RNA–Protein interactions for RNA: ENST00000332303.5

NSMCE3-201, Transcript of NSE3 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 BASIC

Gene NSMCE3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE3-201ENST00000332303 ZNF280DQ6N043 979 aa17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 NIPA1Q7RTP0 329 aa17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 ZNF333Q96JL9 665 aa17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 CCT7Q99832 543 aa17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 ASB7Q9H672 318 aa17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 ITGA11Q9UKX5 1188 aa17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 F8W810 466 aa17.11■□□□□ 0.33
NSMCE3-201ENST00000332303 M0R3G1 203 aa17.11■□□□□ 0.33
NSMCE3-201ENST00000332303 KPNA6O60684 536 aa17.11■□□□□ 0.33
NSMCE3-201ENST00000332303 INSRRP14616 1297 aa17.11■□□□□ 0.33
NSMCE3-201ENST00000332303 SOAT1P35610 550 aa17.11■□□□□ 0.33
NSMCE3-201ENST00000332303 CLK1P49759 484 aaKnown RBP17.11■□□□□ 0.33
NSMCE3-201ENST00000332303 ITIH4Q14624 930 aa17.11■□□□□ 0.33
NSMCE3-201ENST00000332303 ARRDC4Q8NCT1 418 aa17.11■□□□□ 0.33
NSMCE3-201ENST00000332303 CLPBQ9H078 707 aa17.11■□□□□ 0.33
NSMCE3-201ENST00000332303 INTS13Q9NVM9 706 aa17.11■□□□□ 0.33
NSMCE3-201ENST00000332303 BARX2Q9UMQ3 279 aaPredicted RBP17.11■□□□□ 0.33
NSMCE3-201ENST00000332303 MBL2P11226 248 aaPredicted RBP17.11■□□□□ 0.33
NSMCE3-201ENST00000332303 TARSP26639 723 aaKnown RBP17.11■□□□□ 0.33
NSMCE3-201ENST00000332303 DSG3P32926 999 aa17.11■□□□□ 0.33
NSMCE3-201ENST00000332303 HSPA13P48723 471 aa17.11■□□□□ 0.33
NSMCE3-201ENST00000332303 PGM5Q15124 567 aa17.11■□□□□ 0.33
NSMCE3-201ENST00000332303 PAN2Q504Q3 1202 aaKnown RBP17.11■□□□□ 0.33
NSMCE3-201ENST00000332303 OSMRQ99650 979 aa17.11■□□□□ 0.33
NSMCE3-201ENST00000332303 NCKIPSDQ9NZQ3 722 aa17.11■□□□□ 0.33
NSMCE3-201ENST00000332303 TPST1O60507 370 aa17.11■□□□□ 0.33
NSMCE3-201ENST00000332303 WDR47O94967 919 aa17.11■□□□□ 0.33
NSMCE3-201ENST00000332303 KRT8P05787 483 aa17.11■□□□□ 0.33
NSMCE3-201ENST00000332303 PRIM2P49643 509 aa17.11■□□□□ 0.33
NSMCE3-201ENST00000332303 ZPBP2Q6X784 338 aa17.11■□□□□ 0.33
NSMCE3-201ENST00000332303 MICU2Q8IYU8 434 aa17.11■□□□□ 0.33
NSMCE3-201ENST00000332303 MCOLN2Q8IZK6 566 aa17.11■□□□□ 0.33
NSMCE3-201ENST00000332303 APBB2Q92870 758 aa17.11■□□□□ 0.33
NSMCE3-201ENST00000332303 APOL2Q9BQE5 337 aa17.11■□□□□ 0.33
NSMCE3-201ENST00000332303 IL17RBQ9NRM6 502 aa17.11■□□□□ 0.33
NSMCE3-201ENST00000332303 DDX28Q9NUL7 540 aaKnown RBP17.11■□□□□ 0.33
NSMCE3-201ENST00000332303 RUVBL2Q9Y230 463 aaKnown RBP17.11■□□□□ 0.33
NSMCE3-201ENST00000332303 SLC12A8A0AV02 714 aa17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 RGL2O15211 777 aa17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 RAP1GDS1P52306 607 aa17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 MGAT5Q09328 741 aa17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 EFEMP1Q12805 493 aa17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 DEPDC1Q5TB30 811 aa17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 SEL1L3Q68CR1 1132 aa17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 TMEM154Q6P9G4 183 aa17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 SLC35C1Q96A29 364 aa17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 TADA1Q96BN2 335 aa17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 MTMR8Q96EF0 704 aa17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 HES6Q96HZ4 224 aa17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 NMRK2Q9NPI5 230 aa17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 RRN3Q9NYV6 651 aa17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 CRTAMO95727 393 aa17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 ALOX15P16050 662 aaPredicted RBP17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 ACADSP16219 412 aa17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 TP53BP2Q13625 1128 aa17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 ARMC6Q6NXE6 501 aa17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 STRA8Q7Z7C7 330 aa17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 FAM163AQ96GL9 167 aaPredicted RBP17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 GBA2Q9HCG7 927 aaPredicted RBP17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 IARS2Q9NSE4 1012 aaKnown RBP17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 KANSL1LA0AUZ9 987 aa17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 PSMA4P25789 261 aaKnown RBP17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 TKTL1P51854 596 aa17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 OOSP2Q86WS3 158 aa17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 TATDN2Q93075 761 aa17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 ZMAT2Q96NC0 199 aaKnown RBP17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 EMILIN2Q9BXX0 1053 aa17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 CXCL11O14625 94 aa17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 ZNF268Q14587 947 aaPredicted RBP17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 NFIL3Q16649 462 aa17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 SEPT8Q92599 483 aa17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 CPB2Q96IY4 423 aa17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 PNMA5Q96PV4 448 aa17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 YIPF2Q9BWQ6 316 aa17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 PPRC1Q5VV67 1664 aaKnown RBP17.1■□□□□ 0.33
NSMCE3-201ENST00000332303 O00370 1275 aa17.09■□□□□ 0.33
NSMCE3-201ENST00000332303 URODP06132 367 aa17.09■□□□□ 0.33
NSMCE3-201ENST00000332303 SARSP49591 514 aaKnown RBP17.09■□□□□ 0.33
NSMCE3-201ENST00000332303 PMS1P54277 932 aaKnown RBP17.09■□□□□ 0.33
NSMCE3-201ENST00000332303 MAP3K7CLP57077 242 aa17.09■□□□□ 0.33
NSMCE3-201ENST00000332303 MYO1HQ8N1T3 1032 aa17.09■□□□□ 0.33
NSMCE3-201ENST00000332303 CYP2W1Q8TAV3 490 aa17.09■□□□□ 0.33
NSMCE3-201ENST00000332303 ZC4H2Q9NQZ6 224 aa17.09■□□□□ 0.33
NSMCE3-201ENST00000332303 BAZ2BQ9UIF8 2168 aaKnown RBP17.09■□□□□ 0.33
NSMCE3-201ENST00000332303 SLITRK3O94933 977 aa17.09■□□□□ 0.33
NSMCE3-201ENST00000332303 EPB42P16452 691 aa17.09■□□□□ 0.33
NSMCE3-201ENST00000332303 CASP7P55210 303 aa17.09■□□□□ 0.33
NSMCE3-201ENST00000332303 PLOD1Q02809 727 aaPredicted RBP17.09■□□□□ 0.33
NSMCE3-201ENST00000332303 OTOP1Q7RTM1 612 aa17.09■□□□□ 0.33
NSMCE3-201ENST00000332303 TRIM69Q86WT6 500 aa17.09■□□□□ 0.33
NSMCE3-201ENST00000332303 DIS3LQ8TF46 1054 aaKnown RBP17.09■□□□□ 0.33
NSMCE3-201ENST00000332303 NOD2Q9HC29 1040 aa17.09■□□□□ 0.33
NSMCE3-201ENST00000332303 V9GYQ6 96 aa17.09■□□□□ 0.33
NSMCE3-201ENST00000332303 CPA3P15088 417 aa17.09■□□□□ 0.33
NSMCE3-201ENST00000332303 RAP1GAPP47736 663 aa17.09■□□□□ 0.33
NSMCE3-201ENST00000332303 KPNA1P52294 538 aaPredicted RBP17.09■□□□□ 0.33
NSMCE3-201ENST00000332303 OAZ1P54368 228 aa17.09■□□□□ 0.33
NSMCE3-201ENST00000332303 KCNMA1Q12791 1236 aa17.09■□□□□ 0.33
NSMCE3-201ENST00000332303 CSTF3Q12996 717 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms