RNA–Protein interactions for RNA: ENST00000329516.7

RGPD6-201, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD6, Length 7,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-201ENST00000329516 PIM2Q9P1W9 311 aa2.72□□□□□ -1.97
RGPD6-201ENST00000329516 TLN1Q9Y490 2541 aaKnown RBP2.72□□□□□ -1.97
RGPD6-201ENST00000329516 ATXN2Q99700 1313 aaKnown RBP2.71□□□□□ -1.98
RGPD6-201ENST00000329516 IQCA1LA6NCM1 817 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 TBX3O15119 743 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 ZNF821O75541 412 aaPredicted RBP2.71□□□□□ -1.98
RGPD6-201ENST00000329516 BBOX1O75936 387 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 GJB6O95452 261 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 KRT16P08779 473 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 INSRRP14616 1297 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 SLC15A1P46059 708 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 TNFAIP1Q13829 316 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 C10orf76Q5T2E6 689 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 C1orf94Q6P1W5 598 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 C19orf48Q6RUI8 117 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 POTEAQ6S8J7 498 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 CAND1Q86VP6 1230 aaKnown RBP2.71□□□□□ -1.98
RGPD6-201ENST00000329516 HERC6Q8IVU3 1022 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 NUP93Q8N1F7 819 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 CNBD1Q8NA66 436 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 OR2W6PQ8NHA6 318 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 NEK9Q8TD19 979 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 STAMBPL1Q96FJ0 436 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 SLC29A1Q99808 456 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 FOXC2Q99958 501 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 C7orf25Q9BPX7 421 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 FSD1LQ9BXM9 530 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 VPS11Q9H270 941 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 GOLGA2P5Q9HBQ8 144 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 CAPN10Q9HC96 672 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 PPANQ9NQ55 473 aaKnown RBP2.71□□□□□ -1.98
RGPD6-201ENST00000329516 DDX43Q9NXZ2 648 aaKnown RBP2.71□□□□□ -1.98
RGPD6-201ENST00000329516 SH3GLB1Q9Y371 365 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 ARHGAP21Q5T5U3 1957 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 PPP1R2P9O14990 202 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 BIRC5O15392 142 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 CFLARO15519 480 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 RNASEH1O60930 286 aaKnown RBP2.71□□□□□ -1.98
RGPD6-201ENST00000329516 BPNT1O95861 308 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 IGLV3-25P01717 112 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 TNNC2P02585 160 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 GSNP06396 782 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 ESRRAP11474 423 aaPredicted RBP2.71□□□□□ -1.98
RGPD6-201ENST00000329516 HSPA9P38646 679 aaKnown RBP2.71□□□□□ -1.98
RGPD6-201ENST00000329516 HAND2P61296 217 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 TGFB2P61812 414 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 CARTPTQ16568 116 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 ZSCAN26Q16670 478 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 LRRC23Q53EV4 343 aaPredicted RBP2.71□□□□□ -1.98
RGPD6-201ENST00000329516 CARD16Q5EG05 197 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 CFAP157Q5JU67 520 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 LDLRAD1Q5T700 205 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 SPATA1Q5VX52 437 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 KCTD11Q693B1 232 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 C14orf80Q86SX3 495 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 LEMD2Q8NC56 503 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 PTCD2Q8WV60 388 aaKnown RBP2.71□□□□□ -1.98
RGPD6-201ENST00000329516 MAIP1Q8WWC4 291 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 HDAC11Q96DB2 347 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 RNPC3Q96LT9 517 aaKnown RBP2.71□□□□□ -1.98
RGPD6-201ENST00000329516 PLIN2Q99541 437 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 SELENOSQ9BQE4 189 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 NUF2Q9BZD4 464 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 CCSER2Q9H7U1 834 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 RC3H2Q9HBD1 1191 aaKnown RBP2.71□□□□□ -1.98
RGPD6-201ENST00000329516 XAB2Q9HCS7 855 aaKnown RBP2.71□□□□□ -1.98
RGPD6-201ENST00000329516 CATSPERZQ9NTU4 200 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 THAP1Q9NVV9 213 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 ANKIB1Q9P2G1 1089 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 SEPT9Q9UHD8 586 aaPredicted RBP2.71□□□□□ -1.98
RGPD6-201ENST00000329516 ANAPC7Q9UJX3 599 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 DNAJC12Q9UKB3 198 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 FAF1Q9UNN5 650 aaPredicted RBP2.71□□□□□ -1.98
RGPD6-201ENST00000329516 USP9YO00507 2555 aaPredicted RBP2.71□□□□□ -1.98
RGPD6-201ENST00000329516 ESYT3A0FGR9 886 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 H0YC42 278 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 ANKRD28O15084 1053 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 PRPF3O43395 683 aaKnown RBP2.71□□□□□ -1.98
RGPD6-201ENST00000329516 ZBED4O75132 1171 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 HIP1RO75146 1068 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 BST2Q10589 180 aaKnown RBP2.71□□□□□ -1.98
RGPD6-201ENST00000329516 MYO1EQ12965 1108 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 C5orf22Q49AR2 442 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 XKR4Q5GH76 650 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 ERMARDQ5T6L9 678 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 PPP1R26Q5T8A7 1209 aaPredicted RBP2.71□□□□□ -1.98
RGPD6-201ENST00000329516 RAPH1Q70E73 1250 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 ZC3HAV1Q7Z2W4 902 aaKnown RBP2.71□□□□□ -1.98
RGPD6-201ENST00000329516 ECHDC2Q86YB7 292 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 C12orf50Q8NA57 414 aaPredicted RBP2.71□□□□□ -1.98
RGPD6-201ENST00000329516 AGAP11Q8TF27 550 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 RFT1Q96AA3 541 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 SMARCAD1Q9H4L7 1026 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 MYO9BQ13459 2157 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 TRIOBPQ9H2D6 2365 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 TMEM191CA6NGB0 347 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 HHLA1C9JL84 531 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 SMIM6P0DI80 62 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 AKR1B1P15121 316 aa2.71□□□□□ -1.98
RGPD6-201ENST00000329516 GNAT2P19087 354 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms