RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 MRPL46Q9H2W6 279 aaKnown RBP9.64□□□□□ -0.87
RPGR-202ENST00000339363 UBE2TQ9NPD8 197 aaPredicted RBP9.64□□□□□ -0.87
RPGR-202ENST00000339363 GNEQ9Y223 722 aaKnown RBP9.64□□□□□ -0.87
RPGR-202ENST00000339363 PDXKO00764 312 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 PLSCR1O15162 318 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 PFDN6O15212 129 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 TCF4P15884 667 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 JAK1P23458 1154 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 RPA1P27694 616 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 MAPK4P31152 587 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 TRAF2Q12933 501 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 RALGDSQ12967 914 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 GRAPQ13588 217 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 FASTKD3Q14CZ7 662 aaKnown RBP9.63□□□□□ -0.87
RPGR-202ENST00000339363 TGFBIQ15582 683 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 RALGPS1Q5JS13 557 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 ATG16L1Q676U5 607 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 TAS2R42Q7RTR8 314 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 GRAPLQ8TC17 118 aaPredicted RBP9.63□□□□□ -0.87
RPGR-202ENST00000339363 JADE3Q92613 823 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 BHMTQ93088 406 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 TMIGD2Q96BF3 282 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 TAMM41Q96BW9 452 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 KREMEN1Q96MU8 473 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 SENP7Q9BQF6 1050 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 MAK16Q9BXY0 300 aaKnown RBP9.63□□□□□ -0.87
RPGR-202ENST00000339363 NOL6Q9H6R4 1146 aaKnown RBP9.63□□□□□ -0.87
RPGR-202ENST00000339363 SACM1LQ9NTJ5 587 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 HACD3Q9P035 362 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 SCAF8Q9UPN6 1271 aaKnown RBP9.63□□□□□ -0.87
RPGR-202ENST00000339363 LAMA2P24043 3122 aaKnown RBP9.63□□□□□ -0.87
RPGR-202ENST00000339363 DDX39AO00148 427 aaKnown RBP9.63□□□□□ -0.87
RPGR-202ENST00000339363 MAGEB2O15479 319 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 GSSP48637 474 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 SOX10P56693 466 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 MRPS22P82650 360 aaKnown RBP9.63□□□□□ -0.87
RPGR-202ENST00000339363 GAD2Q05329 585 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 FBXL19Q6PCT2 694 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 UGT2A3Q6UWM9 527 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 TPTE2Q6XPS3 522 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 DENND5BQ6ZUT9 1274 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 C1orf186Q6ZWK4 172 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 RSPH3Q86UC2 560 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 NUDCD3Q8IVD9 361 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 BTBD9Q96Q07 612 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 KIFC3Q9BVG8 833 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 AGPAT3Q9NRZ7 376 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 GIMAP4Q9NUV9 329 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 KLHL11Q9NVR0 708 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 LGALS13Q9UHV8 139 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 TRPC5Q9UL62 973 aaPredicted RBP9.63□□□□□ -0.87
RPGR-202ENST00000339363 A8MU76 341 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 PSMD12O00232 456 aaPredicted RBP9.63□□□□□ -0.87
RPGR-202ENST00000339363 TAF4O00268 1085 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 KPNA4O00629 521 aaPredicted RBP9.63□□□□□ -0.87
RPGR-202ENST00000339363 UGT1A9O60656 530 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 ZC3H11AO75152 810 aaKnown RBP eCLIP9.63□□□□□ -0.87
RPGR-202ENST00000339363 SIN3BO75182 1162 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 CRTAMO95727 393 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 ALAS1P13196 640 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 UGT1A6P19224 532 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 TCN1P20061 433 aaPredicted RBP9.63□□□□□ -0.87
RPGR-202ENST00000339363 MUTP22033 750 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 UGT1A1P22309 533 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 UGT1A4P22310 534 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 UGT1A3P35503 534 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 UGT1A5P35504 534 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 XIAPP98170 497 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 KRT76Q01546 638 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 SPIDRQ14159 915 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 ASPRV1Q53RT3 343 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 HPS6Q86YV9 775 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 ZNF786Q8N393 782 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 RNF148Q8N7C7 305 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 CATSPER1Q8NEC5 780 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 TRPV6Q9H1D0 765 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 EPB41L1Q9H4G0 881 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 UGT1A7Q9HAW7 530 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 UGT1A10Q9HAW8 530 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 UGT1A8Q9HAW9 530 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 ZNF287Q9HBT7 754 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 GPRC5CQ9NQ84 441 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 AASDHPPTQ9NRN7 309 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 LRRC4BQ9NT99 713 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 DNAJB4Q9UDY4 337 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 DNM3Q9UQ16 869 aa9.63□□□□□ -0.87
RPGR-202ENST00000339363 GAKO14976 1311 aa9.62□□□□□ -0.87
RPGR-202ENST00000339363 COL14A1Q05707 1796 aaKnown RBP9.62□□□□□ -0.87
RPGR-202ENST00000339363 IGLV3-22A0A075B6J6 115 aa9.62□□□□□ -0.87
RPGR-202ENST00000339363 PRPF4O43172 522 aaKnown RBP eCLIP9.62□□□□□ -0.871e-6■■■■□ 22.4
RPGR-202ENST00000339363 ZMPSTE24O75844 475 aa9.62□□□□□ -0.87
RPGR-202ENST00000339363 EEF1B2P24534 225 aaKnown RBP9.62□□□□□ -0.87
RPGR-202ENST00000339363 MSX2P35548 267 aaPredicted RBP9.62□□□□□ -0.87
RPGR-202ENST00000339363 IREB2P48200 963 aaKnown RBP9.62□□□□□ -0.87
RPGR-202ENST00000339363 MXI1P50539 228 aa9.62□□□□□ -0.87
RPGR-202ENST00000339363 TPTEP56180 551 aa9.62□□□□□ -0.87
RPGR-202ENST00000339363 CYP2A13Q16696 494 aa9.62□□□□□ -0.87
RPGR-202ENST00000339363 SYCP2LQ5T4T6 812 aa9.62□□□□□ -0.87
RPGR-202ENST00000339363 PRR5LQ6MZQ0 368 aa9.62□□□□□ -0.87
RPGR-202ENST00000339363 C11orf74Q86VG3 221 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms