RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 HOXD13P35453 343 aa7.9□□□□□ -1.15
HIPK1-201ENST00000340480 SNCBQ16143 134 aa7.9□□□□□ -1.15
HIPK1-201ENST00000340480 PPP4R4Q6NUP7 873 aa7.9□□□□□ -1.15
HIPK1-201ENST00000340480 LRRC6Q86X45 466 aa7.9□□□□□ -1.15
HIPK1-201ENST00000340480 HDAC7Q8WUI4 952 aa7.9□□□□□ -1.15
HIPK1-201ENST00000340480 TFB1MQ8WVM0 346 aaKnown RBP7.9□□□□□ -1.15
HIPK1-201ENST00000340480 COPS5Q92905 334 aa7.9□□□□□ -1.15
HIPK1-201ENST00000340480 FSD1LQ9BXM9 530 aa7.9□□□□□ -1.15
HIPK1-201ENST00000340480 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.9□□□□□ -1.154e-7■□□□□ 11.3
HIPK1-201ENST00000340480 SPECC1L-ADORA2AF8WAN1 911 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 H7C4K7 107 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 MMP3P08254 477 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 TAC1P20366 129 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 YWHAZP63104 245 aaKnown RBP7.89□□□□□ -1.15
HIPK1-201ENST00000340480 NAB1Q13506 487 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 DCAF6Q58WW2 860 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 LCLAT1Q6UWP7 414 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 MFSD7Q6UXD7 560 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 SPATA21Q7Z572 469 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 LZTR1Q8N653 840 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 CENPTQ96BT3 561 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 PCDHB18PQ96TA0 734 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 RASSF10A6NK89 507 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 IGF2BP3O00425 579 aaKnown RBP eCLIP7.89□□□□□ -1.159e-6■■■□□ 16.8
HIPK1-201ENST00000340480 RIPK2O43353 540 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 ANXA9O76027 345 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 NFICP08651 508 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 ARF4P18085 180 aaPredicted RBP7.89□□□□□ -1.15
HIPK1-201ENST00000340480 AP1B1Q10567 949 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 NME3Q13232 169 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 MON1BQ7L1V2 547 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 C18orf25Q96B23 403 aaPredicted RBP7.89□□□□□ -1.15
HIPK1-201ENST00000340480 ZBTB18Q99592 522 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 ELOVL4Q9GZR5 314 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 GGA2Q9UJY4 613 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 RAD54BQ9Y620 910 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 TMEM120BA0PK00 339 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 ERI2A8K979 691 aaKnown RBP7.89□□□□□ -1.15
HIPK1-201ENST00000340480 EGFRP00533 1210 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 SLC4A1P02730 911 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 ITGAVP06756 1048 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 APRTP07741 180 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 SCNN1AP37088 669 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 CASP2P42575 452 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 RPL21P46778 160 aaKnown RBP7.89□□□□□ -1.15
HIPK1-201ENST00000340480 MBTD1Q05BQ5 628 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 ZNF844Q08AG5 666 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 NAA25Q14CX7 972 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 DRICH1Q6PGQ1 229 aaPredicted RBP7.89□□□□□ -1.15
HIPK1-201ENST00000340480 PATL1Q86TB9 770 aaKnown RBP7.89□□□□□ -1.15
HIPK1-201ENST00000340480 ALG3Q92685 438 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 SH3KBP1Q96B97 665 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 FGD4Q96M96 766 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 SLITRK1Q96PX8 696 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 ZNF670Q9BS34 389 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 TMEM109Q9BVC6 243 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 RCOR3Q9P2K3 495 aaPredicted RBP7.89□□□□□ -1.15
HIPK1-201ENST00000340480 FZD1Q9UP38 647 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 DNAJC8O75937 253 aaPredicted RBP7.89□□□□□ -1.15
HIPK1-201ENST00000340480 STAU1O95793 577 aaKnown RBP7.89□□□□□ -1.15
HIPK1-201ENST00000340480 TMPRSS15P98073 1019 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 PSTKQ8IV42 348 aaKnown RBP7.89□□□□□ -1.15
HIPK1-201ENST00000340480 IQCKQ8N0W5 287 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 ANKRD52Q8NB46 1076 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 CALML6Q8TD86 181 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 DNAJB3Q8WWF6 145 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 ATG4AQ8WYN0 398 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 ART4Q93070 314 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 BAIAP2L1Q9UHR4 511 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 GIT1Q9Y2X7 761 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 USP15Q9Y4E8 981 aaPredicted RBP7.89□□□□□ -1.15
HIPK1-201ENST00000340480 KIAA1551Q9HCM1 1747 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 GNGT2O14610 69 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 CILPO75339 1184 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 POLBP06746 335 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 CPB1P15086 417 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 THPOP40225 353 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 TARBP2Q15633 366 aaKnown RBP7.89□□□□□ -1.15
HIPK1-201ENST00000340480 ATPAF2Q8N5M1 289 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 GIPC2Q8TF65 315 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 ARL8AQ96BM9 186 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 STAMBPL1Q96FJ0 436 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 SMARCD1Q96GM5 515 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 WWP1Q9H0M0 922 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 LSM7Q9UK45 103 aaKnown RBP7.89□□□□□ -1.15
HIPK1-201ENST00000340480 O00370 1275 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 OPHN1O60890 802 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 TADA2AO75478 443 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 SPRP35270 261 aaPredicted RBP7.89□□□□□ -1.15
HIPK1-201ENST00000340480 KPNA1P52294 538 aaPredicted RBP7.89□□□□□ -1.15
HIPK1-201ENST00000340480 MRPS6P82932 125 aaKnown RBP7.89□□□□□ -1.15
HIPK1-201ENST00000340480 ERMARDQ5T6L9 678 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 SRLQ86TD4 932 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 SLCO2A1Q92959 643 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 FIZ1Q96SL8 496 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 DRC3Q9H069 523 aa7.89□□□□□ -1.15
HIPK1-201ENST00000340480 CHORDC1Q9UHD1 332 aaPredicted RBP7.89□□□□□ -1.15
HIPK1-201ENST00000340480 GOLGA8MH3BSY2 632 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 CCDC22O60826 627 aa7.88□□□□□ -1.15
HIPK1-201ENST00000340480 KDELR1P24390 212 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms