RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 SEMA3AQ14563 771 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 SEPT2Q15019 361 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 CRY1Q16526 586 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 RALGPS1Q5JS13 557 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 HYIQ5T013 277 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 VWA5B1Q5TIE3 1220 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 SLFN13Q68D06 897 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 KIAA1161Q6NSJ0 714 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 JMJD6Q6NYC1 403 aaPredicted RBP1.72□□□□□ -2.13
LINC00643-201ENST00000334389 TMTC2Q8N394 836 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 MINDY1Q8N5J2 469 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 MYCBPAPQ8TBZ2 947 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 ADAMTS17Q8TE56 1095 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 THAP3Q8WTV1 239 aaPredicted RBP1.72□□□□□ -2.13
LINC00643-201ENST00000334389 FAM222BQ8WU58 562 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 CRBNQ96SW2 442 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 ZFYVE21Q9BQ24 234 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 C17orf62Q9BQA9 187 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 DSCC1Q9BVC3 393 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 PPP1R12CQ9BZL4 782 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 DCLK3Q9C098 648 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 BRINP2Q9C0B6 783 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 TSHZ2Q9NRE2 1034 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 TRPS1Q9UHF7 1281 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 RAXQ9Y2V3 346 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 PRKAB1Q9Y478 270 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 NUB1Q9Y5A7 615 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 FRAS1Q86XX4 4008 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 EPG5Q9HCE0 2579 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 CCDC195A0A1B0GUA6 201 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 A0A1B0GVC2 190 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 A0A1W2PQ67 120 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 DCDC2BA2VCK2 349 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 FAM157AC9JC47 383 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 E9PSI1 815 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 H3BQ06 376 aaPredicted RBP1.71□□□□□ -2.14
LINC00643-201ENST00000334389 PMM2O15305 246 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 TEX28O15482 410 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 OPA1O60313 960 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 FZD6O60353 706 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 BRINP1O60477 761 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 MGEA5O60502 916 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 GREM1O60565 184 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 TDP2O95551 362 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 MLYCDO95822 493 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 PAK4O96013 591 aaPredicted RBP1.71□□□□□ -2.14
LINC00643-201ENST00000334389 ADH1CP00326 375 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 MT-CO3P00414 261 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 IFNA2P01563 188 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 ALDH2P05091 517 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 CSF3P09919 207 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 HAPLN1P10915 354 aaPredicted RBP1.71□□□□□ -2.14
LINC00643-201ENST00000334389 AKR1B1P15121 316 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 PDE6AP16499 860 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 BMP7P18075 431 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 BDNFP23560 247 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 HTR7P34969 479 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 ETFBP38117 255 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 CHRNA4P43681 627 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 ME1P48163 572 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 CSNK1DP48730 415 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 EFNA5P52803 228 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 GAD2Q05329 585 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 FAM160A1Q05DH4 1040 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 GRIK2Q13002 908 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 TFDP1Q14186 410 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 EIF2S3LQ2VIR3 472 aaKnown RBP1.71□□□□□ -2.14
LINC00643-201ENST00000334389 C3orf36Q3SXR2 165 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 IZUMO3Q5VZ72 239 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 HEPHL1Q6MZM0 1159 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 FUT10Q6P4F1 479 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 PAMR1Q6UXH9 720 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 RBM44Q6ZP01 1051 aaKnown RBP1.71□□□□□ -2.14
LINC00643-201ENST00000334389 ARHGEF18Q6ZSZ5 1173 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 GAREM2Q75VX8 874 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 TADA2BQ86TJ2 420 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 SYVN1Q86TM6 617 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 EXOC6Q8TAG9 804 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 SHKBP1Q8TBC3 707 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 ASB5Q8WWX0 329 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 CASKIN2Q8WXE0 1202 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 PIWIL1Q96J94 861 aaKnown RBP1.71□□□□□ -2.14
LINC00643-201ENST00000334389 TAAR9Q96RI9 348 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 MCCC1Q96RQ3 725 aaPredicted RBP1.71□□□□□ -2.14
LINC00643-201ENST00000334389 PSD2Q9BQI7 771 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 MXRA8Q9BRK3 442 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 CEP44Q9C0F1 390 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 SMOC2Q9H3U7 446 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 CYP4F12Q9HCS2 524 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 RIC8AQ9NPQ8 531 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 PRMT7Q9NVM4 692 aaPredicted RBP1.71□□□□□ -2.14
LINC00643-201ENST00000334389 RIPK3Q9Y572 518 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 ARHGEF17Q96PE2 2063 aaPredicted RBP1.71□□□□□ -2.14
LINC00643-201ENST00000334389 TNXBP22105 4242 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 VPS13BQ7Z7G8 4022 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 EME2A4GXA9 379 aaPredicted RBP1.71□□□□□ -2.14
LINC00643-201ENST00000334389 HIDE1A8MVS5 230 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 WASH3PC4AMC7 463 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 CLDN34H7C241 214 aa1.71□□□□□ -2.14
LINC00643-201ENST00000334389 XPOTO43592 962 aaKnown RBP1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms