RNA–Protein interactions for RNA: ENST00000339948.3

ZNF648-201, Transcript of zinc finger protein 648, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF648, Length 3,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF648-201ENST00000339948 SPATA31D4Q6ZUB0 917 aa12.06□□□□□ -0.48
ZNF648-201ENST00000339948 TNS4Q8IZW8 715 aa12.06□□□□□ -0.48
ZNF648-201ENST00000339948 ICA1LQ8NDH6 482 aa12.06□□□□□ -0.48
ZNF648-201ENST00000339948 TMC2Q8TDI7 906 aa12.06□□□□□ -0.48
ZNF648-201ENST00000339948 ZNF212Q9UDV6 495 aa12.06□□□□□ -0.48
ZNF648-201ENST00000339948 LNPEPQ9UIQ6 1025 aa12.06□□□□□ -0.48
ZNF648-201ENST00000339948 ZNRF3Q9ULT6 936 aa12.06□□□□□ -0.48
ZNF648-201ENST00000339948 PDGFRAP16234 1089 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 POLR2BP30876 1174 aaKnown RBP12.05□□□□□ -0.48
ZNF648-201ENST00000339948 FASTKD1Q53R41 847 aaKnown RBP12.05□□□□□ -0.48
ZNF648-201ENST00000339948 EFHC1Q5JVL4 640 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 PLEKHA7Q6IQ23 1121 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 C15orf52Q6ZUT6 534 aaKnown RBP12.05□□□□□ -0.48
ZNF648-201ENST00000339948 MCF2L2Q86YR7 1114 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 DCLK2Q8N568 766 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 OR6Y1Q8NGX8 325 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 ATG4CQ96DT6 458 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 KCNK13Q9HB14 408 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 XAB2Q9HCS7 855 aaKnown RBP12.05□□□□□ -0.48
ZNF648-201ENST00000339948 ZNF358Q9NW07 568 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 ZNF711Q9Y462 761 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 GOLGA8TH3BQL2 631 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 MAGEB2O15479 319 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 ITM2AO43736 263 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 LRCH4O75427 683 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 KRT38O76015 456 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 CYP1A1P04798 512 aaPredicted RBP12.05□□□□□ -0.48
ZNF648-201ENST00000339948 GSTA2P09210 222 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 KDELR1P24390 212 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 NCKAP1LP55160 1127 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 PGM5Q15124 567 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 CNGA3Q16281 694 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 PTPN20Q4JDL3 420 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 LIN52Q52LA3 116 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 DACT2Q5SW24 774 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 TTC39BQ5VTQ0 682 aaPredicted RBP12.05□□□□□ -0.48
ZNF648-201ENST00000339948 SLC26A11Q86WA9 606 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 ALKBH8Q96BT7 664 aaKnown RBP12.05□□□□□ -0.48
ZNF648-201ENST00000339948 WNK4Q96J92 1243 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 MFSD14AQ96MC6 490 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 DHX35Q9H5Z1 703 aaKnown RBP12.05□□□□□ -0.48
ZNF648-201ENST00000339948 CYP26B1Q9NR63 512 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 MYO18AQ92614 2054 aaKnown RBP12.05□□□□□ -0.48
ZNF648-201ENST00000339948 MMP8P22894 467 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 MRPS22P82650 360 aaKnown RBP12.05□□□□□ -0.48
ZNF648-201ENST00000339948 KRT76Q01546 638 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 OCRLQ01968 901 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 ITGA9Q13797 1035 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 PIGHQ14442 188 aaPredicted RBP12.05□□□□□ -0.48
ZNF648-201ENST00000339948 ZC3H12AQ5D1E8 599 aaKnown RBP12.05□□□□□ -0.48
ZNF648-201ENST00000339948 PPM1JQ5JR12 505 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 TMCO4Q5TGY1 634 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 CIAPIN1Q6FI81 312 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 SNRNP48Q6IEG0 339 aaKnown RBP12.05□□□□□ -0.48
ZNF648-201ENST00000339948 SULF1Q8IWU6 871 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 ZSCAN18Q8TBC5 510 aaPredicted RBP12.05□□□□□ -0.48
ZNF648-201ENST00000339948 MIPOL1Q8TD10 442 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 OPTNQ96CV9 577 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 PDCD2LQ9BRP1 358 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 TMEM165Q9HC07 324 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 RIPK3Q9Y572 518 aa12.05□□□□□ -0.48
ZNF648-201ENST00000339948 KRT7P08729 469 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 NPR1P16066 1061 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 FGFR3P22607 806 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 CAP2P40123 477 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 JAK3P52333 1124 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 COPAP53621 1224 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 USP46P62068 366 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 OASLQ15646 514 aaKnown RBP12.04□□□□□ -0.48
ZNF648-201ENST00000339948 MTHFD1LQ6UB35 978 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 TRIM72Q6ZMU5 477 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 C4orf19Q8IY42 314 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 MPP5Q8N3R9 675 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 NME8Q8N427 588 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 ERLEC1Q96DZ1 483 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 PRPF18Q99633 342 aaKnown RBP12.04□□□□□ -0.48
ZNF648-201ENST00000339948 WDR83Q9BRX9 315 aaKnown RBP12.04□□□□□ -0.48
ZNF648-201ENST00000339948 FOXP3Q9BZS1 431 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 C20orf27Q9GZN8 174 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 USP18Q9UMW8 372 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 CNTNAP2Q9UHC6 1331 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 IRF6O14896 467 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 USP12O75317 370 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 NUMBP49757 651 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 NUDT2P50583 147 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 C1QBPQ07021 282 aaKnown RBP12.04□□□□□ -0.48
ZNF648-201ENST00000339948 PRKD1Q15139 912 aaPredicted RBP12.04□□□□□ -0.48
ZNF648-201ENST00000339948 N4BP2L1Q5TBK1 243 aaPredicted RBP12.04□□□□□ -0.48
ZNF648-201ENST00000339948 STRIP1Q5VSL9 837 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 FAM160B2Q86V87 743 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 MCPH1Q8NEM0 835 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 TMA16Q96EY4 203 aaKnown RBP12.04□□□□□ -0.48
ZNF648-201ENST00000339948 STRA6Q9BX79 667 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 PREBQ9HCU5 417 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 JPH1Q9HDC5 661 aaPredicted RBP12.04□□□□□ -0.48
ZNF648-201ENST00000339948 XPNPEP1Q9NQW7 623 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 ZNF277Q9NRM2 450 aaPredicted RBP12.04□□□□□ -0.48
ZNF648-201ENST00000339948 EURLQ9NYK6 297 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 FEM1BQ9UK73 627 aa12.04□□□□□ -0.48
ZNF648-201ENST00000339948 SOX13Q9UN79 622 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms