RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 CLSTN3Q9BQT9 956 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 ZWILCHQ9H900 591 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 NGRNQ9NPE2 291 aaKnown RBP15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 TTC7AQ9ULT0 858 aaPredicted RBP15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 USP3Q9Y6I4 520 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 MYO16Q9Y6X6 1858 aa15.43■□□□□ 0.06
CDK5RAP3-201ENST00000338399 PLXNA4Q9HCM2 1894 aa15.43■□□□□ 0.06
CDK5RAP3-201ENST00000338399 SART1O43290 800 aaKnown RBP15.43■□□□□ 0.06
CDK5RAP3-201ENST00000338399 URODP06132 367 aa15.43■□□□□ 0.06
CDK5RAP3-201ENST00000338399 DESP17661 470 aa15.43■□□□□ 0.06
CDK5RAP3-201ENST00000338399 DNAJB2P25686 324 aa15.43■□□□□ 0.06
CDK5RAP3-201ENST00000338399 PCK1P35558 622 aa15.43■□□□□ 0.06
CDK5RAP3-201ENST00000338399 KRT17Q04695 432 aa15.43■□□□□ 0.06
CDK5RAP3-201ENST00000338399 DUSP4Q13115 394 aa15.43■□□□□ 0.06
CDK5RAP3-201ENST00000338399 LLGL1Q15334 1064 aa15.43■□□□□ 0.06
CDK5RAP3-201ENST00000338399 LONRF2Q1L5Z9 754 aa15.43■□□□□ 0.06
CDK5RAP3-201ENST00000338399 SMTNL2Q2TAL5 461 aa15.43■□□□□ 0.06
CDK5RAP3-201ENST00000338399 DCAF6Q58WW2 860 aa15.43■□□□□ 0.06
CDK5RAP3-201ENST00000338399 KCNT1Q5JUK3 1230 aa15.43■□□□□ 0.06
CDK5RAP3-201ENST00000338399 BHLHA9Q7RTU4 235 aa15.43■□□□□ 0.06
CDK5RAP3-201ENST00000338399 ADAT2Q7Z6V5 191 aaKnown RBP15.43■□□□□ 0.06
CDK5RAP3-201ENST00000338399 SP7Q8TDD2 431 aaPredicted RBP15.43■□□□□ 0.06
CDK5RAP3-201ENST00000338399 C2orf15Q8WU43 125 aaKnown RBP15.43■□□□□ 0.06
CDK5RAP3-201ENST00000338399 UBXN4Q92575 508 aa15.43■□□□□ 0.06
CDK5RAP3-201ENST00000338399 ACSF2Q96CM8 615 aaPredicted RBP15.43■□□□□ 0.06
CDK5RAP3-201ENST00000338399 SEPT5Q99719 369 aaPredicted RBP15.43■□□□□ 0.06
CDK5RAP3-201ENST00000338399 PLVAPQ9BX97 442 aa15.43■□□□□ 0.06
CDK5RAP3-201ENST00000338399 AP1M1Q9BXS5 423 aa15.43■□□□□ 0.06
CDK5RAP3-201ENST00000338399 ADAM33Q9BZ11 813 aa15.43■□□□□ 0.06
CDK5RAP3-201ENST00000338399 POPDC2Q9HBU9 364 aa15.43■□□□□ 0.06
CDK5RAP3-201ENST00000338399 RBM12Q9NTZ6 932 aaKnown RBP15.43■□□□□ 0.06
CDK5RAP3-201ENST00000338399 USP18Q9UMW8 372 aa15.43■□□□□ 0.06
CDK5RAP3-201ENST00000338399 ZRANB2O95218 330 aaKnown RBP eCLIP15.42■□□□□ 0.067e-19■□□□□ 10
CDK5RAP3-201ENST00000338399 TRUB2O95900 331 aaKnown RBP15.42■□□□□ 0.06
CDK5RAP3-201ENST00000338399 LTFP02788 710 aa15.42■□□□□ 0.06
CDK5RAP3-201ENST00000338399 KRT1P04264 644 aa15.42■□□□□ 0.06
CDK5RAP3-201ENST00000338399 FYNP06241 537 aa15.42■□□□□ 0.06
CDK5RAP3-201ENST00000338399 HAPLN1P10915 354 aaPredicted RBP15.42■□□□□ 0.06
CDK5RAP3-201ENST00000338399 NOS2P35228 1153 aa15.42■□□□□ 0.06
CDK5RAP3-201ENST00000338399 SYPL2Q5VXT5 272 aa15.42■□□□□ 0.06
CDK5RAP3-201ENST00000338399 SCYL2Q6P3W7 929 aa15.42■□□□□ 0.06
CDK5RAP3-201ENST00000338399 POLNQ7Z5Q5 900 aa15.42■□□□□ 0.06
CDK5RAP3-201ENST00000338399 CCDC50Q8IVM0 306 aa15.42■□□□□ 0.06
CDK5RAP3-201ENST00000338399 NUP93Q8N1F7 819 aa15.42■□□□□ 0.06
CDK5RAP3-201ENST00000338399 SCML4Q8N228 414 aa15.42■□□□□ 0.06
CDK5RAP3-201ENST00000338399 KLHL23Q8NBE8 558 aa15.42■□□□□ 0.06
CDK5RAP3-201ENST00000338399 EXD1Q8NHP7 514 aa15.42■□□□□ 0.06
CDK5RAP3-201ENST00000338399 GPR152Q8TDT2 470 aa15.42■□□□□ 0.06
CDK5RAP3-201ENST00000338399 IRGQQ8WZA9 623 aa15.42■□□□□ 0.06
CDK5RAP3-201ENST00000338399 RNF25Q96BH1 459 aaPredicted RBP15.42■□□□□ 0.06
CDK5RAP3-201ENST00000338399 SLC2A13Q96QE2 648 aa15.42■□□□□ 0.06
CDK5RAP3-201ENST00000338399 TBCBQ99426 244 aa15.42■□□□□ 0.06
CDK5RAP3-201ENST00000338399 C11orf84Q9BUA3 381 aaPredicted RBP15.42■□□□□ 0.06
CDK5RAP3-201ENST00000338399 NAALADL1Q9UQQ1 740 aa15.42■□□□□ 0.06
CDK5RAP3-201ENST00000338399 ZNF638Q14966 1978 aaKnown RBP15.42■□□□□ 0.06
CDK5RAP3-201ENST00000338399 PI4K2BG5E9Z4 385 aa15.42■□□□□ 0.06
CDK5RAP3-201ENST00000338399 CAPN9O14815 690 aa15.42■□□□□ 0.06
CDK5RAP3-201ENST00000338399 KRT7P08729 469 aa15.42■□□□□ 0.06
CDK5RAP3-201ENST00000338399 SULT1E1P49888 294 aa15.42■□□□□ 0.06
CDK5RAP3-201ENST00000338399 HDAC4P56524 1084 aa15.42■□□□□ 0.06
CDK5RAP3-201ENST00000338399 ITIH3Q06033 890 aa15.42■□□□□ 0.06
CDK5RAP3-201ENST00000338399 SMC1AQ14683 1233 aaKnown RBP15.42■□□□□ 0.06
CDK5RAP3-201ENST00000338399 SLC25A52Q3SY17 297 aa15.42■□□□□ 0.06
CDK5RAP3-201ENST00000338399 C9orf50Q5SZB4 431 aa15.42■□□□□ 0.06
CDK5RAP3-201ENST00000338399 RASIP1Q5U651 963 aa15.42■□□□□ 0.06
CDK5RAP3-201ENST00000338399 CENPIQ92674 756 aaPredicted RBP15.42■□□□□ 0.06
CDK5RAP3-201ENST00000338399 PEBP4Q96S96 227 aa15.42■□□□□ 0.06
CDK5RAP3-201ENST00000338399 MRPL17Q9NRX2 175 aaKnown RBP15.42■□□□□ 0.06
CDK5RAP3-201ENST00000338399 DDX56Q9NY93 547 aaKnown RBP15.42■□□□□ 0.06
CDK5RAP3-201ENST00000338399 GREB1Q4ZG55 1949 aa15.41■□□□□ 0.06
CDK5RAP3-201ENST00000338399 KRIT1O00522 736 aa15.41■□□□□ 0.06
CDK5RAP3-201ENST00000338399 PRPSAP2O60256 369 aa15.41■□□□□ 0.06
CDK5RAP3-201ENST00000338399 NCAM1P13591 858 aa15.41■□□□□ 0.06
CDK5RAP3-201ENST00000338399 ATXN1P54253 815 aaKnown RBP15.41■□□□□ 0.06
CDK5RAP3-201ENST00000338399 PITX1P78337 314 aaPredicted RBP15.41■□□□□ 0.06
CDK5RAP3-201ENST00000338399 ODF2Q5BJF6 829 aa15.41■□□□□ 0.06
CDK5RAP3-201ENST00000338399 BSPRYQ5W0U4 402 aa15.41■□□□□ 0.06
CDK5RAP3-201ENST00000338399 SLC13A5Q86YT5 568 aaPredicted RBP15.41■□□□□ 0.06
CDK5RAP3-201ENST00000338399 RCOR2Q8IZ40 523 aa15.41■□□□□ 0.06
CDK5RAP3-201ENST00000338399 RAPGEF5Q92565 580 aa15.41■□□□□ 0.06
CDK5RAP3-201ENST00000338399 EDEM1Q92611 657 aa15.41■□□□□ 0.06
CDK5RAP3-201ENST00000338399 NAP1L3Q99457 506 aaPredicted RBP15.41■□□□□ 0.06
CDK5RAP3-201ENST00000338399 CALCOCO1Q9P1Z2 691 aa15.41■□□□□ 0.06
CDK5RAP3-201ENST00000338399 STAP1Q9ULZ2 295 aa15.41■□□□□ 0.06
CDK5RAP3-201ENST00000338399 TCRBV7S2A1N4TA0A589 114 aa15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 RARAP10276 462 aa15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 CA8P35219 290 aa15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 USP46P62068 366 aa15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 ELF2Q15723 593 aa15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 CYP4V2Q6ZWL3 525 aaPredicted RBP15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 STRADAQ7RTN6 431 aa15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 ANKS1BQ7Z6G8 1248 aa15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 ZNF461Q8TAF7 563 aa15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 HSPH1Q92598 858 aa15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 NT5C3BQ969T7 300 aa15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 RBM41Q96IZ5 413 aaKnown RBP15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 SLITRK1Q96PX8 696 aa15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 NPY6RQ99463 290 aa15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 NCAPGQ9BPX3 1015 aa15.4■□□□□ 0.06
CDK5RAP3-201ENST00000338399 ZBP1Q9H171 429 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms