RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 RHBDL3P58872 404 aa21.35■■□□□ 1.01
CMTM4-201ENST00000330687 THAP11Q96EK4 314 aa21.35■■□□□ 1.01
CMTM4-201ENST00000330687 WRNIP1Q96S55 665 aa21.35■■□□□ 1.01
CMTM4-201ENST00000330687 UNC45AQ9H3U1 944 aa21.35■■□□□ 1.01
CMTM4-201ENST00000330687 CPOXP36551 454 aa21.35■■□□□ 1.01
CMTM4-201ENST00000330687 DNAJC24Q6P3W2 148 aa21.35■■□□□ 1.01
CMTM4-201ENST00000330687 DARS2Q6PI48 645 aaKnown RBP21.35■■□□□ 1.01
CMTM4-201ENST00000330687 CHSY1Q86X52 802 aa21.35■■□□□ 1.01
CMTM4-201ENST00000330687 NUP93Q8N1F7 819 aa21.35■■□□□ 1.01
CMTM4-201ENST00000330687 ATXN7L3BQ96GX2 97 aa21.35■■□□□ 1.01
CMTM4-201ENST00000330687 MRPS26Q9BYN8 205 aaKnown RBP21.35■■□□□ 1.01
CMTM4-201ENST00000330687 PIH1D1Q9NWS0 290 aaKnown RBP21.35■■□□□ 1.01
CMTM4-201ENST00000330687 THEGQ9P2T0 379 aa21.35■■□□□ 1.01
CMTM4-201ENST00000330687 SNRPAP09012 282 aaKnown RBP21.35■■□□□ 1.01
CMTM4-201ENST00000330687 C6orf183Q5T699 404 aa21.35■■□□□ 1.01
CMTM4-201ENST00000330687 PDPK2PQ6A1A2 396 aa21.35■■□□□ 1.01
CMTM4-201ENST00000330687 ZNF410Q86VK4 478 aa21.35■■□□□ 1.01
CMTM4-201ENST00000330687 TSPAN14Q8NG11 270 aa21.35■■□□□ 1.01
CMTM4-201ENST00000330687 FEZF2Q8TBJ5 459 aa21.35■■□□□ 1.01
CMTM4-201ENST00000330687 ZFRQ96KR1 1074 aaKnown RBP21.35■■□□□ 1.01
CMTM4-201ENST00000330687 TRNAU1APQ9NX07 287 aaKnown RBP21.35■■□□□ 1.01
CMTM4-201ENST00000330687 ZNF536O15090 1300 aa21.34■■□□□ 1.01
CMTM4-201ENST00000330687 CYP3A7-CYP3A51PA0A087WV96 503 aa21.34■■□□□ 1.01
CMTM4-201ENST00000330687 H7C0C1 242 aa21.34■■□□□ 1.01
CMTM4-201ENST00000330687 ADRA2BP18089 450 aa21.34■■□□□ 1.01
CMTM4-201ENST00000330687 CDH2P19022 906 aaPredicted RBP21.34■■□□□ 1.01
CMTM4-201ENST00000330687 CYP3A7P24462 503 aa21.34■■□□□ 1.01
CMTM4-201ENST00000330687 ATP5OP48047 213 aa21.34■■□□□ 1.01
CMTM4-201ENST00000330687 FASTKD1Q53R41 847 aaKnown RBP21.34■■□□□ 1.01
CMTM4-201ENST00000330687 UTS2BQ765I0 119 aa21.34■■□□□ 1.01
CMTM4-201ENST00000330687 DPH6Q7L8W6 267 aa21.34■■□□□ 1.01
CMTM4-201ENST00000330687 VTI1AQ96AJ9 217 aa21.34■■□□□ 1.01
CMTM4-201ENST00000330687 GLT8D2Q9H1C3 349 aa21.34■■□□□ 1.01
CMTM4-201ENST00000330687 RAB6BQ9NRW1 208 aa21.34■■□□□ 1.01
CMTM4-201ENST00000330687 DNAJB4Q9UDY4 337 aa21.34■■□□□ 1.01
CMTM4-201ENST00000330687 NUP98P52948 1817 aa21.34■■□□□ 1.01
CMTM4-201ENST00000330687 TMX2-CTNND1H3BSU7 103 aa21.34■■□□□ 1.01
CMTM4-201ENST00000330687 HNRNPDLO14979 420 aaKnown RBP21.34■■□□□ 1.01
CMTM4-201ENST00000330687 UNGP13051 313 aaPredicted RBP21.34■■□□□ 1.01
CMTM4-201ENST00000330687 CDKL1Q00532 357 aa21.34■■□□□ 1.01
CMTM4-201ENST00000330687 OGFOD2Q6N063 350 aa21.34■■□□□ 1.01
CMTM4-201ENST00000330687 TMEM53Q6P2H8 277 aa21.34■■□□□ 1.01
CMTM4-201ENST00000330687 MIER3Q7Z3K6 550 aa21.34■■□□□ 1.01
CMTM4-201ENST00000330687 ZC3H7BQ9UGR2 993 aaKnown RBP21.34■■□□□ 1.01
CMTM4-201ENST00000330687 PLLPQ9Y342 182 aa21.34■■□□□ 1.01
CMTM4-201ENST00000330687 SPTLC1O15269 473 aa21.33■■□□□ 1.01
CMTM4-201ENST00000330687 SNHG28P0DPA3 235 aa21.33■■□□□ 1.01
CMTM4-201ENST00000330687 PSMC3P17980 439 aa21.33■■□□□ 1.01
CMTM4-201ENST00000330687 ETFBP38117 255 aa21.33■■□□□ 1.01
CMTM4-201ENST00000330687 TFDP3Q5H9I0 405 aa21.33■■□□□ 1.01
CMTM4-201ENST00000330687 RTKN2Q8IZC4 609 aa21.33■■□□□ 1.01
CMTM4-201ENST00000330687 MZB1Q8WU39 189 aa21.33■■□□□ 1.01
CMTM4-201ENST00000330687 CDRT15Q96T59 188 aa21.33■■□□□ 1.01
CMTM4-201ENST00000330687 CORO1BQ9BR76 489 aa21.33■■□□□ 1.01
CMTM4-201ENST00000330687 CD209Q9NNX6 404 aa21.33■■□□□ 1.01
CMTM4-201ENST00000330687 PCDHB2Q9Y5E7 798 aa21.33■■□□□ 1.01
CMTM4-201ENST00000330687 IQCJ-SCHIP1C9J366 451 aaPredicted RBP21.33■■□□□ 1.01
CMTM4-201ENST00000330687 TBX3O15119 743 aa21.33■■□□□ 1.01
CMTM4-201ENST00000330687 APRTP07741 180 aa21.33■■□□□ 1.01
CMTM4-201ENST00000330687 CA8P35219 290 aa21.33■■□□□ 1.01
CMTM4-201ENST00000330687 HALP42357 657 aa21.33■■□□□ 1.01
CMTM4-201ENST00000330687 EIF2B2P49770 351 aaKnown RBP21.33■■□□□ 1.01
CMTM4-201ENST00000330687 EIF3EP60228 445 aaKnown RBP21.33■■□□□ 1.01
CMTM4-201ENST00000330687 TTC39BQ5VTQ0 682 aaPredicted RBP21.33■■□□□ 1.01
CMTM4-201ENST00000330687 PLA2G4FQ68DD2 849 aa21.33■■□□□ 1.01
CMTM4-201ENST00000330687 NXNQ6DKJ4 435 aa21.33■■□□□ 1.01
CMTM4-201ENST00000330687 KYAT3Q6YP21 454 aaKnown RBP21.33■■□□□ 1.01
CMTM4-201ENST00000330687 SLF2Q8IX21 1173 aa21.33■■□□□ 1.01
CMTM4-201ENST00000330687 BRD8Q9H0E9 1235 aa21.33■■□□□ 1.01
CMTM4-201ENST00000330687 ZDHHC7Q9NXF8 308 aa21.33■■□□□ 1.01
CMTM4-201ENST00000330687 SLC17A6Q9P2U8 582 aa21.33■■□□□ 1.01
CMTM4-201ENST00000330687 TBC1D30Q9Y2I9 924 aa21.33■■□□□ 1.01
CMTM4-201ENST00000330687 MYPNQ86TC9 1320 aa21.33■■□□□ 1
CMTM4-201ENST00000330687 TMEM221A6NGB7 291 aa21.33■■□□□ 1
CMTM4-201ENST00000330687 OCM2P0CE71 109 aa21.33■■□□□ 1
CMTM4-201ENST00000330687 OCMP0CE72 109 aaPredicted RBP21.33■■□□□ 1
CMTM4-201ENST00000330687 NFKBIAP25963 317 aa21.33■■□□□ 1
CMTM4-201ENST00000330687 SREBF1P36956 1147 aa21.33■■□□□ 1
CMTM4-201ENST00000330687 NR1H2P55055 460 aa21.33■■□□□ 1
CMTM4-201ENST00000330687 SULT2A1Q06520 285 aa21.33■■□□□ 1
CMTM4-201ENST00000330687 XKR5Q6UX68 686 aa21.33■■□□□ 1
CMTM4-201ENST00000330687 DIS3LQ8TF46 1054 aaKnown RBP21.33■■□□□ 1
CMTM4-201ENST00000330687 CD48P09326 243 aa21.32■■□□□ 1
CMTM4-201ENST00000330687 CD1EP15812 388 aa21.32■■□□□ 1
CMTM4-201ENST00000330687 ZNF24P17028 368 aa21.32■■□□□ 1
CMTM4-201ENST00000330687 HOXD12P35452 270 aa21.32■■□□□ 1
CMTM4-201ENST00000330687 KPNA1P52294 538 aaPredicted RBP21.32■■□□□ 1
CMTM4-201ENST00000330687 OXCT1P55809 520 aa21.32■■□□□ 1
CMTM4-201ENST00000330687 SNAPC2Q13487 334 aa21.32■■□□□ 1
CMTM4-201ENST00000330687 TCEAL1Q15170 157 aa21.32■■□□□ 1
CMTM4-201ENST00000330687 ABCB5Q2M3G0 1257 aa21.32■■□□□ 1
CMTM4-201ENST00000330687 NPNTQ6UXI9 565 aa21.32■■□□□ 1
CMTM4-201ENST00000330687 SLC26A11Q86WA9 606 aa21.32■■□□□ 1
CMTM4-201ENST00000330687 LRRC43Q8N309 656 aa21.32■■□□□ 1
CMTM4-201ENST00000330687 OXCT2Q9BYC2 517 aaPredicted RBP21.32■■□□□ 1
CMTM4-201ENST00000330687 ITGAXP20702 1163 aa21.32■■□□□ 1
CMTM4-201ENST00000330687 LGSNQ5TDP6 509 aa21.32■■□□□ 1
CMTM4-201ENST00000330687 SLC44A1Q8WWI5 657 aa21.32■■□□□ 1
CMTM4-201ENST00000330687 NLRP7Q8WX94 980 aa21.32■■□□□ 1
CMTM4-201ENST00000330687 TRIM11Q96F44 468 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms