RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 ZNF276Q8N554 614 aa12.51□□□□□ -0.41
SPTLC1-202ENST00000337841 SPOCK2Q92563 424 aa12.51□□□□□ -0.41
SPTLC1-202ENST00000337841 SMARCD2Q92925 531 aa12.51□□□□□ -0.41
SPTLC1-202ENST00000337841 NXPE3Q969Y0 559 aa12.51□□□□□ -0.41
SPTLC1-202ENST00000337841 E2F7Q96AV8 911 aa12.51□□□□□ -0.41
SPTLC1-202ENST00000337841 CDK5RAP1Q96SZ6 601 aaKnown RBP12.51□□□□□ -0.41
SPTLC1-202ENST00000337841 PCDHB18PQ96TA0 734 aa12.51□□□□□ -0.41
SPTLC1-202ENST00000337841 DNAJC7Q99615 494 aa12.51□□□□□ -0.41
SPTLC1-202ENST00000337841 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.51□□□□□ -0.41
SPTLC1-202ENST00000337841 TRIM62Q9BVG3 475 aa12.51□□□□□ -0.41
SPTLC1-202ENST00000337841 NACA2Q9H009 215 aa12.51□□□□□ -0.41
SPTLC1-202ENST00000337841 IMPACTQ9P2X3 320 aa12.51□□□□□ -0.41
SPTLC1-202ENST00000337841 LIMD1Q9UGP4 676 aa12.51□□□□□ -0.41
SPTLC1-202ENST00000337841 CYTH4Q9UIA0 394 aa12.51□□□□□ -0.41
SPTLC1-202ENST00000337841 ATG2AQ2TAZ0 1938 aa12.5□□□□□ -0.41
SPTLC1-202ENST00000337841 SZT2Q5T011 3432 aa12.5□□□□□ -0.41
SPTLC1-202ENST00000337841 A0A1W2PQH9 124 aa12.5□□□□□ -0.41
SPTLC1-202ENST00000337841 C2CD4DB7Z1M9 353 aa12.5□□□□□ -0.41
SPTLC1-202ENST00000337841 LOC730098B7Z3J9 87 aa12.5□□□□□ -0.41
SPTLC1-202ENST00000337841 E5RJQ4 531 aa12.5□□□□□ -0.41
SPTLC1-202ENST00000337841 DPYSL4O14531 572 aa12.5□□□□□ -0.41
SPTLC1-202ENST00000337841 MFAP3LO75121 409 aa12.5□□□□□ -0.41
SPTLC1-202ENST00000337841 GABBR2O75899 941 aa12.5□□□□□ -0.41
SPTLC1-202ENST00000337841 GZMAP12544 262 aa12.5□□□□□ -0.41
SPTLC1-202ENST00000337841 UNGP13051 313 aaPredicted RBP12.5□□□□□ -0.41
SPTLC1-202ENST00000337841 RARGP13631 454 aa12.5□□□□□ -0.41
SPTLC1-202ENST00000337841 ATP5C1P36542 298 aaKnown RBP12.5□□□□□ -0.41
SPTLC1-202ENST00000337841 MRE11P49959 708 aa12.5□□□□□ -0.41
SPTLC1-202ENST00000337841 TUBP50607 506 aa12.5□□□□□ -0.41
SPTLC1-202ENST00000337841 DAOAP59103 153 aa12.5□□□□□ -0.41
SPTLC1-202ENST00000337841 NOMO3P69849 1222 aa12.5□□□□□ -0.41
SPTLC1-202ENST00000337841 ZNF268Q14587 947 aaPredicted RBP12.5□□□□□ -0.41
SPTLC1-202ENST00000337841 ARID5BQ14865 1188 aa12.5□□□□□ -0.41
SPTLC1-202ENST00000337841 FAM78AQ5JUQ0 283 aa12.5□□□□□ -0.41
SPTLC1-202ENST00000337841 BSPRYQ5W0U4 402 aa12.5□□□□□ -0.41
SPTLC1-202ENST00000337841 ACAD10Q6JQN1 1059 aa12.5□□□□□ -0.41
SPTLC1-202ENST00000337841 MTSS1LQ765P7 747 aa12.5□□□□□ -0.41
SPTLC1-202ENST00000337841 RSRC2Q7L4I2 434 aaKnown RBP12.5□□□□□ -0.41
SPTLC1-202ENST00000337841 SCD5Q86SK9 330 aa12.5□□□□□ -0.41
SPTLC1-202ENST00000337841 ARID3BQ8IVW6 561 aaPredicted RBP12.5□□□□□ -0.41
SPTLC1-202ENST00000337841 ZSCAN18Q8TBC5 510 aaPredicted RBP12.5□□□□□ -0.41
SPTLC1-202ENST00000337841 RNF139Q8WU17 664 aa12.5□□□□□ -0.41
SPTLC1-202ENST00000337841 NDRG1Q92597 394 aaKnown RBP12.5□□□□□ -0.41
SPTLC1-202ENST00000337841 ANP32BQ92688 251 aaKnown RBP12.5□□□□□ -0.41
SPTLC1-202ENST00000337841 ZSWIM3Q96MP5 696 aa12.5□□□□□ -0.41
SPTLC1-202ENST00000337841 CPXM1Q96SM3 734 aa12.5□□□□□ -0.41
SPTLC1-202ENST00000337841 CYP2S1Q96SQ9 504 aa12.5□□□□□ -0.41
SPTLC1-202ENST00000337841 ZFP14Q9HCL3 533 aa12.5□□□□□ -0.41
SPTLC1-202ENST00000337841 ABCC13Q9NSE7 274 aa12.5□□□□□ -0.41
SPTLC1-202ENST00000337841 ABHD10Q9NUJ1 306 aa12.5□□□□□ -0.41
SPTLC1-202ENST00000337841 IGSF9Q9P2J2 1179 aa12.5□□□□□ -0.41
SPTLC1-202ENST00000337841 C2orf78A6NCI8 922 aa12.49□□□□□ -0.41
SPTLC1-202ENST00000337841 YJEFN3A6XGL0 299 aa12.49□□□□□ -0.41
SPTLC1-202ENST00000337841 E7ENQ6 273 aa12.49□□□□□ -0.41
SPTLC1-202ENST00000337841 PAPSS1O43252 624 aaPredicted RBP12.49□□□□□ -0.41
SPTLC1-202ENST00000337841 TLR5O60602 858 aa12.49□□□□□ -0.41
SPTLC1-202ENST00000337841 TADA3O75528 432 aa12.49□□□□□ -0.41
SPTLC1-202ENST00000337841 CALB1P05937 261 aa12.49□□□□□ -0.41
SPTLC1-202ENST00000337841 CKMP06732 381 aa12.49□□□□□ -0.41
SPTLC1-202ENST00000337841 GLI1P08151 1106 aa12.49□□□□□ -0.41
SPTLC1-202ENST00000337841 MMP8P22894 467 aa12.49□□□□□ -0.41
SPTLC1-202ENST00000337841 GABRB2P47870 512 aa12.49□□□□□ -0.41
SPTLC1-202ENST00000337841 YWHAZP63104 245 aaKnown RBP12.49□□□□□ -0.41
SPTLC1-202ENST00000337841 SLC6A3Q01959 620 aa12.49□□□□□ -0.41
SPTLC1-202ENST00000337841 ZP2Q05996 745 aa12.49□□□□□ -0.41
SPTLC1-202ENST00000337841 C10orf120Q5SQS8 335 aa12.49□□□□□ -0.41
SPTLC1-202ENST00000337841 STXBP5Q5T5C0 1151 aa12.49□□□□□ -0.41
SPTLC1-202ENST00000337841 E4F1Q66K89 784 aaPredicted RBP12.49□□□□□ -0.41
SPTLC1-202ENST00000337841 HGSNATQ68CP4 663 aa12.49□□□□□ -0.41
SPTLC1-202ENST00000337841 TOGARAM2Q6ZUX3 1019 aa12.49□□□□□ -0.41
SPTLC1-202ENST00000337841 PHF13Q86YI8 300 aaPredicted RBP12.49□□□□□ -0.41
SPTLC1-202ENST00000337841 CELF5Q8N6W0 485 aaKnown RBP12.49□□□□□ -0.41
SPTLC1-202ENST00000337841 ARL14EPQ8N8R7 260 aaPredicted RBP12.49□□□□□ -0.41
SPTLC1-202ENST00000337841 SLC30A5Q8TAD4 765 aa12.49□□□□□ -0.41
SPTLC1-202ENST00000337841 FAM149B1Q96BN6 582 aa12.49□□□□□ -0.41
SPTLC1-202ENST00000337841 VCPIP1Q96JH7 1222 aa12.49□□□□□ -0.41
SPTLC1-202ENST00000337841 ASB16Q96NS5 453 aa12.49□□□□□ -0.41
SPTLC1-202ENST00000337841 SYT11Q9BT88 431 aa12.49□□□□□ -0.41
SPTLC1-202ENST00000337841 DEF6Q9H4E7 631 aa12.49□□□□□ -0.41
SPTLC1-202ENST00000337841 NMUR1Q9HB89 426 aa12.49□□□□□ -0.41
SPTLC1-202ENST00000337841 TRPV4Q9HBA0 871 aa12.49□□□□□ -0.41
SPTLC1-202ENST00000337841 OLA1Q9NTK5 396 aaKnown RBP12.49□□□□□ -0.41
SPTLC1-202ENST00000337841 TDP1Q9NUW8 608 aa12.49□□□□□ -0.41
SPTLC1-202ENST00000337841 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.49□□□□□ -0.41
SPTLC1-202ENST00000337841 ADAM22Q9P0K1 906 aa12.49□□□□□ -0.41
SPTLC1-202ENST00000337841 WDR35Q9P2L0 1181 aa12.49□□□□□ -0.41
SPTLC1-202ENST00000337841 ADAMTS1Q9UHI8 967 aa12.49□□□□□ -0.41
SPTLC1-202ENST00000337841 DNMT3LQ9UJW3 386 aa12.49□□□□□ -0.41
SPTLC1-202ENST00000337841 STRIP2Q9ULQ0 834 aa12.49□□□□□ -0.41
SPTLC1-202ENST00000337841 C19orf67A6NJJ6 358 aa12.48□□□□□ -0.41
SPTLC1-202ENST00000337841 DDX3XO00571 662 aaKnown RBP eCLIP12.48□□□□□ -0.413e-7■■■■□ 23.1
SPTLC1-202ENST00000337841 NRG2O14511 850 aaPredicted RBP12.48□□□□□ -0.41
SPTLC1-202ENST00000337841 CAPN9O14815 690 aa12.48□□□□□ -0.41
SPTLC1-202ENST00000337841 COCHO43405 550 aa12.48□□□□□ -0.41
SPTLC1-202ENST00000337841 RTN2O75298 545 aa12.48□□□□□ -0.41
SPTLC1-202ENST00000337841 ECI2O75521 394 aa12.48□□□□□ -0.41
SPTLC1-202ENST00000337841 OAS1P00973 400 aaKnown RBP12.48□□□□□ -0.41
SPTLC1-202ENST00000337841 LTFP02788 710 aa12.48□□□□□ -0.41
SPTLC1-202ENST00000337841 ERBB2P04626 1255 aa12.48□□□□□ -0.41
SPTLC1-202ENST00000337841 MBL2P11226 248 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms