000341316 EBF2Q9HAK2 575 aa20.96■□□□□ 0.95
SPG7-202ENST00000341316 SLC24A2Q9UI40 661 aa20.96■□□□□ 0.95
SPG7-202ENST00000341316 TRIM33Q9UPN9 1127 aa20.96■□□□□ 0.95
SPG7-202ENST00000341316 RRN3P2A6NIE6 340 aa20.95■□□□□ 0.95
SPG7-202ENST00000341316 A8MUI8 341 aa20.95■□□□□ 0.95
SPG7-202ENST00000341316 MAP3K6O95382 1288 aa20.95■□□□□ 0.95
SPG7-202ENST00000341316 ALADP13716 330 aa20.95■□□□□ 0.95
SPG7-202ENST00000341316 GEMIN4P57678 1058 aaKnown RBP20.95■□□□□ 0.95
SPG7-202ENST00000341316 KRT81Q14533 505 aa20.95■□□□□ 0.95
SPG7-202ENST00000341316 ATP11CQ8NB49 1132 aa20.95■□□□□ 0.95
SPG7-202ENST00000341316 FBF1Q8TES7 1133 aa20.95■□□□□ 0.95
SPG7-202ENST00000341316 SPOCK2Q92563 424 aa20.95■□□□□ 0.95
SPG7-202ENST00000341316 PHACTR1Q9C0D0 580 aa20.95■□□□□ 0.95
SPG7-202ENST00000341316 USP29Q9HBJ7 922 aa20.95■□□□□ 0.95
SPG7-202ENST00000341316 PSMC3IPQ9P2W1 217 aaPredicted RBP20.95■□□□□ 0.95
SPG7-202ENST00000341316 PRPF4O43172 522 aaKnown RBP eCLIP20.95■□□□□ 0.942e-8■■■■■ 28.6
SPG7-202ENST00000341316 FGFR1P11362 822 aa20.95■□□□□ 0.94
SPG7-202ENST00000341316 RPA3P35244 121 aaPredicted RBP20.95■□□□□ 0.94
SPG7-202ENST00000341316 YARSP54577 528 aaKnown RBP20.95■□□□□ 0.94
SPG7-202ENST00000341316 NOTUMQ6P988 496 aa20.95■□□□□ 0.94
SPG7-202ENST00000341316 PCDH19Q8TAB3 1148 aa20.95■□□□□ 0.94
SPG7-202ENST00000341316 SNRNP25Q9BV90 132 aaKnown RBP20.95■□□□□ 0.94
SPG7-202ENST00000341316 PCDH18Q9HCL0 1135 aa20.95■□□□□ 0.94
SPG7-202ENST00000341316 KLK14Q9P0G3 267 aa20.95■□□□□ 0.94
SPG7-202ENST00000341316 SPTLC1O15269 473 aa20.94■□□□□ 0.94
SPG7-202ENST00000341316 DARSP14868 501 aaKnown RBP20.94■□□□□ 0.94
SPG7-202ENST00000341316 GBP2P32456 591 aaPredicted RBP20.94■□□□□ 0.94
SPG7-202ENST00000341316 HDAC4P56524 1084 aa20.94■□□□□ 0.94
SPG7-202ENST00000341316 TFDP2Q14188 446 aa20.94■□□□□ 0.94
SPG7-202ENST00000341316 MTFR1Q15390 333 aa20.94■□□□□ 0.94
SPG7-202ENST00000341316 FAM47CQ5HY64 1035 aa20.94■□□□□ 0.94
SPG7-202ENST00000341316 ZNF618Q5T7W0 954 aa20.94■□□□□ 0.94
SPG7-202ENST00000341316 LRRC52Q8N7C0 313 aa20.94■□□□□ 0.94
SPG7-202ENST00000341316 C7orf31Q8N865 590 aa20.94■□□□□ 0.94
SPG7-202ENST00000341316 BEST2Q8NFU1 509 aa20.94■□□□□ 0.94
SPG7-202ENST00000341316 MAGEB5Q9BZ81 275 aa20.94■□□□□ 0.94
SPG7-202ENST00000341316 ARHGEF3Q9NR81 526 aa20.94■□□□□ 0.94
SPG7-202ENST00000341316 CNTN3Q9P232 1028 aa20.94■□□□□ 0.94
SPG7-202ENST00000341316 KLHL14Q9P2G3 628 aa20.94■□□□□ 0.94
SPG7-202ENST00000341316 STK38LQ9Y2H1 464 aa20.94■□□□□ 0.94
SPG7-202ENST00000341316 KAT6AQ92794 2004 aa20.94■□□□□ 0.94
SPG7-202ENST00000341316 A6NJR5 290 aa20.94■□□□□ 0.94
SPG7-202ENST00000341316 H7C0C1 242 aa20.94■□□□□ 0.94
SPG7-202ENST00000341316 F2P00734 622 aa20.94■□□□□ 0.94
SPG7-202ENST00000341316 PDGFRBP09619 1106 aa20.94■□□□□ 0.94
SPG7-202ENST00000341316 CYP2C9P11712 490 aa20.94■□□□□ 0.94
SPG7-202ENST00000341316 CCDC130P13994 396 aa20.94■□□□□ 0.94
SPG7-202ENST00000341316 LMO2P25791 158 aa20.94■□□□□ 0.94
SPG7-202ENST00000341316 SDC4P31431 198 aa20.94■□□□□ 0.94
SPG7-202ENST00000341316 STIP1P31948 543 aaKnown RBP20.94■□□□□ 0.94
SPG7-202ENST00000341316 ATP5OP48047 213 aa20.94■□□□□ 0.94
SPG7-202ENST00000341316 ATXN1P54253 815 aaKnown RBP20.94■□□□□ 0.94
SPG7-202ENST00000341316 RASA2Q15283 850 aa20.94■□□□□ 0.94
SPG7-202ENST00000341316 SLC1A5Q15758 541 aa20.94■□□□□ 0.94
SPG7-202ENST00000341316 ANKLE1Q8NAG6 615 aa20.94■□□□□ 0.94
SPG7-202ENST00000341316 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.94■□□□□ 0.94
SPG7-202ENST00000341316 KBTBD7Q8WVZ9 684 aa20.94■□□□□ 0.94
SPG7-202ENST00000341316 SMC6Q96SB8 1091 aa20.94■□□□□ 0.94
SPG7-202ENST00000341316 DHRS4Q9BTZ2 278 aa20.94■□□□□ 0.94
SPG7-202ENST00000341316 RNF39Q9H2S5 420 aa20.94■□□□□ 0.94
SPG7-202ENST00000341316 ACSS3Q9H6R3 686 aa20.94■□□□□ 0.94
SPG7-202ENST00000341316 CHMP2BQ9UQN3 213 aa20.94■□□□□ 0.94
SPG7-202ENST00000341316 HEY1Q9Y5J3 304 aa20.94■□□□□ 0.94
SPG7-202ENST00000341316 MBLAC1A4D2B0 266 aaPredicted RBP20.93■□□□□ 0.94
SPG7-202ENST00000341316 A8MXQ7 604 aa20.93■□□□□ 0.94
SPG7-202ENST00000341316 TYROBPO43914 113 aa20.93■□□□□ 0.94
SPG7-202ENST00000341316 AVILO75366 819 aa20.93■□□□□ 0.94
SPG7-202ENST00000341316 ANP32DO95626 131 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms