RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 RBM19Q9Y4C8 960 aaKnown RBP12.16□□□□□ -0.46
ATXN3-201ENST00000340660 PCSK5Q92824 1860 aa12.15□□□□□ -0.46
ATXN3-201ENST00000340660 ADARB2-AS1A8MUL3 147 aa12.15□□□□□ -0.46
ATXN3-201ENST00000340660 INO80B-WBP1J3KQ70 363 aa12.15□□□□□ -0.46
ATXN3-201ENST00000340660 USP12O75317 370 aa12.15□□□□□ -0.46
ATXN3-201ENST00000340660 KAT7O95251 611 aa12.15□□□□□ -0.46
ATXN3-201ENST00000340660 NMT1P30419 496 aaKnown RBP12.15□□□□□ -0.46
ATXN3-201ENST00000340660 PTENP60484 403 aa12.15□□□□□ -0.46
ATXN3-201ENST00000340660 NCBP1Q09161 790 aaKnown RBP12.15□□□□□ -0.46
ATXN3-201ENST00000340660 SRSF6Q13247 344 aaKnown RBP12.15□□□□□ -0.46
ATXN3-201ENST00000340660 ILKQ13418 452 aa12.15□□□□□ -0.46
ATXN3-201ENST00000340660 ZNF268Q14587 947 aaPredicted RBP12.15□□□□□ -0.46
ATXN3-201ENST00000340660 CRTC2Q53ET0 693 aaPredicted RBP12.15□□□□□ -0.46
ATXN3-201ENST00000340660 SGO2Q562F6 1265 aa12.15□□□□□ -0.46
ATXN3-201ENST00000340660 TXNDC8Q6A555 127 aa12.15□□□□□ -0.46
ATXN3-201ENST00000340660 ANO5Q75V66 913 aa12.15□□□□□ -0.46
ATXN3-201ENST00000340660 CATIPQ7Z7H3 387 aa12.15□□□□□ -0.46
ATXN3-201ENST00000340660 ALDH16A1Q8IZ83 802 aa12.15□□□□□ -0.46
ATXN3-201ENST00000340660 TTC16Q8NEE8 873 aa12.15□□□□□ -0.46
ATXN3-201ENST00000340660 TOE1Q96GM8 510 aaKnown RBP12.15□□□□□ -0.46
ATXN3-201ENST00000340660 CEP63Q96MT8 703 aa12.15□□□□□ -0.46
ATXN3-201ENST00000340660 PPP1R10Q96QC0 940 aaKnown RBP12.15□□□□□ -0.46
ATXN3-201ENST00000340660 GCNAQ96QF7 691 aa12.15□□□□□ -0.46
ATXN3-201ENST00000340660 WSB2Q9NYS7 404 aaPredicted RBP12.15□□□□□ -0.46
ATXN3-201ENST00000340660 ADAMTS1Q9UHI8 967 aa12.15□□□□□ -0.46
ATXN3-201ENST00000340660 CCDC168Q8NDH2 2452 aa12.15□□□□□ -0.46
ATXN3-201ENST00000340660 A0A0A0MRY4 1105 aa12.14□□□□□ -0.47
ATXN3-201ENST00000340660 A0A1B0GUA9 196 aa12.14□□□□□ -0.47
ATXN3-201ENST00000340660 hCG_1642624A0A1W2PR95 340 aa12.14□□□□□ -0.47
ATXN3-201ENST00000340660 CHMP2AO43633 222 aa12.14□□□□□ -0.47
ATXN3-201ENST00000340660 HOXB2P14652 356 aa12.14□□□□□ -0.47
ATXN3-201ENST00000340660 TNFSF9P41273 254 aa12.14□□□□□ -0.47
ATXN3-201ENST00000340660 WASP42768 502 aa12.14□□□□□ -0.47
ATXN3-201ENST00000340660 AFF3P51826 1226 aaKnown RBP12.14□□□□□ -0.47
ATXN3-201ENST00000340660 SOX4Q06945 474 aaPredicted RBP12.14□□□□□ -0.47
ATXN3-201ENST00000340660 MCMDC2Q4G0Z9 681 aa12.14□□□□□ -0.47
ATXN3-201ENST00000340660 KANSL1Q7Z3B3 1105 aa12.14□□□□□ -0.47
ATXN3-201ENST00000340660 ITIH5Q86UX2 942 aa12.14□□□□□ -0.47
ATXN3-201ENST00000340660 FERMT3Q86UX7 667 aa12.14□□□□□ -0.47
ATXN3-201ENST00000340660 CD163Q86VB7 1156 aa12.14□□□□□ -0.47
ATXN3-201ENST00000340660 ATCAYQ86WG3 371 aa12.14□□□□□ -0.47
ATXN3-201ENST00000340660 C12orf40Q86WS4 652 aa12.14□□□□□ -0.47
ATXN3-201ENST00000340660 CADM4Q8NFZ8 388 aa12.14□□□□□ -0.47
ATXN3-201ENST00000340660 PIGOQ8TEQ8 1089 aa12.14□□□□□ -0.47
ATXN3-201ENST00000340660 SCG3Q8WXD2 468 aaKnown RBP12.14□□□□□ -0.47
ATXN3-201ENST00000340660 CRYGNQ8WXF5 182 aa12.14□□□□□ -0.47
ATXN3-201ENST00000340660 TNFRSF25Q93038 417 aa12.14□□□□□ -0.47
ATXN3-201ENST00000340660 CCDC97Q96F63 343 aaPredicted RBP12.14□□□□□ -0.47
ATXN3-201ENST00000340660 CALR3Q96L12 384 aaKnown RBP12.14□□□□□ -0.47
ATXN3-201ENST00000340660 JPH2Q9BR39 696 aaPredicted RBP12.14□□□□□ -0.47
ATXN3-201ENST00000340660 ZMYM5Q9UJ78 669 aa12.14□□□□□ -0.47
ATXN3-201ENST00000340660 ANAPC2Q9UJX6 822 aa12.14□□□□□ -0.47
ATXN3-201ENST00000340660 ZFC3H1O60293 1989 aaKnown RBP12.13□□□□□ -0.47
ATXN3-201ENST00000340660 A0A087X0B3 334 aa12.13□□□□□ -0.47
ATXN3-201ENST00000340660 A0A1W2PNU3 283 aaPredicted RBP12.13□□□□□ -0.47
ATXN3-201ENST00000340660 METTL12A8MUP2 240 aa12.13□□□□□ -0.47
ATXN3-201ENST00000340660 CHRNA4P43681 627 aa12.13□□□□□ -0.47
ATXN3-201ENST00000340660 NPEPPSP55786 919 aa12.13□□□□□ -0.47
ATXN3-201ENST00000340660 INF2Q27J81 1249 aa12.13□□□□□ -0.47
ATXN3-201ENST00000340660 CENPPQ6IPU0 288 aa12.13□□□□□ -0.47
ATXN3-201ENST00000340660 MIB1Q86YT6 1006 aa12.13□□□□□ -0.47
ATXN3-201ENST00000340660 EID2Q8N6I1 236 aa12.13□□□□□ -0.47
ATXN3-201ENST00000340660 ATAD1Q8NBU5 361 aa12.13□□□□□ -0.47
ATXN3-201ENST00000340660 MRGPRX1Q96LB2 322 aa12.13□□□□□ -0.47
ATXN3-201ENST00000340660 UROC1Q96N76 676 aa12.13□□□□□ -0.47
ATXN3-201ENST00000340660 PNKPQ96T60 521 aa12.13□□□□□ -0.47
ATXN3-201ENST00000340660 MYO18AQ92614 2054 aaKnown RBP12.13□□□□□ -0.47
ATXN3-201ENST00000340660 A0A1B0GTQ1 180 aa12.12□□□□□ -0.47
ATXN3-201ENST00000340660 BTBD18B2RXH4 712 aa12.12□□□□□ -0.47
ATXN3-201ENST00000340660 MTSS1O43312 755 aa12.12□□□□□ -0.47
ATXN3-201ENST00000340660 PLEKHA8P1O95397 391 aa12.12□□□□□ -0.47
ATXN3-201ENST00000340660 FOSP01100 380 aaPredicted RBP12.12□□□□□ -0.47
ATXN3-201ENST00000340660 APODP05090 189 aa12.12□□□□□ -0.47
ATXN3-201ENST00000340660 ALAS2P22557 587 aa12.12□□□□□ -0.47
ATXN3-201ENST00000340660 CTSKP43235 329 aa12.12□□□□□ -0.47
ATXN3-201ENST00000340660 SETQ01105 290 aaPredicted RBP12.12□□□□□ -0.47
ATXN3-201ENST00000340660 KDSRQ06136 332 aa12.12□□□□□ -0.47
ATXN3-201ENST00000340660 IGF2-ASQ6U949 168 aa12.12□□□□□ -0.47
ATXN3-201ENST00000340660 SRBD1Q8N5C6 995 aaKnown RBP12.12□□□□□ -0.47
ATXN3-201ENST00000340660 IPO4Q8TEX9 1081 aaKnown RBP12.12□□□□□ -0.47
ATXN3-201ENST00000340660 FUCA2Q9BTY2 467 aa12.12□□□□□ -0.47
ATXN3-201ENST00000340660 KRT23Q9C075 422 aa12.12□□□□□ -0.47
ATXN3-201ENST00000340660 UNC45AQ9H3U1 944 aa12.12□□□□□ -0.47
ATXN3-201ENST00000340660 DHX33Q9H6R0 707 aaKnown RBP12.12□□□□□ -0.47
ATXN3-201ENST00000340660 MTMR11A4FU01 709 aa12.11□□□□□ -0.47
ATXN3-201ENST00000340660 NFATC1O95644 943 aa12.11□□□□□ -0.47
ATXN3-201ENST00000340660 ATF6P18850 670 aa12.11□□□□□ -0.47
ATXN3-201ENST00000340660 DDX6P26196 483 aaKnown RBP eCLIP12.11□□□□□ -0.47
ATXN3-201ENST00000340660 TNFRSF4P43489 277 aa12.11□□□□□ -0.47
ATXN3-201ENST00000340660 FAM160A1Q05DH4 1040 aa12.11□□□□□ -0.47
ATXN3-201ENST00000340660 SHBQ15464 509 aa12.11□□□□□ -0.47
ATXN3-201ENST00000340660 PRAMEF14Q5SWL7 426 aa12.11□□□□□ -0.47
ATXN3-201ENST00000340660 CDCP2Q5VXM1 449 aa12.11□□□□□ -0.47
ATXN3-201ENST00000340660 CAPRIN2Q6IMN6 1127 aaKnown RBP12.11□□□□□ -0.47
ATXN3-201ENST00000340660 RIC8AQ9NPQ8 531 aa12.11□□□□□ -0.47
ATXN3-201ENST00000340660 DONSONQ9NYP3 566 aa12.11□□□□□ -0.47
ATXN3-201ENST00000340660 ZNF638Q14966 1978 aaKnown RBP12.1□□□□□ -0.47
ATXN3-201ENST00000340660 MYMKA6NI61 221 aa12.1□□□□□ -0.47
ATXN3-201ENST00000340660 KCNJ18B7U540 433 aa12.1□□□□□ -0.47
ATXN3-201ENST00000340660 LAD1O00515 517 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms