RNA–Protein interactions for RNA: ENST00000336328.10

CMTM1-204, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-204ENST00000336328 ZCWPW2Q504Y3 356 aa18.75■□□□□ 0.59
CMTM1-204ENST00000336328 COBLL1Q53SF7 1204 aa18.75■□□□□ 0.59
CMTM1-204ENST00000336328 ZNF658Q5TYW1 1059 aaPredicted RBP18.75■□□□□ 0.59
CMTM1-204ENST00000336328 TADA2BQ86TJ2 420 aa18.75■□□□□ 0.59
CMTM1-204ENST00000336328 FMR1NBQ8N0W7 255 aaPredicted RBP18.75■□□□□ 0.59
CMTM1-204ENST00000336328 FBXL13Q8NEE6 735 aa18.75■□□□□ 0.59
CMTM1-204ENST00000336328 NETO1Q8TDF5 533 aa18.75■□□□□ 0.59
CMTM1-204ENST00000336328 USP33Q8TEY7 942 aa18.75■□□□□ 0.59
CMTM1-204ENST00000336328 ELMO3Q96BJ8 720 aa18.75■□□□□ 0.59
CMTM1-204ENST00000336328 ZC3H10Q96K80 434 aaKnown RBP18.75■□□□□ 0.59
CMTM1-204ENST00000336328 MMRN2Q9H8L6 949 aa18.75■□□□□ 0.59
CMTM1-204ENST00000336328 PARD6AQ9NPB6 346 aa18.75■□□□□ 0.59
CMTM1-204ENST00000336328 FAM49BQ9NUQ9 324 aa18.75■□□□□ 0.59
CMTM1-204ENST00000336328 GMIPQ9P107 970 aa18.75■□□□□ 0.59
CMTM1-204ENST00000336328 SCML2Q9UQR0 700 aa18.75■□□□□ 0.59
CMTM1-204ENST00000336328 K7EQS6 105 aa18.74■□□□□ 0.59
CMTM1-204ENST00000336328 TLR5O60602 858 aa18.74■□□□□ 0.59
CMTM1-204ENST00000336328 CILPO75339 1184 aa18.74■□□□□ 0.59
CMTM1-204ENST00000336328 BEST1O76090 585 aa18.74■□□□□ 0.59
CMTM1-204ENST00000336328 ALDH1A2O94788 518 aa18.74■□□□□ 0.59
CMTM1-204ENST00000336328 RHOBTB1O94844 696 aa18.74■□□□□ 0.59
CMTM1-204ENST00000336328 ADH5P11766 374 aa18.74■□□□□ 0.59
CMTM1-204ENST00000336328 GRIA2P42262 883 aa18.74■□□□□ 0.59
CMTM1-204ENST00000336328 TNFRSF4P43489 277 aa18.74■□□□□ 0.59
CMTM1-204ENST00000336328 ATXN1P54253 815 aaKnown RBP18.74■□□□□ 0.59
CMTM1-204ENST00000336328 SLC8A3P57103 927 aa18.74■□□□□ 0.59
CMTM1-204ENST00000336328 FKBP3Q00688 224 aaKnown RBP18.74■□□□□ 0.59
CMTM1-204ENST00000336328 USP39Q53GS9 565 aaKnown RBP18.74■□□□□ 0.59
CMTM1-204ENST00000336328 NAIF1Q69YI7 327 aaPredicted RBP18.74■□□□□ 0.59
CMTM1-204ENST00000336328 ZMIZ2Q8NF64 920 aa18.74■□□□□ 0.59
CMTM1-204ENST00000336328 TSTD1Q8NFU3 115 aa18.74■□□□□ 0.59
CMTM1-204ENST00000336328 HEXIM2Q96MH2 286 aaKnown RBP18.74■□□□□ 0.59
CMTM1-204ENST00000336328 TIGD1Q96MW7 591 aa18.74■□□□□ 0.59
CMTM1-204ENST00000336328 CCSER2Q9H7U1 834 aa18.74■□□□□ 0.59
CMTM1-204ENST00000336328 RAB20Q9NX57 234 aa18.74■□□□□ 0.59
CMTM1-204ENST00000336328 LSM7Q9UK45 103 aaKnown RBP18.74■□□□□ 0.59
CMTM1-204ENST00000336328 PCDHGA5Q9Y5G8 931 aa18.74■□□□□ 0.59
CMTM1-204ENST00000336328 MYOFQ9NZM1 2061 aa18.73■□□□□ 0.59
CMTM1-204ENST00000336328 CD58P19256 250 aa18.73■□□□□ 0.59
CMTM1-204ENST00000336328 ACO1P21399 889 aaKnown RBP18.73■□□□□ 0.59
CMTM1-204ENST00000336328 MXI1P50539 228 aa18.73■□□□□ 0.59
CMTM1-204ENST00000336328 DGKEP52429 567 aa18.73■□□□□ 0.59
CMTM1-204ENST00000336328 ORC1Q13415 861 aa18.73■□□□□ 0.59
CMTM1-204ENST00000336328 PNOCQ13519 176 aa18.73■□□□□ 0.59
CMTM1-204ENST00000336328 STIM1Q13586 685 aa18.73■□□□□ 0.59
CMTM1-204ENST00000336328 ELF2Q15723 593 aa18.73■□□□□ 0.59
CMTM1-204ENST00000336328 C2orf27AQ580R0 203 aa18.73■□□□□ 0.59
CMTM1-204ENST00000336328 PRR23CQ6ZRP0 262 aa18.73■□□□□ 0.59
CMTM1-204ENST00000336328 CLEC20AQ6ZU45 233 aa18.73■□□□□ 0.59
CMTM1-204ENST00000336328 HTR3DQ70Z44 454 aa18.73■□□□□ 0.59
CMTM1-204ENST00000336328 KCNV2Q8TDN2 545 aa18.73■□□□□ 0.59
CMTM1-204ENST00000336328 EZH1Q92800 747 aaPredicted RBP18.73■□□□□ 0.59
CMTM1-204ENST00000336328 SMARCE1Q969G3 411 aa18.73■□□□□ 0.59
CMTM1-204ENST00000336328 HHIPQ96QV1 700 aa18.73■□□□□ 0.59
CMTM1-204ENST00000336328 CDK5RAP1Q96SZ6 601 aaKnown RBP18.73■□□□□ 0.59
CMTM1-204ENST00000336328 DUSP16Q9BY84 665 aa18.73■□□□□ 0.59
CMTM1-204ENST00000336328 UBXN6Q9BZV1 441 aa18.73■□□□□ 0.59
CMTM1-204ENST00000336328 APOBEC3GQ9HC16 384 aaKnown RBP18.73■□□□□ 0.59
CMTM1-204ENST00000336328 CYLDQ9NQC7 956 aa18.73■□□□□ 0.59
CMTM1-204ENST00000336328 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.73■□□□□ 0.599e-12■■■■■ 149.1
CMTM1-204ENST00000336328 ARHGEF4Q9NR80 690 aa18.73■□□□□ 0.59
CMTM1-204ENST00000336328 HMGXB4Q9UGU5 601 aa18.73■□□□□ 0.59
CMTM1-204ENST00000336328 MMP17Q9ULZ9 603 aa18.73■□□□□ 0.59
CMTM1-204ENST00000336328 SLC16A3O15427 465 aaKnown RBP18.72■□□□□ 0.59
CMTM1-204ENST00000336328 KAT7O95251 611 aa18.72■□□□□ 0.59
CMTM1-204ENST00000336328 PPP1R2P41236 205 aa18.72■□□□□ 0.59
CMTM1-204ENST00000336328 PRCPP42785 496 aa18.72■□□□□ 0.59
CMTM1-204ENST00000336328 PLA2G4AP47712 749 aa18.72■□□□□ 0.59
CMTM1-204ENST00000336328 EOGTQ5NDL2 527 aa18.72■□□□□ 0.59
CMTM1-204ENST00000336328 LY6G5CQ5SRR4 150 aa18.72■□□□□ 0.59
CMTM1-204ENST00000336328 KLHDC10Q6PID8 442 aa18.72■□□□□ 0.59
CMTM1-204ENST00000336328 ZNF276Q8N554 614 aa18.72■□□□□ 0.59
CMTM1-204ENST00000336328 C12orf50Q8NA57 414 aaPredicted RBP18.72■□□□□ 0.59
CMTM1-204ENST00000336328 ZFRQ96KR1 1074 aaKnown RBP18.72■□□□□ 0.59
CMTM1-204ENST00000336328 SPHK2Q9NRA0 654 aa18.72■□□□□ 0.59
CMTM1-204ENST00000336328 DEC1Q9P2X7 70 aa18.72■□□□□ 0.59
CMTM1-204ENST00000336328 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.72■□□□□ 0.59
CMTM1-204ENST00000336328 FRYLO94915 3013 aa18.72■□□□□ 0.59
CMTM1-204ENST00000336328 EPN2O95208 641 aa18.71■□□□□ 0.59
CMTM1-204ENST00000336328 ZNF806P0C7X5 589 aa18.71■□□□□ 0.59
CMTM1-204ENST00000336328 RALAP11233 206 aa18.71■□□□□ 0.59
CMTM1-204ENST00000336328 SLC6A11P48066 632 aa18.71■□□□□ 0.59
CMTM1-204ENST00000336328 SEC13P55735 322 aa18.71■□□□□ 0.59
CMTM1-204ENST00000336328 YWHAEP62258 255 aaKnown RBP18.71■□□□□ 0.59
CMTM1-204ENST00000336328 LRRC63Q05C16 580 aa18.71■□□□□ 0.59
CMTM1-204ENST00000336328 CRY1Q16526 586 aa18.71■□□□□ 0.59
CMTM1-204ENST00000336328 GAB4Q2WGN9 574 aa18.71■□□□□ 0.59
CMTM1-204ENST00000336328 TCERG1LQ5VWI1 586 aa18.71■□□□□ 0.59
CMTM1-204ENST00000336328 TRMT11Q7Z4G4 463 aaKnown RBP18.71■□□□□ 0.59
CMTM1-204ENST00000336328 KBTBD6Q86V97 674 aa18.71■□□□□ 0.59
CMTM1-204ENST00000336328 ELOA2Q8IYF1 753 aaPredicted RBP18.71■□□□□ 0.59
CMTM1-204ENST00000336328 DDX1Q92499 740 aaKnown RBP18.71■□□□□ 0.59
CMTM1-204ENST00000336328 TWNKQ96RR1 684 aa18.71■□□□□ 0.59
CMTM1-204ENST00000336328 ARRDC1-AS1Q9H2J1 176 aa18.71■□□□□ 0.59
CMTM1-204ENST00000336328 POLMQ9NP87 494 aaPredicted RBP18.71■□□□□ 0.59
CMTM1-204ENST00000336328 WDR35Q9P2L0 1181 aa18.71■□□□□ 0.59
CMTM1-204ENST00000336328 DNMT3LQ9UJW3 386 aa18.71■□□□□ 0.59
CMTM1-204ENST00000336328 MYO18AQ92614 2054 aaKnown RBP18.7■□□□□ 0.58
CMTM1-204ENST00000336328 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.7■□□□□ 0.58
CMTM1-204ENST00000336328 TBC1D3BA6NDS4 549 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms